RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 SUGCTQ9HAC7 445 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 ADD3Q9UEY8 706 aaKnown RBP10.14□□□□□ -0.79
SDF2-204ENST00000587338 PRR12Q9ULL5 1215 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 MTMR7Q9Y216 660 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 C5orf42Q9H799 3197 aa10.14□□□□□ -0.79
SDF2-204ENST00000587338 LCTP09848 1927 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.13□□□□□ -0.79
SDF2-204ENST00000587338 PTPDC1A2A3K4 754 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 LINC01553A4QN01 128 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 GPAA1O43292 621 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 DCXO43602 365 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 MS4A1P11836 297 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 ERVK-21P61565 698 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 TFAP4Q01664 338 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 PTPN11Q06124 597 aaPredicted RBP10.13□□□□□ -0.79
SDF2-204ENST00000587338 PTGISQ16647 500 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 LRRFIP1Q32MZ4 808 aaKnown RBP10.13□□□□□ -0.79
SDF2-204ENST00000587338 FAM117BQ6P1L5 589 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 AFAP1L1Q8TED9 768 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 COPS5Q92905 334 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 OSBP2Q969R2 916 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 SNX27Q96L92 541 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 RAD9AQ99638 391 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 STX8Q9UNK0 236 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 PTPRSQ13332 1948 aa10.13□□□□□ -0.79
SDF2-204ENST00000587338 RBM47A0AV96 593 aaKnown RBP10.12□□□□□ -0.79
SDF2-204ENST00000587338 A6NJR5 290 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 H3BQ06 376 aaPredicted RBP10.12□□□□□ -0.79
SDF2-204ENST00000587338 NFIBO00712 420 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 KPNA6O60684 536 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 PLA2G6O60733 806 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 GJB5O95377 273 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 ICAM1P05362 532 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 SELPP16109 830 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 GNAT2P19087 354 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 CALML3P27482 149 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 PDE4BQ07343 736 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 PDE4DQ08499 809 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 CCDC96Q2M329 555 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 RCSD1Q6JBY9 416 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 CNKSR3Q6P9H4 555 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 SLC30A10Q6XR72 485 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 EP400NLQ6ZTU2 488 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 LRRC8DQ7L1W4 858 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 SIRT2Q8IXJ6 389 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 FBXO22Q8NEZ5 403 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 EXOC6Q8TAG9 804 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 CAGE1Q8TC20 777 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 APPBP2Q92624 585 aa10.12□□□□□ -0.79
SDF2-204ENST00000587338 ZNF318Q5VUA4 2279 aa10.11□□□□□ -0.79
SDF2-204ENST00000587338 GRXCR2A6NFK2 248 aa10.11□□□□□ -0.79
SDF2-204ENST00000587338 RBAK-RBAKDNI3L0D1 243 aa10.11□□□□□ -0.79
SDF2-204ENST00000587338 M0R2C6 588 aa10.11□□□□□ -0.79
SDF2-204ENST00000587338 NKRFO15226 690 aaKnown RBP eCLIP10.11□□□□□ -0.79
SDF2-204ENST00000587338 SLC3A2P08195 630 aaKnown RBP10.11□□□□□ -0.79
SDF2-204ENST00000587338 TXNP10599 105 aaKnown RBP10.11□□□□□ -0.79
SDF2-204ENST00000587338 SLC16A2P36021 539 aa10.11□□□□□ -0.79
SDF2-204ENST00000587338 GPNMBQ14956 572 aa10.11□□□□□ -0.79
SDF2-204ENST00000587338 TCTN1Q2MV58 587 aa10.11□□□□□ -0.79
SDF2-204ENST00000587338 GDF6Q6KF10 455 aaPredicted RBP10.11□□□□□ -0.79
SDF2-204ENST00000587338 SCFD2Q8WU76 684 aa10.11□□□□□ -0.79
SDF2-204ENST00000587338 DHX38Q92620 1227 aaKnown RBP10.11□□□□□ -0.79
SDF2-204ENST00000587338 CTAGE1Q96RT6 745 aa10.11□□□□□ -0.79
SDF2-204ENST00000587338 MPHOSPH6Q99547 160 aaKnown RBP10.11□□□□□ -0.79
SDF2-204ENST00000587338 C17orf80Q9BSJ5 609 aa10.11□□□□□ -0.79
SDF2-204ENST00000587338 NACAP1Q9BZK3 213 aa10.11□□□□□ -0.79
SDF2-204ENST00000587338 TRIP12Q14669 1992 aaPredicted RBP10.11□□□□□ -0.79
SDF2-204ENST00000587338 USP34Q70CQ2 3546 aa10.11□□□□□ -0.79
SDF2-204ENST00000587338 ZDBF2Q9HCK1 2354 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 SIP14410 1827 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 LOC102724159A0A0B4J2E5 919 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 ABHD14A-ACY1A0A1B0GW23 586 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 TSPY2A6NKD2 308 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 RNF113AO15541 343 aaKnown RBP10.1□□□□□ -0.79
SDF2-204ENST00000587338 SMARCA5O60264 1052 aaPredicted RBP10.1□□□□□ -0.79
SDF2-204ENST00000587338 NMT2O60551 498 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 NBNO60934 754 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 PWP2Q15269 919 aaKnown RBP10.1□□□□□ -0.79
SDF2-204ENST00000587338 PUS10Q3MIT2 529 aaKnown RBP10.1□□□□□ -0.79
SDF2-204ENST00000587338 PPP4R3BQ5MIZ7 849 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 ERICH6BQ5W0A0 696 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 RNF207Q6ZRF8 634 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 IFNL3Q8IZI9 196 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 KBTBD3Q8NAB2 608 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 ANKS1AQ92625 1134 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 NAPBQ9H115 298 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 KCNH6Q9H252 994 aa10.1□□□□□ -0.79
SDF2-204ENST00000587338 RANBP17Q9H2T7 1088 aaKnown RBP10.1□□□□□ -0.79
SDF2-204ENST00000587338 ZFHX2Q9C0A1 2572 aaPredicted RBP10.1□□□□□ -0.79
SDF2-204ENST00000587338 PATL2C9JE40 543 aaKnown RBP10.09□□□□□ -0.79
SDF2-204ENST00000587338 EFCAB14O75071 495 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 ARIH2O95376 493 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 PARNO95453 639 aaKnown RBP10.09□□□□□ -0.79
SDF2-204ENST00000587338 CXCL10P02778 98 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 ZFYP08048 801 aaPredicted RBP10.09□□□□□ -0.79
SDF2-204ENST00000587338 CKBP12277 381 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 ZP2Q05996 745 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 PPARAQ07869 468 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 IKBKEQ14164 716 aa10.09□□□□□ -0.79
SDF2-204ENST00000587338 PTPROQ16827 1216 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms