RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 TRPA1O75762 1119 aa25.77■■□□□ 1.72
ACTN4-210ENST00000588618 FIBPO43427 364 aa25.76■■□□□ 1.71
ACTN4-210ENST00000588618 STRNO43815 780 aa25.76■■□□□ 1.71
ACTN4-210ENST00000588618 LETM2Q2VYF4 491 aa25.76■■□□□ 1.71
ACTN4-210ENST00000588618 DOCK3Q8IZD9 2030 aa25.76■■□□□ 1.71
ACTN4-210ENST00000588618 RMDN3Q96TC7 470 aa25.76■■□□□ 1.71
ACTN4-210ENST00000588618 POTEB2H3BUK9 544 aa25.75■■□□□ 1.71
ACTN4-210ENST00000588618 TTC38Q5R3I4 469 aa25.75■■□□□ 1.71
ACTN4-210ENST00000588618 ARHGEF16Q5VV41 709 aa25.75■■□□□ 1.71
ACTN4-210ENST00000588618 ANO1Q5XXA6 986 aa25.75■■□□□ 1.71
ACTN4-210ENST00000588618 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.75■■□□□ 1.718e-8■□□□□ 11.2
ACTN4-210ENST00000588618 POLR3EQ9NVU0 708 aa25.75■■□□□ 1.71
ACTN4-210ENST00000588618 RNF186Q9NXI6 227 aa25.75■■□□□ 1.71
ACTN4-210ENST00000588618 TBC1D8O95759 1140 aa25.74■■□□□ 1.71
ACTN4-210ENST00000588618 SREBF1P36956 1147 aa25.74■■□□□ 1.71
ACTN4-210ENST00000588618 NASPP49321 788 aaPredicted RBP25.74■■□□□ 1.71
ACTN4-210ENST00000588618 ARHGAP4P98171 946 aa25.74■■□□□ 1.71
ACTN4-210ENST00000588618 SF3A1Q15459 793 aaKnown RBP25.74■■□□□ 1.71
ACTN4-210ENST00000588618 GPR142Q7Z601 462 aa25.74■■□□□ 1.71
ACTN4-210ENST00000588618 NAP1L4Q99733 375 aaKnown RBP25.74■■□□□ 1.71
ACTN4-210ENST00000588618 BEGAINQ9BUH8 593 aa25.74■■□□□ 1.71
ACTN4-210ENST00000588618 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.74■■□□□ 1.71
ACTN4-210ENST00000588618 RTEL1Q9NZ71 1219 aa25.74■■□□□ 1.71
ACTN4-210ENST00000588618 CEP131Q9UPN4 1083 aa25.74■■□□□ 1.71
ACTN4-210ENST00000588618 CCNT1O60563 726 aaKnown RBP25.74■■□□□ 1.71
ACTN4-210ENST00000588618 PTPAQ15257 358 aa25.74■■□□□ 1.71
ACTN4-210ENST00000588618 PLEKHH3Q7Z736 793 aa25.74■■□□□ 1.71
ACTN4-210ENST00000588618 NSUN6Q8TEA1 469 aaKnown RBP25.74■■□□□ 1.71
ACTN4-210ENST00000588618 TAAR1Q96RJ0 339 aa25.74■■□□□ 1.71
ACTN4-210ENST00000588618 ADD3Q9UEY8 706 aaKnown RBP25.74■■□□□ 1.71
ACTN4-210ENST00000588618 ZNF76P36508 570 aa25.73■■□□□ 1.71
ACTN4-210ENST00000588618 USP11P51784 963 aa25.73■■□□□ 1.71
ACTN4-210ENST00000588618 UBXN2AP68543 259 aa25.73■■□□□ 1.71
ACTN4-210ENST00000588618 ABRAQ8N0Z2 381 aa25.73■■□□□ 1.71
ACTN4-210ENST00000588618 LEO1Q8WVC0 666 aaPredicted RBP25.73■■□□□ 1.71
ACTN4-210ENST00000588618 MPHOSPH6Q99547 160 aaKnown RBP25.73■■□□□ 1.71
ACTN4-210ENST00000588618 SCAND2PQ9GZW5 306 aaPredicted RBP25.73■■□□□ 1.71
ACTN4-210ENST00000588618 MRVI1Q9Y6F6 885 aa25.73■■□□□ 1.71
ACTN4-210ENST00000588618 ECM2O94769 699 aaPredicted RBP25.72■■□□□ 1.71
ACTN4-210ENST00000588618 EIF2AK2P19525 551 aaKnown RBP25.72■■□□□ 1.71
ACTN4-210ENST00000588618 MAP2K1Q02750 393 aaPredicted RBP25.72■■□□□ 1.71
ACTN4-210ENST00000588618 ZNF174Q15697 407 aa25.72■■□□□ 1.71
ACTN4-210ENST00000588618 CSPP1Q1MSJ5 1256 aa25.72■■□□□ 1.71
ACTN4-210ENST00000588618 LINC00301Q8NCQ3 95 aa25.72■■□□□ 1.71
ACTN4-210ENST00000588618 DNERQ8NFT8 737 aa25.72■■□□□ 1.71
ACTN4-210ENST00000588618 CFHR5Q9BXR6 569 aa25.72■■□□□ 1.71
ACTN4-210ENST00000588618 PXMP2Q9NR77 195 aa25.72■■□□□ 1.71
ACTN4-210ENST00000588618 ASTN1O14525 1302 aa25.72■■□□□ 1.71
ACTN4-210ENST00000588618 RPTORQ8N122 1335 aa25.72■■□□□ 1.71
ACTN4-210ENST00000588618 MCM7P33993 719 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 STK38Q15208 465 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 IL31RAQ8NI17 732 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 RCOR1Q9UKL0 485 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 FRMPD4Q14CM0 1322 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 ZSWIM8A7E2V4 1837 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 PLXNA1Q9UIW2 1896 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 B4DLN1 442 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 GOLGA6L22H0YM25 854 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 TDP2O95551 362 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 BMP15O95972 392 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 PGK2P07205 417 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 GCFC2P16383 781 aaKnown RBP25.71■■□□□ 1.71
ACTN4-210ENST00000588618 PTPREP23469 700 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 ADORA2AP29274 412 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 MCM4P33991 863 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 KIF22Q14807 665 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 SPATA32Q96LK8 384 aa25.71■■□□□ 1.71
ACTN4-210ENST00000588618 TNPO2O14787 897 aaKnown RBP25.7■■□□□ 1.7
ACTN4-210ENST00000588618 CNTN2Q02246 1040 aa25.7■■□□□ 1.7
ACTN4-210ENST00000588618 DPP9Q86TI2 863 aa25.7■■□□□ 1.7
ACTN4-210ENST00000588618 SAGE1Q9NXZ1 904 aa25.7■■□□□ 1.7
ACTN4-210ENST00000588618 SLC5A4Q9NY91 659 aa25.7■■□□□ 1.7
ACTN4-210ENST00000588618 MGAMO43451 1857 aa25.69■■□□□ 1.7
ACTN4-210ENST00000588618 YEATS4O95619 227 aa25.69■■□□□ 1.7
ACTN4-210ENST00000588618 PGM5Q15124 567 aa25.69■■□□□ 1.7
ACTN4-210ENST00000588618 TMEM87AQ8NBN3 555 aa25.69■■□□□ 1.7
ACTN4-210ENST00000588618 PDCD2LQ9BRP1 358 aa25.69■■□□□ 1.7
ACTN4-210ENST00000588618 DDX49Q9Y6V7 483 aaKnown RBP25.69■■□□□ 1.7
ACTN4-210ENST00000588618 SLC15A5A6NIM6 579 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 CYP3A4P08684 503 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 MYCLP12524 364 aaPredicted RBP25.68■■□□□ 1.7
ACTN4-210ENST00000588618 FCGRTP55899 365 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 SP3Q02447 781 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 ORC2Q13416 577 aaPredicted RBP25.68■■□□□ 1.7
ACTN4-210ENST00000588618 GRB14Q14449 540 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 SLC39A14Q15043 492 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 NFKBIBQ15653 356 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 PPP4R3AQ6IN85 833 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 C4orf32Q8N8J7 132 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 FAM133AQ8N9E0 248 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 TMEM60Q9H2L4 133 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 DDX25Q9UHL0 483 aaKnown RBP25.68■■□□□ 1.7
ACTN4-210ENST00000588618 LRRC37A2A6NM11 1700 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 MCM3APO60318 1980 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 SLC37A4O43826 429 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 NEMFO60524 1076 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 CCND2P30279 289 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 PCNX4Q63HM2 1172 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 MOXD1Q6UVY6 613 aa25.68■■□□□ 1.7
ACTN4-210ENST00000588618 ZFP91Q96JP5 570 aaPredicted RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms