RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
ERCC1-205ENST00000587888 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.24
ERCC1-205ENST00000587888 WDR19Q8NEZ3 1342 aa16.58■□□□□ 0.24
ERCC1-205ENST00000587888 RAD50Q92878 1312 aa16.58■□□□□ 0.24
ERCC1-205ENST00000587888 UNC80Q8N2C7 3258 aa16.57■□□□□ 0.24
ERCC1-205ENST00000587888 B4E1Z4 1266 aa16.57■□□□□ 0.24
ERCC1-205ENST00000587888 KPNA6O60684 536 aa16.57■□□□□ 0.24
ERCC1-205ENST00000587888 ATP2A2P16615 1042 aaKnown RBP16.57■□□□□ 0.24
ERCC1-205ENST00000587888 EDNRBP24530 442 aa16.57■□□□□ 0.24
ERCC1-205ENST00000587888 TTLL4Q14679 1199 aa16.57■□□□□ 0.24
ERCC1-205ENST00000587888 CDC37Q16543 378 aaPredicted RBP16.57■□□□□ 0.24
ERCC1-205ENST00000587888 CCDC178Q5BJE1 867 aa16.57■□□□□ 0.24
ERCC1-205ENST00000587888 TJAP1Q5JTD0 557 aa16.57■□□□□ 0.24
ERCC1-205ENST00000587888 SEPT14Q6ZU15 432 aa16.57■□□□□ 0.24
ERCC1-205ENST00000587888 ADGRF4Q8IZF3 695 aa16.57■□□□□ 0.24
ERCC1-205ENST00000587888 RETREG2Q8NC44 543 aa16.57■□□□□ 0.24
ERCC1-205ENST00000587888 RGS22Q8NE09 1264 aa16.57■□□□□ 0.24
ERCC1-205ENST00000587888 YTHDC1Q96MU7 727 aaKnown RBP16.57■□□□□ 0.24
ERCC1-205ENST00000587888 TAAR1Q96RJ0 339 aa16.57■□□□□ 0.24
ERCC1-205ENST00000587888 ZSCAN10Q96SZ4 725 aaPredicted RBP16.57■□□□□ 0.24
ERCC1-205ENST00000587888 ZSWIM5Q9P217 1185 aa16.57■□□□□ 0.24
ERCC1-205ENST00000587888 A6NJR5 290 aa16.56■□□□□ 0.24
ERCC1-205ENST00000587888 DHX16O60231 1041 aaKnown RBP16.56■□□□□ 0.24
ERCC1-205ENST00000587888 ARIH2O95376 493 aa16.56■□□□□ 0.24
ERCC1-205ENST00000587888 NUCB1Q02818 461 aa16.56■□□□□ 0.24
ERCC1-205ENST00000587888 LY6KQ17RY6 165 aa16.56■□□□□ 0.24
ERCC1-205ENST00000587888 GBF1Q92538 1859 aa16.56■□□□□ 0.24
ERCC1-205ENST00000587888 ABCB11O95342 1321 aa16.55■□□□□ 0.24
ERCC1-205ENST00000587888 AAMPQ13685 434 aa16.55■□□□□ 0.24
ERCC1-205ENST00000587888 PPP2R2DQ66LE6 453 aa16.55■□□□□ 0.24
ERCC1-205ENST00000587888 NFRKBQ6P4R8 1299 aa16.55■□□□□ 0.24
ERCC1-205ENST00000587888 CHST3Q7LGC8 479 aa16.55■□□□□ 0.24
ERCC1-205ENST00000587888 FTOQ9C0B1 505 aaKnown RBP eCLIP16.55■□□□□ 0.24
ERCC1-205ENST00000587888 OSBPL3Q9H4L5 887 aa16.55■□□□□ 0.24
ERCC1-205ENST00000587888 NOD1Q9Y239 953 aa16.55■□□□□ 0.24
ERCC1-205ENST00000587888 PCDHA11Q9Y5I1 949 aa16.55■□□□□ 0.24
ERCC1-205ENST00000587888 PFKMP08237 780 aa16.54■□□□□ 0.24
ERCC1-205ENST00000587888 IQCF3P0C7M6 154 aa16.54■□□□□ 0.24
ERCC1-205ENST00000587888 ACTN1P12814 892 aa16.54■□□□□ 0.24
ERCC1-205ENST00000587888 IMMTQ16891 758 aaKnown RBP16.54■□□□□ 0.24
ERCC1-205ENST00000587888 QRICH1Q2TAL8 776 aa16.54■□□□□ 0.24
ERCC1-205ENST00000587888 ASPRV1Q53RT3 343 aa16.54■□□□□ 0.24
ERCC1-205ENST00000587888 MICALL1Q8N3F8 863 aa16.54■□□□□ 0.24
ERCC1-205ENST00000587888 ENAHQ8N8S7 591 aaPredicted RBP16.54■□□□□ 0.24
ERCC1-205ENST00000587888 SYTL5Q8TDW5 730 aaPredicted RBP16.54■□□□□ 0.24
ERCC1-205ENST00000587888 NSUN6Q8TEA1 469 aaKnown RBP16.54■□□□□ 0.24
ERCC1-205ENST00000587888 AFG1LQ8WV93 481 aa16.54■□□□□ 0.24
ERCC1-205ENST00000587888 ANKS1AQ92625 1134 aa16.54■□□□□ 0.24
ERCC1-205ENST00000587888 COL20A1Q9P218 1284 aa16.54■□□□□ 0.24
ERCC1-205ENST00000587888 HIP1O00291 1037 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 PARP1P09874 1014 aaKnown RBP16.53■□□□□ 0.24
ERCC1-205ENST00000587888 PTPN11Q06124 597 aaPredicted RBP16.53■□□□□ 0.24
ERCC1-205ENST00000587888 STXBP2Q15833 593 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 PTGISQ16647 500 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 TMEM67Q5HYA8 995 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 ARHGEF16Q5VV41 709 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 CCDC62Q6P9F0 684 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 FBXO11Q86XK2 927 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 MCF2L2Q86YR7 1114 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 EXOC6Q8TAG9 804 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 ATXN2LQ8WWM7 1075 aaKnown RBP16.53■□□□□ 0.24
ERCC1-205ENST00000587888 RMDN3Q96TC7 470 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 DSCC1Q9BVC3 393 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 JMJD4Q9H9V9 463 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 CERS4Q9HA82 394 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 CTNNA3Q9UI47 895 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 MRPL11Q9Y3B7 192 aaKnown RBP16.53■□□□□ 0.24
ERCC1-205ENST00000587888 EYSQ5T1H1 3165 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 SCN5AQ14524 2016 aa16.53■□□□□ 0.24
ERCC1-205ENST00000587888 RFXAPO00287 272 aa16.52■□□□□ 0.24
ERCC1-205ENST00000587888 CFBP00751 764 aa16.52■□□□□ 0.24
ERCC1-205ENST00000587888 GH1P01241 217 aa16.52■□□□□ 0.24
ERCC1-205ENST00000587888 EIF2AK2P19525 551 aaKnown RBP16.52■□□□□ 0.24
ERCC1-205ENST00000587888 RFC2P35250 354 aa16.52■□□□□ 0.24
ERCC1-205ENST00000587888 BFSP2Q13515 415 aa16.52■□□□□ 0.24
ERCC1-205ENST00000587888 ASB2Q96Q27 587 aa16.52■□□□□ 0.24
ERCC1-205ENST00000587888 UBAC1Q9BSL1 405 aa16.52■□□□□ 0.24
ERCC1-205ENST00000587888 KRT23Q9C075 422 aa16.52■□□□□ 0.24
ERCC1-205ENST00000587888 THEGQ9P2T0 379 aa16.52■□□□□ 0.24
ERCC1-205ENST00000587888 TNFRSF10AO00220 468 aa16.51■□□□□ 0.23
ERCC1-205ENST00000587888 PITPNM1O00562 1244 aa16.51■□□□□ 0.23
ERCC1-205ENST00000587888 CA3P07451 260 aa16.51■□□□□ 0.23
ERCC1-205ENST00000587888 MMP3P08254 477 aa16.51■□□□□ 0.23
ERCC1-205ENST00000587888 NT5C2P49902 561 aa16.51■□□□□ 0.23
ERCC1-205ENST00000587888 MRPS5P82675 430 aaKnown RBP16.51■□□□□ 0.23
ERCC1-205ENST00000587888 ARHGAP1Q07960 439 aa16.51■□□□□ 0.23
ERCC1-205ENST00000587888 STAG2Q8N3U4 1231 aa16.51■□□□□ 0.23
ERCC1-205ENST00000587888 IWS1Q96ST2 819 aa16.51■□□□□ 0.23
ERCC1-205ENST00000587888 MAF1Q9H063 256 aa16.51■□□□□ 0.23
ERCC1-205ENST00000587888 CASTP20810 708 aaKnown RBP16.5■□□□□ 0.23
ERCC1-205ENST00000587888 IFIT1BQ5T764 474 aaKnown RBP16.5■□□□□ 0.23
ERCC1-205ENST00000587888 GDF6Q6KF10 455 aaPredicted RBP16.5■□□□□ 0.23
ERCC1-205ENST00000587888 ALG1Q9BT22 464 aa16.5■□□□□ 0.23
ERCC1-205ENST00000587888 AMNQ9BXJ7 453 aa16.5■□□□□ 0.23
ERCC1-205ENST00000587888 CNNM2Q9H8M5 875 aa16.5■□□□□ 0.23
ERCC1-205ENST00000587888 DDX41Q9UJV9 622 aaKnown RBP16.5■□□□□ 0.23
ERCC1-205ENST00000587888 MYO9BQ13459 2157 aa16.5■□□□□ 0.23
ERCC1-205ENST00000587888 SCN10AQ9Y5Y9 1956 aa16.49■□□□□ 0.23
ERCC1-205ENST00000587888 CUL9Q8IWT3 2517 aa16.49■□□□□ 0.23
ERCC1-205ENST00000587888 KIF28PB7ZC32 967 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms