RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 NECAB3Q96P71 396 aaPredicted RBP12.24□□□□□ -0.45
CASC3-210ENST00000584997 TMEM47Q9BQJ4 181 aa12.24□□□□□ -0.45
CASC3-210ENST00000584997 SUPT16HQ9Y5B9 1047 aaKnown RBP12.24□□□□□ -0.45
CASC3-210ENST00000584997 KIF28PB7ZC32 967 aa12.23□□□□□ -0.45
CASC3-210ENST00000584997 RFXAPO00287 272 aa12.23□□□□□ -0.45
CASC3-210ENST00000584997 KPNA6O60684 536 aa12.23□□□□□ -0.45
CASC3-210ENST00000584997 IQCF3P0C7M6 154 aa12.23□□□□□ -0.45
CASC3-210ENST00000584997 TXNP10599 105 aaKnown RBP12.23□□□□□ -0.45
CASC3-210ENST00000584997 BMP1P13497 986 aa12.23□□□□□ -0.45
CASC3-210ENST00000584997 KCNQ1P51787 676 aa12.23□□□□□ -0.45
CASC3-210ENST00000584997 RPS6P62753 249 aaKnown RBP12.23□□□□□ -0.45
CASC3-210ENST00000584997 MAPK8IP2Q13387 824 aaPredicted RBP12.23□□□□□ -0.45
CASC3-210ENST00000584997 DNERQ8NFT8 737 aa12.23□□□□□ -0.45
CASC3-210ENST00000584997 PHOSPHO2Q8TCD6 241 aa12.23□□□□□ -0.45
CASC3-210ENST00000584997 PPP1R13LQ8WUF5 828 aa12.23□□□□□ -0.45
CASC3-210ENST00000584997 ARNTL2Q8WYA1 636 aa12.23□□□□□ -0.45
CASC3-210ENST00000584997 MTCH2Q9Y6C9 303 aa12.23□□□□□ -0.45
CASC3-210ENST00000584997 XIRP2A4UGR9 3374 aa12.22□□□□□ -0.45
CASC3-210ENST00000584997 A6NJR5 290 aa12.22□□□□□ -0.45
CASC3-210ENST00000584997 FGRP09769 529 aa12.22□□□□□ -0.45
CASC3-210ENST00000584997 PDHBP11177 359 aa12.22□□□□□ -0.45
CASC3-210ENST00000584997 POU3F3P20264 500 aaPredicted RBP12.22□□□□□ -0.45
CASC3-210ENST00000584997 PTPN11Q06124 597 aaPredicted RBP12.22□□□□□ -0.45
CASC3-210ENST00000584997 ALX1Q15699 326 aa12.22□□□□□ -0.45
CASC3-210ENST00000584997 CCDC155Q8N6L0 562 aa12.22□□□□□ -0.45
CASC3-210ENST00000584997 CLEC4DQ8WXI8 215 aa12.22□□□□□ -0.45
CASC3-210ENST00000584997 COPS5Q92905 334 aa12.22□□□□□ -0.45
CASC3-210ENST00000584997 EVI5LQ96CN4 794 aa12.22□□□□□ -0.45
CASC3-210ENST00000584997 C1QTNF1Q9BXJ1 281 aa12.22□□□□□ -0.45
CASC3-210ENST00000584997 HELLSQ9NRZ9 838 aa12.22□□□□□ -0.45
CASC3-210ENST00000584997 MYH6P13533 1939 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 BRWD1Q9NSI6 2320 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 WDR19Q8NEZ3 1342 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 EPOPA6NHQ4 379 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 BAIAP3O94812 1187 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 FGAP02671 866 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 EDNRBP24530 442 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 KCNJ6P48051 423 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 TAP1Q03518 808 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 ZNF543Q08ER8 600 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 USH1GQ495M9 461 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 HERC6Q8IVU3 1022 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 TCP11L1Q9NUJ3 509 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 COG5Q9UP83 839 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 PCDHB15Q9Y5E8 787 aa12.21□□□□□ -0.45
CASC3-210ENST00000584997 PTPRSQ13332 1948 aa12.21□□□□□ -0.46
CASC3-210ENST00000584997 COL4A4P53420 1690 aaPredicted RBP12.2□□□□□ -0.46
CASC3-210ENST00000584997 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
CASC3-210ENST00000584997 KIAA1217Q5T5P2 1943 aa12.2□□□□□ -0.46
CASC3-210ENST00000584997 TLL1O43897 1013 aa12.2□□□□□ -0.46
CASC3-210ENST00000584997 PLA2G5P39877 138 aa12.2□□□□□ -0.46
CASC3-210ENST00000584997 HAND2P61296 217 aa12.2□□□□□ -0.46
CASC3-210ENST00000584997 IRX6P78412 446 aaPredicted RBP12.2□□□□□ -0.46
CASC3-210ENST00000584997 PTGISQ16647 500 aa12.2□□□□□ -0.46
CASC3-210ENST00000584997 KRT40Q6A162 431 aa12.2□□□□□ -0.46
CASC3-210ENST00000584997 MFSD6Q6ZSS7 791 aa12.2□□□□□ -0.46
CASC3-210ENST00000584997 CAGE1Q8TC20 777 aa12.2□□□□□ -0.46
CASC3-210ENST00000584997 FAM122AQ96E09 287 aa12.2□□□□□ -0.46
CASC3-210ENST00000584997 TTC14Q96N46 770 aa12.2□□□□□ -0.46
CASC3-210ENST00000584997 ZMYM6O95789 1325 aa12.19□□□□□ -0.46
CASC3-210ENST00000584997 A0A0D9SFI3 127 aa12.19□□□□□ -0.46
CASC3-210ENST00000584997 ARHGEF15O94989 841 aa12.19□□□□□ -0.46
CASC3-210ENST00000584997 ARIH2O95376 493 aa12.19□□□□□ -0.46
CASC3-210ENST00000584997 GH1P01241 217 aa12.19□□□□□ -0.46
CASC3-210ENST00000584997 HSPD1P10809 573 aaKnown RBP12.19□□□□□ -0.46
CASC3-210ENST00000584997 MCMDC2Q4G0Z9 681 aa12.19□□□□□ -0.46
CASC3-210ENST00000584997 GPATCH4Q5T3I0 446 aaKnown RBP12.19□□□□□ -0.46
CASC3-210ENST00000584997 ANKRD45Q5TZF3 282 aa12.19□□□□□ -0.46
CASC3-210ENST00000584997 CHST3Q7LGC8 479 aa12.19□□□□□ -0.46
CASC3-210ENST00000584997 AFAP1L1Q8TED9 768 aa12.19□□□□□ -0.46
CASC3-210ENST00000584997 AFG1LQ8WV93 481 aa12.19□□□□□ -0.46
CASC3-210ENST00000584997 HLA-CQ95604 372 aa12.19□□□□□ -0.46
CASC3-210ENST00000584997 FAM227BQ96M60 508 aa12.19□□□□□ -0.46
CASC3-210ENST00000584997 ZBED2Q9BTP6 218 aa12.19□□□□□ -0.46
CASC3-210ENST00000584997 MMP3P08254 477 aa12.18□□□□□ -0.46
CASC3-210ENST00000584997 GOLGA8HP0CJ92 632 aa12.18□□□□□ -0.46
CASC3-210ENST00000584997 SNHG28P0DPA3 235 aa12.18□□□□□ -0.46
CASC3-210ENST00000584997 PCP11498 1178 aaKnown RBP12.18□□□□□ -0.46
CASC3-210ENST00000584997 CASTP20810 708 aaKnown RBP12.18□□□□□ -0.46
CASC3-210ENST00000584997 WDR5P61964 334 aaKnown RBP12.18□□□□□ -0.46
CASC3-210ENST00000584997 GRB10Q13322 594 aa12.18□□□□□ -0.46
CASC3-210ENST00000584997 CDC37Q16543 378 aaPredicted RBP12.18□□□□□ -0.46
CASC3-210ENST00000584997 LY6KQ17RY6 165 aa12.18□□□□□ -0.46
CASC3-210ENST00000584997 SEPT14Q6ZU15 432 aa12.18□□□□□ -0.46
CASC3-210ENST00000584997 RNF41Q9H4P4 317 aaPredicted RBP12.18□□□□□ -0.46
CASC3-210ENST00000584997 ABCB11O95342 1321 aa12.17□□□□□ -0.46
CASC3-210ENST00000584997 CCDC171Q6TFL3 1326 aa12.17□□□□□ -0.46
CASC3-210ENST00000584997 PARNO95453 639 aaKnown RBP12.17□□□□□ -0.46
CASC3-210ENST00000584997 SELPP16109 830 aa12.17□□□□□ -0.46
CASC3-210ENST00000584997 PDE1AP54750 535 aa12.17□□□□□ -0.46
CASC3-210ENST00000584997 GDF6Q6KF10 455 aaPredicted RBP12.17□□□□□ -0.46
CASC3-210ENST00000584997 CNKSR3Q6P9H4 555 aa12.17□□□□□ -0.46
CASC3-210ENST00000584997 LRRC8DQ7L1W4 858 aa12.17□□□□□ -0.46
CASC3-210ENST00000584997 SPRED2Q7Z698 418 aa12.17□□□□□ -0.46
CASC3-210ENST00000584997 ZNF589Q86UQ0 364 aaPredicted RBP12.17□□□□□ -0.46
CASC3-210ENST00000584997 SESTD1Q86VW0 696 aa12.17□□□□□ -0.46
CASC3-210ENST00000584997 MCF2L2Q86YR7 1114 aa12.17□□□□□ -0.46
CASC3-210ENST00000584997 RGS22Q8NE09 1264 aa12.17□□□□□ -0.46
CASC3-210ENST00000584997 NSUN6Q8TEA1 469 aaKnown RBP12.17□□□□□ -0.46
CASC3-210ENST00000584997 GDPD5Q8WTR4 605 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms