RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 CYP3A7P24462 503 aa16.62■□□□□ 0.25
SENP3-208ENST00000583277 GCLCP48506 637 aaPredicted RBP16.62■□□□□ 0.25
SENP3-208ENST00000583277 RPS6P62753 249 aaKnown RBP16.62■□□□□ 0.25
SENP3-208ENST00000583277 POTEEQ6S8J3 1075 aa16.62■□□□□ 0.25
SENP3-208ENST00000583277 NSMFQ6X4W1 530 aa16.62■□□□□ 0.25
SENP3-208ENST00000583277 CCAR1Q8IX12 1150 aaKnown RBP16.62■□□□□ 0.25
SENP3-208ENST00000583277 C4orf32Q8N8J7 132 aa16.62■□□□□ 0.25
SENP3-208ENST00000583277 FSIP1Q8NA03 581 aa16.62■□□□□ 0.25
SENP3-208ENST00000583277 SYTL5Q8TDW5 730 aaPredicted RBP16.62■□□□□ 0.25
SENP3-208ENST00000583277 DDX25Q9UHL0 483 aaKnown RBP16.62■□□□□ 0.25
SENP3-208ENST00000583277 PFASO15067 1338 aa16.62■□□□□ 0.25
SENP3-208ENST00000583277 FRMPD4Q14CM0 1322 aa16.62■□□□□ 0.25
SENP3-208ENST00000583277 RPTORQ8N122 1335 aa16.62■□□□□ 0.25
SENP3-208ENST00000583277 CNMDO75829 334 aa16.61■□□□□ 0.25
SENP3-208ENST00000583277 TDP2O95551 362 aa16.61■□□□□ 0.25
SENP3-208ENST00000583277 CIITAP33076 1130 aa16.61■□□□□ 0.25
SENP3-208ENST00000583277 TPRNQ4KMQ1 711 aa16.61■□□□□ 0.25
SENP3-208ENST00000583277 MBOAT7Q96N66 472 aa16.61■□□□□ 0.25
SENP3-208ENST00000583277 INHBEP58166 350 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 CALCRLQ16602 461 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 RESP18Q5W5W9 173 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 SLC30A10Q6XR72 485 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 DTHD1Q6ZMT9 781 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.6■□□□□ 0.25
SENP3-208ENST00000583277 FAM43AQ8N2R8 423 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 ZNF784Q8NCA9 323 aaPredicted RBP16.6■□□□□ 0.25
SENP3-208ENST00000583277 DDX19AQ9NUU7 478 aaKnown RBP16.6■□□□□ 0.25
SENP3-208ENST00000583277 RBPJLQ9UBG7 517 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 SLC37A4O43826 429 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 EDIL3O43854 480 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 CYP2C8P10632 490 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 LONP1P36776 959 aaKnown RBP16.6■□□□□ 0.25
SENP3-208ENST00000583277 ERVK-9P63128 1117 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 ERVK-24P63145 666 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 CCNA1P78396 465 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 FAM160A1Q05DH4 1040 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 SREBF2Q12772 1141 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 Q4G0T1 1027 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 CAVIN1Q6NZI2 390 aaKnown RBP16.6■□□□□ 0.25
SENP3-208ENST00000583277 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 SHCBP1Q8NEM2 672 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 CLIC6Q96NY7 704 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 MOV10L1Q9BXT6 1211 aaKnown RBP16.6■□□□□ 0.25
SENP3-208ENST00000583277 TMEM60Q9H2L4 133 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 TXNRD2Q9NNW7 524 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 A1CFQ9NQ94 594 aaKnown RBP16.6■□□□□ 0.25
SENP3-208ENST00000583277 FAM13BQ9NYF5 915 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 CYP39A1Q9NYL5 469 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 COL20A1Q9P218 1284 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 MRVI1Q9Y6F6 885 aa16.6■□□□□ 0.25
SENP3-208ENST00000583277 LCTP09848 1927 aa16.59■□□□□ 0.25
SENP3-208ENST00000583277 FAM237AA0A1B0GTK4 181 aa16.59■□□□□ 0.25
SENP3-208ENST00000583277 VWA3AA6NCI4 1184 aa16.59■□□□□ 0.25
SENP3-208ENST00000583277 LIG1P18858 919 aa16.59■□□□□ 0.25
SENP3-208ENST00000583277 ZNF76P36508 570 aa16.59■□□□□ 0.25
SENP3-208ENST00000583277 BAATQ14032 418 aaPredicted RBP16.59■□□□□ 0.25
SENP3-208ENST00000583277 SHC4Q6S5L8 630 aa16.59■□□□□ 0.25
SENP3-208ENST00000583277 NCAPG2Q86XI2 1143 aa16.59■□□□□ 0.25
SENP3-208ENST00000583277 GPRC5AQ8NFJ5 357 aa16.59■□□□□ 0.25
SENP3-208ENST00000583277 PTPN18Q99952 460 aa16.59■□□□□ 0.25
SENP3-208ENST00000583277 CSRNP2Q9H175 543 aa16.59■□□□□ 0.25
SENP3-208ENST00000583277 MROH8Q9H579 483 aa16.59■□□□□ 0.25
SENP3-208ENST00000583277 FAM155AB1AL88 458 aaPredicted RBP16.58■□□□□ 0.24
SENP3-208ENST00000583277 TBX3O15119 743 aa16.58■□□□□ 0.24
SENP3-208ENST00000583277 ERCC3P19447 782 aa16.58■□□□□ 0.24
SENP3-208ENST00000583277 SETQ01105 290 aaPredicted RBP16.58■□□□□ 0.24
SENP3-208ENST00000583277 TMEM266Q2M3C6 531 aa16.58■□□□□ 0.24
SENP3-208ENST00000583277 CCDC183Q5T5S1 534 aa16.58■□□□□ 0.24
SENP3-208ENST00000583277 PCNX4Q63HM2 1172 aa16.58■□□□□ 0.24
SENP3-208ENST00000583277 XRRA1Q6P2D8 792 aa16.58■□□□□ 0.24
SENP3-208ENST00000583277 ANKRD35Q8N283 1001 aa16.58■□□□□ 0.24
SENP3-208ENST00000583277 AK8Q96MA6 479 aa16.58■□□□□ 0.24
SENP3-208ENST00000583277 MTMR9Q96QG7 549 aa16.58■□□□□ 0.24
SENP3-208ENST00000583277 RMDN3Q96TC7 470 aa16.58■□□□□ 0.24
SENP3-208ENST00000583277 RAB34Q9BZG1 259 aa16.58■□□□□ 0.24
SENP3-208ENST00000583277 GOLPH3LQ9H4A5 285 aa16.58■□□□□ 0.24
SENP3-208ENST00000583277 MORF4L1Q9UBU8 362 aa16.58■□□□□ 0.24
SENP3-208ENST00000583277 A0A1B0GVL5 298 aa16.57■□□□□ 0.24
SENP3-208ENST00000583277 KINO60870 393 aaKnown RBP16.57■□□□□ 0.24
SENP3-208ENST00000583277 PFKFB1P16118 471 aa16.57■□□□□ 0.24
SENP3-208ENST00000583277 TXLNAP40222 546 aa16.57■□□□□ 0.24
SENP3-208ENST00000583277 GRIN1Q05586 938 aa16.57■□□□□ 0.24
SENP3-208ENST00000583277 PRR16Q569H4 304 aa16.57■□□□□ 0.24
SENP3-208ENST00000583277 ARHGEF16Q5VV41 709 aa16.57■□□□□ 0.24
SENP3-208ENST00000583277 SLFN12Q8IYM2 578 aa16.57■□□□□ 0.24
SENP3-208ENST00000583277 NSUN6Q8TEA1 469 aaKnown RBP16.57■□□□□ 0.24
SENP3-208ENST00000583277 KCNMB3Q9NPA1 279 aa16.57■□□□□ 0.24
SENP3-208ENST00000583277 PXMP2Q9NR77 195 aa16.57■□□□□ 0.24
SENP3-208ENST00000583277 DACT1Q9NYF0 836 aa16.57■□□□□ 0.24
SENP3-208ENST00000583277 HPSEQ9Y251 543 aa16.57■□□□□ 0.24
SENP3-208ENST00000583277 PLXNB2O15031 1838 aa16.57■□□□□ 0.24
SENP3-208ENST00000583277 FAM86B1E9PN63 330 aa16.56■□□□□ 0.24
SENP3-208ENST00000583277 MARCH6O60337 910 aa16.56■□□□□ 0.24
SENP3-208ENST00000583277 NR1I2O75469 434 aa16.56■□□□□ 0.24
SENP3-208ENST00000583277 FAM86B2P0C5J1 330 aa16.56■□□□□ 0.24
SENP3-208ENST00000583277 FXR2P51116 673 aaKnown RBP eCLIP16.56■□□□□ 0.24
SENP3-208ENST00000583277 NDUFA8P51970 172 aa16.56■□□□□ 0.24
SENP3-208ENST00000583277 FAM110CQ1W6H9 321 aa16.56■□□□□ 0.24
SENP3-208ENST00000583277 CEP55Q53EZ4 464 aa16.56■□□□□ 0.24
SENP3-208ENST00000583277 NIPA1Q7RTP0 329 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms