RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 MROH7Q68CQ1 1323 aa12.03□□□□□ -0.48
SMARCA4-209ENST00000586122 OPLAHO14841 1288 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 ADCY6O43306 1168 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 EIF3JO75822 258 aaKnown RBP12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 SMPD1P17405 629 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 CPT1AP50416 773 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 ATN1P54259 1190 aaPredicted RBP12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 KCNA10Q16322 511 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 FSCN1Q16658 493 aaKnown RBP12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 RTN1Q16799 776 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 KCNV1Q6PIU1 500 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 CUL5Q93034 780 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 FERMT2Q96AC1 680 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 TOX2Q96NM4 488 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 TAAR1Q96RJ0 339 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 LRRC2Q9BYS8 371 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 WDR11Q9BZH6 1224 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 PXMP2Q9NR77 195 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 PDGFCQ9NRA1 345 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 COL20A1Q9P218 1284 aa12.02□□□□□ -0.49
SMARCA4-209ENST00000586122 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 hCG_1984214I3L0E3 225 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 PIK3CDO00329 1044 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 CTAGE5O15320 804 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 DYNC1LI2O43237 492 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 KPNA6O60684 536 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 STAM2O75886 525 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 PLEKHA8P1O95397 391 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 ASGR1P07306 291 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 NR3C2P08235 984 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 RPS6KB1P23443 525 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 BMP8BP34820 402 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 CHRDL2Q6WN34 429 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 SRBD1Q8N5C6 995 aaKnown RBP12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 ZNF713Q8N859 430 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 TBC1D5Q92609 795 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 USP26Q9BXU7 913 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 AGXT2Q9BYV1 514 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 TM6SF1Q9BZW5 370 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 PRO3102Q9H379 93 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 POLR3EQ9NVU0 708 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 RBM27Q9P2N5 1060 aaKnown RBP12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 ATP11BQ9Y2G3 1177 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 NID2Q14112 1375 aa12.01□□□□□ -0.49
SMARCA4-209ENST00000586122 A0A0U1RQG5 324 aaPredicted RBP12□□□□□ -0.49
SMARCA4-209ENST00000586122 KLF18A0A0U1RQI7 1052 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 MYADML2A6NDP7 307 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 GOLGA8AA7E2F4 631 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 GOLGA8BA8MQT2 603 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 RXRAP19793 462 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 CASTP20810 708 aaKnown RBP12□□□□□ -0.49
SMARCA4-209ENST00000586122 COL9A3Q14050 684 aaPredicted RBP12□□□□□ -0.49
SMARCA4-209ENST00000586122 TRIM60Q495X7 471 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 HABP4Q5JVS0 413 aaKnown RBP12□□□□□ -0.49
SMARCA4-209ENST00000586122 PPP1R18Q6NYC8 613 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 XRRA1Q6P2D8 792 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 ANKRD33Q7Z3H0 272 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 GDF15Q99988 308 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 LBHD1Q9BQE6 289 aaPredicted RBP12□□□□□ -0.49
SMARCA4-209ENST00000586122 PDCD2LQ9BRP1 358 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 BRPF3Q9ULD4 1205 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 ZMYND8Q9ULU4 1186 aaPredicted RBP12□□□□□ -0.49
SMARCA4-209ENST00000586122 COLQQ9Y215 455 aaPredicted RBP12□□□□□ -0.49
SMARCA4-209ENST00000586122 FRMPD4Q14CM0 1322 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 LTBP2Q14767 1821 aa12□□□□□ -0.49
SMARCA4-209ENST00000586122 SCN10AQ9Y5Y9 1956 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 DCDC2CA8MYV0 355 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 CLTBP09497 229 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 TXNP10599 105 aaKnown RBP11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 TGFB3P10600 412 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 EIF2AK2P19525 551 aaKnown RBP11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 CCND2P30279 289 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 EVCP57679 992 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 ANAPC15P60006 121 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 TLE2Q04725 743 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 PGM5Q15124 567 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 CCDC62Q6P9F0 684 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 Q6ZUG5 572 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 RUFY3Q7L099 469 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 VSIG10LQ86VR7 867 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 OR6J1Q8NGC5 347 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 SMARCC2Q8TAQ2 1214 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 BRF1Q92994 677 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 VTI1AQ96AJ9 217 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 GLT8D2Q9H1C3 349 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 ZSWIM6Q9HCJ5 1215 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 CYP46A1Q9Y6A2 500 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 DDX49Q9Y6V7 483 aaKnown RBP11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 CNTNAP5Q8WYK1 1306 aa11.99□□□□□ -0.49
SMARCA4-209ENST00000586122 MYH7BA7E2Y1 1941 aa11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 A6NJR5 290 aa11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 ARVCFO00192 962 aa11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 TLR3O15455 904 aaKnown RBP11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 GH1P01241 217 aa11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 SYN1P17600 705 aa11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 HOXA13P31271 388 aaPredicted RBP11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 METAP2P50579 478 aaKnown RBP eCLIP11.98□□□□□ -0.491e-7■■□□□ 11.8
SMARCA4-209ENST00000586122 CDK7P50613 346 aa11.98□□□□□ -0.49
SMARCA4-209ENST00000586122 BEX3Q00994 111 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms