RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 ABHD16BQ9H3Z7 469 aa23.15■■□□□ 1.3
ATG4D-208ENST00000588667 B4DLN1 442 aa23.14■■□□□ 1.29
ATG4D-208ENST00000588667 STXBP3O00186 592 aa23.14■■□□□ 1.29
ATG4D-208ENST00000588667 PIK3CDO00329 1044 aa23.14■■□□□ 1.29
ATG4D-208ENST00000588667 MRPL12P52815 198 aaKnown RBP23.14■■□□□ 1.29
ATG4D-208ENST00000588667 SOX10P56693 466 aa23.14■■□□□ 1.29
ATG4D-208ENST00000588667 SSRP1Q08945 709 aaKnown RBP23.14■■□□□ 1.29
ATG4D-208ENST00000588667 TYW1BQ6NUM6 668 aa23.14■■□□□ 1.29
ATG4D-208ENST00000588667 NSUN6Q8TEA1 469 aaKnown RBP23.14■■□□□ 1.29
ATG4D-208ENST00000588667 CUL5Q93034 780 aa23.14■■□□□ 1.29
ATG4D-208ENST00000588667 DEFB118Q96PH6 123 aa23.14■■□□□ 1.29
ATG4D-208ENST00000588667 TAAR1Q96RJ0 339 aa23.14■■□□□ 1.29
ATG4D-208ENST00000588667 RMDN3Q96TC7 470 aa23.14■■□□□ 1.29
ATG4D-208ENST00000588667 PSTPIP2Q9H939 334 aa23.14■■□□□ 1.29
ATG4D-208ENST00000588667 POTEFA5A3E0 1075 aa23.13■■□□□ 1.29
ATG4D-208ENST00000588667 SEPT4O43236 478 aa23.13■■□□□ 1.29
ATG4D-208ENST00000588667 MSCO60682 206 aa23.13■■□□□ 1.29
ATG4D-208ENST00000588667 PPFIA3O75145 1194 aa23.13■■□□□ 1.29
ATG4D-208ENST00000588667 ZNF865P0CJ78 1059 aaPredicted RBP23.13■■□□□ 1.29
ATG4D-208ENST00000588667 EDNRBP24530 442 aa23.13■■□□□ 1.29
ATG4D-208ENST00000588667 CNGA1P29973 690 aa23.13■■□□□ 1.29
ATG4D-208ENST00000588667 GJA8P48165 433 aa23.13■■□□□ 1.29
ATG4D-208ENST00000588667 NUCB2P80303 420 aa23.13■■□□□ 1.29
ATG4D-208ENST00000588667 TEX2Q8IWB9 1127 aa23.13■■□□□ 1.29
ATG4D-208ENST00000588667 NECAB1Q8N987 351 aa23.13■■□□□ 1.29
ATG4D-208ENST00000588667 U2AF1L4Q8WU68 220 aaKnown RBP23.13■■□□□ 1.29
ATG4D-208ENST00000588667 SMC3Q9UQE7 1217 aa23.13■■□□□ 1.29
ATG4D-208ENST00000588667 ACVR2BQ13705 512 aa23.12■■□□□ 1.29
ATG4D-208ENST00000588667 KATNBL1Q9H079 304 aa23.12■■□□□ 1.29
ATG4D-208ENST00000588667 PXMP2Q9NR77 195 aa23.12■■□□□ 1.29
ATG4D-208ENST00000588667 DDX20Q9UHI6 824 aaKnown RBP23.12■■□□□ 1.29
ATG4D-208ENST00000588667 ZHX1Q9UKY1 873 aaPredicted RBP23.12■■□□□ 1.29
ATG4D-208ENST00000588667 STK36Q9NRP7 1315 aa23.12■■□□□ 1.29
ATG4D-208ENST00000588667 MEIS2O14770 477 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 DEXIO95424 95 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 SGPL1O95470 568 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 ARHGEF16Q5VV41 709 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 SMARCC2Q8TAQ2 1214 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 CCDC12Q8WUD4 166 aaPredicted RBP23.11■■□□□ 1.29
ATG4D-208ENST00000588667 IWS1Q96ST2 819 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 DDX49Q9Y6V7 483 aaKnown RBP23.11■■□□□ 1.29
ATG4D-208ENST00000588667 CAPN2P17655 700 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 PDE4DQ08499 809 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 USP17L6PQ6QN14 398 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 FCHSD1Q86WN1 690 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 GLT8D2Q9H1C3 349 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 VTA1Q9NP79 307 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 RIC8AQ9NPQ8 531 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 KIAA1217Q5T5P2 1943 aa23.11■■□□□ 1.29
ATG4D-208ENST00000588667 ESYT2A0FGR8 921 aa23.1■■□□□ 1.29
ATG4D-208ENST00000588667 CAPN15O75808 1086 aa23.1■■□□□ 1.29
ATG4D-208ENST00000588667 CTDNEP1O95476 244 aa23.1■■□□□ 1.29
ATG4D-208ENST00000588667 AKR1A1P14550 325 aa23.1■■□□□ 1.29
ATG4D-208ENST00000588667 EIF2AK2P19525 551 aaKnown RBP23.1■■□□□ 1.29
ATG4D-208ENST00000588667 ADCY7P51828 1080 aa23.1■■□□□ 1.29
ATG4D-208ENST00000588667 ST3GAL1Q11201 340 aa23.1■■□□□ 1.29
ATG4D-208ENST00000588667 LHX8Q68G74 356 aa23.1■■□□□ 1.29
ATG4D-208ENST00000588667 CRISPLD2Q9H0B8 497 aa23.1■■□□□ 1.29
ATG4D-208ENST00000588667 FBXO16Q8IX29 292 aaPredicted RBP23.09■■□□□ 1.29
ATG4D-208ENST00000588667 CCDC148Q8NFR7 591 aa23.09■■□□□ 1.29
ATG4D-208ENST00000588667 SHISA4Q96DD7 197 aa23.09■■□□□ 1.29
ATG4D-208ENST00000588667 FAM184BQ9ULE4 1060 aa23.09■■□□□ 1.29
ATG4D-208ENST00000588667 FRMPD4Q14CM0 1322 aa23.09■■□□□ 1.29
ATG4D-208ENST00000588667 SMCO2A6NFE2 343 aa23.08■■□□□ 1.29
ATG4D-208ENST00000588667 EEPD1Q7L9B9 569 aa23.08■■□□□ 1.29
ATG4D-208ENST00000588667 PDCD2LQ9BRP1 358 aa23.08■■□□□ 1.29
ATG4D-208ENST00000588667 LLPHQ9BRT6 129 aaKnown RBP23.08■■□□□ 1.29
ATG4D-208ENST00000588667 ZMYND12Q9H0C1 365 aa23.08■■□□□ 1.29
ATG4D-208ENST00000588667 SH3GLB2Q9NR46 395 aa23.08■■□□□ 1.29
ATG4D-208ENST00000588667 EN2P19622 333 aaPredicted RBP23.08■■□□□ 1.28
ATG4D-208ENST00000588667 UBE2SQ16763 222 aa23.08■■□□□ 1.28
ATG4D-208ENST00000588667 CCDC144BQ3MJ40 725 aa23.08■■□□□ 1.28
ATG4D-208ENST00000588667 NSUN7Q8NE18 718 aaKnown RBP23.08■■□□□ 1.28
ATG4D-208ENST00000588667 VPS54Q9P1Q0 977 aa23.08■■□□□ 1.28
ATG4D-208ENST00000588667 OGDHLQ9ULD0 1010 aa23.08■■□□□ 1.28
ATG4D-208ENST00000588667 MKI67P46013 3256 aaKnown RBP23.07■■□□□ 1.28
ATG4D-208ENST00000588667 TFRCP02786 760 aaKnown RBP23.07■■□□□ 1.28
ATG4D-208ENST00000588667 NR3C2P08235 984 aa23.07■■□□□ 1.28
ATG4D-208ENST00000588667 PGM5Q15124 567 aa23.07■■□□□ 1.28
ATG4D-208ENST00000588667 STXBP2Q15833 593 aa23.07■■□□□ 1.28
ATG4D-208ENST00000588667 FAM177A1Q8N128 213 aaPredicted RBP23.07■■□□□ 1.28
ATG4D-208ENST00000588667 SPDYE3A6NKU9 549 aa23.06■■□□□ 1.28
ATG4D-208ENST00000588667 RARBP10826 455 aa23.06■■□□□ 1.28
ATG4D-208ENST00000588667 TAPT1Q6NXT6 567 aa23.06■■□□□ 1.28
ATG4D-208ENST00000588667 C6orf50Q9HD87 102 aa23.06■■□□□ 1.28
ATG4D-208ENST00000588667 ORC3Q9UBD5 711 aaPredicted RBP23.06■■□□□ 1.28
ATG4D-208ENST00000588667 GJB2P29033 226 aa23.05■■□□□ 1.28
ATG4D-208ENST00000588667 GNA11P29992 359 aa23.05■■□□□ 1.28
ATG4D-208ENST00000588667 ANO1Q5XXA6 986 aa23.05■■□□□ 1.28
ATG4D-208ENST00000588667 PDIA4P13667 645 aaKnown RBP23.04■■□□□ 1.28
ATG4D-208ENST00000588667 CCND2P30279 289 aa23.04■■□□□ 1.28
ATG4D-208ENST00000588667 ADCYAP1R1P41586 468 aa23.04■■□□□ 1.28
ATG4D-208ENST00000588667 CLK2P49760 499 aaKnown RBP23.04■■□□□ 1.28
ATG4D-208ENST00000588667 VSIG10LQ86VR7 867 aa23.04■■□□□ 1.28
ATG4D-208ENST00000588667 ANKLE1Q8NAG6 615 aa23.04■■□□□ 1.28
ATG4D-208ENST00000588667 IL31RAQ8NI17 732 aa23.04■■□□□ 1.28
ATG4D-208ENST00000588667 WASF1Q92558 559 aa23.04■■□□□ 1.28
ATG4D-208ENST00000588667 AIFM3Q96NN9 605 aa23.04■■□□□ 1.28
ATG4D-208ENST00000588667 PDGFCQ9NRA1 345 aa23.04■■□□□ 1.28
ATG4D-208ENST00000588667 RBM47A0AV96 593 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms