RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 NPY5RQ15761 445 aa21.76■■□□□ 1.07
CLPTM1-209ENST00000588855 MSL3Q8N5Y2 521 aaKnown RBP21.76■■□□□ 1.07
CLPTM1-209ENST00000588855 FAM184AQ8NB25 1140 aa21.76■■□□□ 1.07
CLPTM1-209ENST00000588855 PHF20Q9BVI0 1012 aa21.76■■□□□ 1.07
CLPTM1-209ENST00000588855 TMEM260Q9NX78 707 aa21.76■■□□□ 1.07
CLPTM1-209ENST00000588855 BIN2Q9UBW5 565 aaPredicted RBP21.76■■□□□ 1.07
CLPTM1-209ENST00000588855 SYNGAP1Q96PV0 1343 aa21.76■■□□□ 1.07
CLPTM1-209ENST00000588855 BRCA2P51587 3418 aa21.76■■□□□ 1.07
CLPTM1-209ENST00000588855 ASB14A6NK59 587 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 GJB2P29033 226 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 ARHGEF16Q5VV41 709 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 MFSD14CQ5VZR4 134 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 FAM177A1Q8N128 213 aaPredicted RBP21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 RASGRP4Q8TDF6 673 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 NSUN6Q8TEA1 469 aaKnown RBP21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 PGBD1Q96JS3 809 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 PCDHA4Q9UN74 947 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 SMC3Q9UQE7 1217 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 FRMPD4Q14CM0 1322 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 SNAI1O95863 264 aaPredicted RBP21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 PRKAR2AP13861 404 aaKnown RBP21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 EDNRBP24530 442 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 UBXN2AP68543 259 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 CACNB2Q08289 660 aaPredicted RBP21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 JAKMIP3Q5VZ66 844 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 TEX2Q8IWB9 1127 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 REXO1Q8N1G1 1221 aaKnown RBP21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 IL31RAQ8NI17 732 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 MORC4Q8TE76 937 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 PDCD2LQ9BRP1 358 aa21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.75■■□□□ 1.07
CLPTM1-209ENST00000588855 MYH7BA7E2Y1 1941 aa21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 RPTORQ8N122 1335 aa21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 LOC102724159A0A0B4J2E5 919 aa21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 SPDYE3A6NKU9 549 aa21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 PWP2Q15269 919 aaKnown RBP21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 PRAMEF19Q5SWL8 479 aa21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 MAP3K21Q5TCX8 1036 aa21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 DAGLBQ8NCG7 672 aa21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 BICD2Q8TD16 824 aa21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 ARMC5Q96C12 935 aa21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 FOXD4L1Q9NU39 408 aa21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 PCDHA6Q9UN73 950 aa21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 PCDHA8Q9Y5H6 950 aa21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 KIAA1217Q5T5P2 1943 aa21.74■■□□□ 1.07
CLPTM1-209ENST00000588855 GUCY1B3Q02153 619 aa21.73■■□□□ 1.07
CLPTM1-209ENST00000588855 AP3B2Q13367 1082 aa21.73■■□□□ 1.07
CLPTM1-209ENST00000588855 TRIM29Q14134 588 aa21.73■■□□□ 1.07
CLPTM1-209ENST00000588855 PGM5Q15124 567 aa21.73■■□□□ 1.07
CLPTM1-209ENST00000588855 KRT40Q6A162 431 aa21.73■■□□□ 1.07
CLPTM1-209ENST00000588855 BLIDQ8IZY5 108 aa21.73■■□□□ 1.07
CLPTM1-209ENST00000588855 TRPV1Q8NER1 839 aa21.73■■□□□ 1.07
CLPTM1-209ENST00000588855 ZNF333Q96JL9 665 aa21.73■■□□□ 1.07
CLPTM1-209ENST00000588855 C8orf76Q96K31 380 aa21.73■■□□□ 1.07
CLPTM1-209ENST00000588855 ANO3Q9BYT9 981 aa21.73■■□□□ 1.07
CLPTM1-209ENST00000588855 MYCP01106 439 aaPredicted RBP21.72■■□□□ 1.07
CLPTM1-209ENST00000588855 CYBAP13498 195 aa21.72■■□□□ 1.07
CLPTM1-209ENST00000588855 PDE4DQ08499 809 aa21.72■■□□□ 1.07
CLPTM1-209ENST00000588855 GALNT17Q6IS24 598 aa21.72■■□□□ 1.07
CLPTM1-209ENST00000588855 EEPD1Q7L9B9 569 aa21.72■■□□□ 1.07
CLPTM1-209ENST00000588855 INTS4Q96HW7 963 aaKnown RBP21.72■■□□□ 1.07
CLPTM1-209ENST00000588855 IWS1Q96ST2 819 aa21.72■■□□□ 1.07
CLPTM1-209ENST00000588855 MPHOSPH6Q99547 160 aaKnown RBP21.72■■□□□ 1.07
CLPTM1-209ENST00000588855 KATNBL1Q9H079 304 aa21.72■■□□□ 1.07
CLPTM1-209ENST00000588855 CNPY2Q9Y2B0 182 aa21.72■■□□□ 1.07
CLPTM1-209ENST00000588855 M0R2N6 131 aa21.71■■□□□ 1.07
CLPTM1-209ENST00000588855 FOSP01100 380 aaPredicted RBP21.71■■□□□ 1.07
CLPTM1-209ENST00000588855 MMP1P03956 469 aa21.71■■□□□ 1.07
CLPTM1-209ENST00000588855 NR3C2P08235 984 aa21.71■■□□□ 1.07
CLPTM1-209ENST00000588855 MTFR1Q15390 333 aa21.71■■□□□ 1.07
CLPTM1-209ENST00000588855 FBXO16Q8IX29 292 aaPredicted RBP21.71■■□□□ 1.07
CLPTM1-209ENST00000588855 OXER1Q8TDS5 423 aa21.71■■□□□ 1.07
CLPTM1-209ENST00000588855 ZHX1Q9UKY1 873 aaPredicted RBP21.71■■□□□ 1.07
CLPTM1-209ENST00000588855 KIF3AQ9Y496 699 aa21.71■■□□□ 1.07
CLPTM1-209ENST00000588855 FRMPD3Q5JV73 1810 aa21.71■■□□□ 1.07
CLPTM1-209ENST00000588855 B4DLN1 442 aa21.7■■□□□ 1.07
CLPTM1-209ENST00000588855 ZNF865P0CJ78 1059 aaPredicted RBP21.7■■□□□ 1.07
CLPTM1-209ENST00000588855 MYCLP12524 364 aaPredicted RBP21.7■■□□□ 1.07
CLPTM1-209ENST00000588855 CCND3P30281 292 aaPredicted RBP21.7■■□□□ 1.07
CLPTM1-209ENST00000588855 UNC93B1Q9H1C4 597 aa21.7■■□□□ 1.07
CLPTM1-209ENST00000588855 ABHD16BQ9H3Z7 469 aa21.7■■□□□ 1.07
CLPTM1-209ENST00000588855 CCND2P30279 289 aa21.7■■□□□ 1.06
CLPTM1-209ENST00000588855 ACVR2BQ13705 512 aa21.7■■□□□ 1.06
CLPTM1-209ENST00000588855 FBXO18Q8NFZ0 1043 aa21.7■■□□□ 1.06
CLPTM1-209ENST00000588855 ZFP91Q96JP5 570 aaPredicted RBP21.7■■□□□ 1.06
CLPTM1-209ENST00000588855 EHMT1Q9H9B1 1298 aa21.7■■□□□ 1.06
CLPTM1-209ENST00000588855 KRT2P35908 639 aa21.69■■□□□ 1.06
CLPTM1-209ENST00000588855 MRPS9P82933 396 aaKnown RBP21.69■■□□□ 1.06
CLPTM1-209ENST00000588855 STXBP2Q15833 593 aa21.69■■□□□ 1.06
CLPTM1-209ENST00000588855 MCTP2Q6DN12 878 aa21.69■■□□□ 1.06
CLPTM1-209ENST00000588855 VSIG10LQ86VR7 867 aa21.69■■□□□ 1.06
CLPTM1-209ENST00000588855 DIS3L2Q8IYB7 885 aaKnown RBP21.69■■□□□ 1.06
CLPTM1-209ENST00000588855 VTA1Q9NP79 307 aa21.69■■□□□ 1.06
CLPTM1-209ENST00000588855 NRBP1Q9UHY1 535 aa21.69■■□□□ 1.06
CLPTM1-209ENST00000588855 CCL5P13501 91 aa21.68■■□□□ 1.06
CLPTM1-209ENST00000588855 CNGA1P29973 690 aa21.68■■□□□ 1.06
CLPTM1-209ENST00000588855 SREBF1P36956 1147 aa21.68■■□□□ 1.06
CLPTM1-209ENST00000588855 NR5A1Q13285 461 aa21.68■■□□□ 1.06
CLPTM1-209ENST00000588855 PCNX4Q63HM2 1172 aa21.68■■□□□ 1.06
CLPTM1-209ENST00000588855 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms