RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 RASGRP4Q8TDF6 673 aa17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 NSUN6Q8TEA1 469 aaKnown RBP17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 RMDN3Q96TC7 470 aa17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 BRMS1Q9HCU9 246 aa17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 PTCH2Q9Y6C5 1203 aa17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 ASTN1O14525 1302 aa17.72■□□□□ 0.43
RPRD1A-208ENST00000589050 SMCHD1A6NHR9 2005 aa17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 ADCY3O60266 1144 aa17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 FOSP01100 380 aaPredicted RBP17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 EIF2AK2P19525 551 aaKnown RBP17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 KRT2P35908 639 aa17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 AP3B2Q13367 1082 aa17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 SAFBQ15424 915 aaKnown RBP eCLIP17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 OLFML2BQ68BL8 750 aa17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 MCTP2Q6DN12 878 aa17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 ZNF467Q7Z7K2 595 aaPredicted RBP17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 TRMT44Q8IYL2 757 aaKnown RBP17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 OXER1Q8TDS5 423 aa17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 PGBD1Q96JS3 809 aa17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 EHMT1Q9H9B1 1298 aa17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 PXMP2Q9NR77 195 aa17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 FLRT1Q9NZU1 646 aa17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 PCDHA6Q9UN73 950 aa17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 PCDHA8Q9Y5H6 950 aa17.71■□□□□ 0.43
RPRD1A-208ENST00000589050 ASB14A6NK59 587 aa17.7■□□□□ 0.42
RPRD1A-208ENST00000589050 H3BQV1 296 aa17.7■□□□□ 0.42
RPRD1A-208ENST00000589050 ELNP15502 786 aa17.7■□□□□ 0.42
RPRD1A-208ENST00000589050 PDCP20941 246 aa17.7■□□□□ 0.42
RPRD1A-208ENST00000589050 UBXN2AP68543 259 aa17.7■□□□□ 0.42
RPRD1A-208ENST00000589050 IFFO2Q5TF58 517 aa17.7■□□□□ 0.42
RPRD1A-208ENST00000589050 DIS3L2Q8IYB7 885 aaKnown RBP17.7■□□□□ 0.42
RPRD1A-208ENST00000589050 TRIB2Q92519 343 aa17.7■□□□□ 0.42
RPRD1A-208ENST00000589050 MPHOSPH6Q99547 160 aaKnown RBP17.7■□□□□ 0.42
RPRD1A-208ENST00000589050 ANO3Q9BYT9 981 aa17.7■□□□□ 0.42
RPRD1A-208ENST00000589050 DDX49Q9Y6V7 483 aaKnown RBP17.7■□□□□ 0.42
RPRD1A-208ENST00000589050 B4DLN1 442 aa17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 M0R2N6 131 aa17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 PKN2Q16513 984 aaKnown RBP17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 MAMDC4Q6UXC1 1216 aa17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 ARMCX2Q7L311 632 aa17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 MSL3Q8N5Y2 521 aaKnown RBP17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 SLAIN1Q8ND83 568 aa17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 PXYLP1Q8TE99 480 aa17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 IWS1Q96ST2 819 aa17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 PDCD2LQ9BRP1 358 aa17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 TINF2Q9BSI4 451 aa17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 DAXXQ9UER7 740 aaPredicted RBP17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 FRMPD4Q14CM0 1322 aa17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 RPTORQ8N122 1335 aa17.69■□□□□ 0.42
RPRD1A-208ENST00000589050 LOC102724159A0A0B4J2E5 919 aa17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 CCDC194A0A1B0GVG4 234 aa17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 VPS37CA5D8V6 355 aaPredicted RBP17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 BTBD18B2RXH4 712 aa17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 GRK4P32298 578 aa17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 CYP2C19P33261 490 aa17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 PDE4DQ08499 809 aa17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 NR5A1Q13285 461 aa17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 GNL2Q13823 731 aaKnown RBP17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 PGM5Q15124 567 aa17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 PWP2Q15269 919 aaKnown RBP17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 MFSD14CQ5VZR4 134 aa17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 FBXO46Q6PJ61 603 aaPredicted RBP17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 KRT25Q7Z3Z0 450 aa17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 SYNGAP1Q96PV0 1343 aa17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 CASP8AP2Q9UKL3 1982 aa17.68■□□□□ 0.42
RPRD1A-208ENST00000589050 HMGCRP04035 888 aa17.67■□□□□ 0.42
RPRD1A-208ENST00000589050 NR3C2P08235 984 aa17.67■□□□□ 0.42
RPRD1A-208ENST00000589050 MYCLP12524 364 aaPredicted RBP17.67■□□□□ 0.42
RPRD1A-208ENST00000589050 SYT1P21579 422 aa17.67■□□□□ 0.42
RPRD1A-208ENST00000589050 EDNRBP24530 442 aa17.67■□□□□ 0.42
RPRD1A-208ENST00000589050 CCND2P30279 289 aa17.67■□□□□ 0.42
RPRD1A-208ENST00000589050 MCTP1Q6DN14 999 aa17.67■□□□□ 0.42
RPRD1A-208ENST00000589050 IL31RAQ8NI17 732 aa17.67■□□□□ 0.42
RPRD1A-208ENST00000589050 MORC4Q8TE76 937 aa17.67■□□□□ 0.42
RPRD1A-208ENST00000589050 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.67■□□□□ 0.42
RPRD1A-208ENST00000589050 SNAI1O95863 264 aaPredicted RBP17.66■□□□□ 0.42
RPRD1A-208ENST00000589050 IGHA2P01877 340 aa17.66■□□□□ 0.42
RPRD1A-208ENST00000589050 SREBF1P36956 1147 aa17.66■□□□□ 0.42
RPRD1A-208ENST00000589050 TRIM32Q13049 653 aa17.66■□□□□ 0.42
RPRD1A-208ENST00000589050 NONOQ15233 471 aaKnown RBP eCLIP17.66■□□□□ 0.42
RPRD1A-208ENST00000589050 STXBP2Q15833 593 aa17.66■□□□□ 0.42
RPRD1A-208ENST00000589050 SLC9C1Q4G0N8 1177 aa17.66■□□□□ 0.42
RPRD1A-208ENST00000589050 PIK3AP1Q6ZUJ8 805 aa17.66■□□□□ 0.42
RPRD1A-208ENST00000589050 SH3TC2Q8TF17 1288 aa17.66■□□□□ 0.42
RPRD1A-208ENST00000589050 TNFRSF25Q93038 417 aa17.66■□□□□ 0.42
RPRD1A-208ENST00000589050 FOXP1Q9H334 677 aaPredicted RBP17.66■□□□□ 0.42
RPRD1A-208ENST00000589050 CNPY2Q9Y2B0 182 aa17.66■□□□□ 0.42
RPRD1A-208ENST00000589050 LCTP09848 1927 aa17.66■□□□□ 0.42
RPRD1A-208ENST00000589050 INHAP05111 366 aa17.65■□□□□ 0.42
RPRD1A-208ENST00000589050 ARHGAP4P98171 946 aa17.65■□□□□ 0.42
RPRD1A-208ENST00000589050 PCNX4Q63HM2 1172 aa17.65■□□□□ 0.42
RPRD1A-208ENST00000589050 XRRA1Q6P2D8 792 aa17.65■□□□□ 0.42
RPRD1A-208ENST00000589050 EEPD1Q7L9B9 569 aa17.65■□□□□ 0.42
RPRD1A-208ENST00000589050 VSIG10LQ86VR7 867 aa17.65■□□□□ 0.42
RPRD1A-208ENST00000589050 TBCKQ8TEA7 893 aa17.65■□□□□ 0.42
RPRD1A-208ENST00000589050 FAM205CA6NFA0 338 aa17.64■□□□□ 0.41
RPRD1A-208ENST00000589050 KIF28PB7ZC32 967 aa17.64■□□□□ 0.41
RPRD1A-208ENST00000589050 STX6O43752 255 aa17.64■□□□□ 0.41
RPRD1A-208ENST00000589050 EIF3JO75822 258 aaKnown RBP17.64■□□□□ 0.41
RPRD1A-208ENST00000589050 PRKAR2AP13861 404 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms