RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 HCN4Q9Y3Q4 1203 aa17.85■□□□□ 0.45
SF3A2-204ENST00000589118 SLC3A2P08195 630 aaKnown RBP17.84■□□□□ 0.45
SF3A2-204ENST00000589118 VPS53Q5VIR6 699 aa17.84■□□□□ 0.45
SF3A2-204ENST00000589118 FAM117BQ6P1L5 589 aa17.84■□□□□ 0.45
SF3A2-204ENST00000589118 ADD3Q9UEY8 706 aaKnown RBP17.84■□□□□ 0.45
SF3A2-204ENST00000589118 KIF28PB7ZC32 967 aa17.83■□□□□ 0.44
SF3A2-204ENST00000589118 TXNP10599 105 aaKnown RBP17.83■□□□□ 0.44
SF3A2-204ENST00000589118 RFC2P35250 354 aa17.83■□□□□ 0.44
SF3A2-204ENST00000589118 WDR5P61964 334 aaKnown RBP17.83■□□□□ 0.44
SF3A2-204ENST00000589118 PDE4DQ08499 809 aa17.83■□□□□ 0.44
SF3A2-204ENST00000589118 PTGISQ16647 500 aa17.83■□□□□ 0.44
SF3A2-204ENST00000589118 ZMYM1Q5SVZ6 1142 aa17.83■□□□□ 0.44
SF3A2-204ENST00000589118 SYDE2Q5VT97 1194 aa17.83■□□□□ 0.44
SF3A2-204ENST00000589118 GDF6Q6KF10 455 aaPredicted RBP17.83■□□□□ 0.44
SF3A2-204ENST00000589118 TBC1D5Q92609 795 aa17.83■□□□□ 0.44
SF3A2-204ENST00000589118 FSD1Q9BTV5 496 aa17.83■□□□□ 0.44
SF3A2-204ENST00000589118 NOD1Q9Y239 953 aa17.83■□□□□ 0.44
SF3A2-204ENST00000589118 A6NJR5 290 aa17.82■□□□□ 0.44
SF3A2-204ENST00000589118 PITPNM1O00562 1244 aa17.82■□□□□ 0.44
SF3A2-204ENST00000589118 RPS6P62753 249 aaKnown RBP17.82■□□□□ 0.44
SF3A2-204ENST00000589118 PPP2R5BQ15173 497 aa17.82■□□□□ 0.44
SF3A2-204ENST00000589118 NFRKBQ6P4R8 1299 aa17.82■□□□□ 0.44
SF3A2-204ENST00000589118 RNF207Q6ZRF8 634 aa17.82■□□□□ 0.44
SF3A2-204ENST00000589118 CHST3Q7LGC8 479 aa17.82■□□□□ 0.44
SF3A2-204ENST00000589118 ALYREFQ86V81 257 aaKnown RBP17.82■□□□□ 0.44
SF3A2-204ENST00000589118 PI4K2BQ8TCG2 481 aa17.82■□□□□ 0.44
SF3A2-204ENST00000589118 DHX38Q92620 1227 aaKnown RBP17.82■□□□□ 0.44
SF3A2-204ENST00000589118 TMEM47Q9BQJ4 181 aa17.82■□□□□ 0.44
SF3A2-204ENST00000589118 ZBED2Q9BTP6 218 aa17.82■□□□□ 0.44
SF3A2-204ENST00000589118 CPVLQ9H3G5 476 aa17.82■□□□□ 0.44
SF3A2-204ENST00000589118 DCTPP1Q9H773 170 aa17.82■□□□□ 0.44
SF3A2-204ENST00000589118 SUGCTQ9HAC7 445 aa17.82■□□□□ 0.44
SF3A2-204ENST00000589118 GPR37L1O60883 481 aa17.81■□□□□ 0.44
SF3A2-204ENST00000589118 KCNJ6P48051 423 aa17.81■□□□□ 0.44
SF3A2-204ENST00000589118 LY6KQ17RY6 165 aa17.81■□□□□ 0.44
SF3A2-204ENST00000589118 RRP12Q5JTH9 1297 aaKnown RBP17.81■□□□□ 0.44
SF3A2-204ENST00000589118 DCAF4Q8WV16 495 aa17.81■□□□□ 0.44
SF3A2-204ENST00000589118 AFG1LQ8WV93 481 aa17.81■□□□□ 0.44
SF3A2-204ENST00000589118 GPATCH3Q96I76 525 aa17.81■□□□□ 0.44
SF3A2-204ENST00000589118 TOMM22Q9NS69 142 aa17.81■□□□□ 0.44
SF3A2-204ENST00000589118 MYH7BA7E2Y1 1941 aa17.8■□□□□ 0.44
SF3A2-204ENST00000589118 PI4K2BG5E9Z4 385 aa17.8■□□□□ 0.44
SF3A2-204ENST00000589118 NBNO60934 754 aa17.8■□□□□ 0.44
SF3A2-204ENST00000589118 BFSP2Q13515 415 aa17.8■□□□□ 0.44
SF3A2-204ENST00000589118 BTNL9Q6UXG8 535 aa17.8■□□□□ 0.44
SF3A2-204ENST00000589118 KAT2BQ92831 832 aa17.8■□□□□ 0.44
SF3A2-204ENST00000589118 SIP14410 1827 aa17.79■□□□□ 0.44
SF3A2-204ENST00000589118 IL9P15248 144 aa17.79■□□□□ 0.44
SF3A2-204ENST00000589118 EDNRBP24530 442 aa17.79■□□□□ 0.44
SF3A2-204ENST00000589118 NOVP48745 357 aa17.79■□□□□ 0.44
SF3A2-204ENST00000589118 ZNF200P98182 395 aaPredicted RBP17.79■□□□□ 0.44
SF3A2-204ENST00000589118 USH1GQ495M9 461 aa17.79■□□□□ 0.44
SF3A2-204ENST00000589118 SEPT14Q6ZU15 432 aa17.79■□□□□ 0.44
SF3A2-204ENST00000589118 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.79■□□□□ 0.44
SF3A2-204ENST00000589118 SCFD2Q8WU76 684 aa17.79■□□□□ 0.44
SF3A2-204ENST00000589118 WNT8BQ93098 351 aa17.79■□□□□ 0.44
SF3A2-204ENST00000589118 LINC01553A4QN01 128 aa17.78■□□□□ 0.44
SF3A2-204ENST00000589118 BAIAP3O94812 1187 aa17.78■□□□□ 0.44
SF3A2-204ENST00000589118 GOLGA8HP0CJ92 632 aa17.78■□□□□ 0.44
SF3A2-204ENST00000589118 KCNA5P22460 613 aa17.78■□□□□ 0.44
SF3A2-204ENST00000589118 PTPN11Q06124 597 aaPredicted RBP17.78■□□□□ 0.44
SF3A2-204ENST00000589118 BRDTQ58F21 947 aaPredicted RBP17.78■□□□□ 0.44
SF3A2-204ENST00000589118 LRRC8DQ7L1W4 858 aa17.78■□□□□ 0.44
SF3A2-204ENST00000589118 TAAR1Q96RJ0 339 aa17.78■□□□□ 0.44
SF3A2-204ENST00000589118 C17orf80Q9BSJ5 609 aa17.78■□□□□ 0.44
SF3A2-204ENST00000589118 ALG1Q9BT22 464 aa17.78■□□□□ 0.44
SF3A2-204ENST00000589118 UBE2ZQ9H832 354 aaPredicted RBP17.78■□□□□ 0.44
SF3A2-204ENST00000589118 KIAA1217Q5T5P2 1943 aa17.78■□□□□ 0.44
SF3A2-204ENST00000589118 MUC6Q6W4X9 2439 aa17.77■□□□□ 0.44
SF3A2-204ENST00000589118 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.77■□□□□ 0.44
SF3A2-204ENST00000589118 NKRFO15226 690 aaKnown RBP eCLIP17.77■□□□□ 0.44
SF3A2-204ENST00000589118 SORBS3O60504 671 aa17.77■□□□□ 0.44
SF3A2-204ENST00000589118 KPNA6O60684 536 aa17.77■□□□□ 0.44
SF3A2-204ENST00000589118 MMP3P08254 477 aa17.77■□□□□ 0.44
SF3A2-204ENST00000589118 TOP1P11387 765 aaKnown RBP17.77■□□□□ 0.44
SF3A2-204ENST00000589118 SELPP16109 830 aa17.77■□□□□ 0.44
SF3A2-204ENST00000589118 HIC1Q14526 733 aa17.77■□□□□ 0.44
SF3A2-204ENST00000589118 CCDC62Q6P9F0 684 aa17.77■□□□□ 0.44
SF3A2-204ENST00000589118 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.77■□□□□ 0.44
SF3A2-204ENST00000589118 UIMC1Q96RL1 719 aa17.77■□□□□ 0.44
SF3A2-204ENST00000589118 UBA5Q9GZZ9 404 aa17.77■□□□□ 0.44
SF3A2-204ENST00000589118 COL20A1Q9P218 1284 aa17.77■□□□□ 0.44
SF3A2-204ENST00000589118 HDAC6Q9UBN7 1215 aa17.77■□□□□ 0.44
SF3A2-204ENST00000589118 RAD50Q92878 1312 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 GJB5O95377 273 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 PDHBP11177 359 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 CKBP12277 381 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 ERVK-21P61565 698 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 ARHGAP1Q07960 439 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 MBTPS1Q14703 1052 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 CNKSR3Q6P9H4 555 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 FAM178BQ8IXR5 827 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 GJD3Q8N144 294 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 AFAP1L1Q8TED9 768 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 ANKS1AQ92625 1134 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 CHMP4BQ9H444 224 aaKnown RBP17.76■□□□□ 0.43
SF3A2-204ENST00000589118 ANAPC4Q9UJX5 808 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 RCAN3Q9UKA8 241 aa17.76■□□□□ 0.43
SF3A2-204ENST00000589118 ARIH1Q9Y4X5 557 aaPredicted RBP17.76■□□□□ 0.43
SF3A2-204ENST00000589118 ORC4O43929 436 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms