RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 PDE4DQ08499 809 aa15.96■□□□□ 0.15
SS18-222ENST00000582792 DNERQ8NFT8 737 aa15.96■□□□□ 0.15
SS18-222ENST00000582792 SCFD2Q8WU76 684 aa15.96■□□□□ 0.15
SS18-222ENST00000582792 MPHOSPH6Q99547 160 aaKnown RBP15.96■□□□□ 0.15
SS18-222ENST00000582792 HELLSQ9NRZ9 838 aa15.96■□□□□ 0.15
SS18-222ENST00000582792 TOMM22Q9NS69 142 aa15.96■□□□□ 0.15
SS18-222ENST00000582792 WDR19Q8NEZ3 1342 aa15.95■□□□□ 0.14
SS18-222ENST00000582792 PRRC2BQ5JSZ5 2229 aaKnown RBP15.95■□□□□ 0.14
SS18-222ENST00000582792 TCF20Q9UGU0 1960 aaKnown RBP15.95■□□□□ 0.14
SS18-222ENST00000582792 GTPBP6O43824 516 aaPredicted RBP15.95■□□□□ 0.14
SS18-222ENST00000582792 FGAP02671 866 aa15.95■□□□□ 0.14
SS18-222ENST00000582792 RRP12Q5JTH9 1297 aaKnown RBP15.95■□□□□ 0.14
SS18-222ENST00000582792 RETREG2Q8NC44 543 aa15.95■□□□□ 0.14
SS18-222ENST00000582792 COPS5Q92905 334 aa15.95■□□□□ 0.14
SS18-222ENST00000582792 EVI5LQ96CN4 794 aa15.95■□□□□ 0.14
SS18-222ENST00000582792 NECAB3Q96P71 396 aaPredicted RBP15.95■□□□□ 0.14
SS18-222ENST00000582792 EPOPA6NHQ4 379 aa15.94■□□□□ 0.14
SS18-222ENST00000582792 TXNP10599 105 aaKnown RBP15.94■□□□□ 0.14
SS18-222ENST00000582792 KCNQ1P51787 676 aa15.94■□□□□ 0.14
SS18-222ENST00000582792 TAP1Q03518 808 aa15.94■□□□□ 0.14
SS18-222ENST00000582792 ZNF543Q08ER8 600 aa15.94■□□□□ 0.14
SS18-222ENST00000582792 BFSP2Q13515 415 aa15.94■□□□□ 0.14
SS18-222ENST00000582792 SKIV2LQ15477 1246 aaKnown RBP15.94■□□□□ 0.14
SS18-222ENST00000582792 PPP1R13LQ8WUF5 828 aa15.94■□□□□ 0.14
SS18-222ENST00000582792 TTC14Q96N46 770 aa15.94■□□□□ 0.14
SS18-222ENST00000582792 FTOQ9C0B1 505 aaKnown RBP eCLIP15.94■□□□□ 0.14
SS18-222ENST00000582792 CERS4Q9HA82 394 aa15.94■□□□□ 0.14
SS18-222ENST00000582792 ZMYM6O95789 1325 aa15.94■□□□□ 0.14
SS18-222ENST00000582792 B4DLN1 442 aa15.93■□□□□ 0.14
SS18-222ENST00000582792 ARIH2O95376 493 aa15.93■□□□□ 0.14
SS18-222ENST00000582792 SNHG28P0DPA3 235 aa15.93■□□□□ 0.14
SS18-222ENST00000582792 MRPL12P52815 198 aaKnown RBP15.93■□□□□ 0.14
SS18-222ENST00000582792 HERC6Q8IVU3 1022 aa15.93■□□□□ 0.14
SS18-222ENST00000582792 EXOC6Q8TAG9 804 aa15.93■□□□□ 0.14
SS18-222ENST00000582792 NOD1Q9Y239 953 aa15.93■□□□□ 0.14
SS18-222ENST00000582792 TET1Q8NFU7 2136 aa15.92■□□□□ 0.14
SS18-222ENST00000582792 A0A0D9SFI3 127 aa15.92■□□□□ 0.14
SS18-222ENST00000582792 KIF28PB7ZC32 967 aa15.92■□□□□ 0.14
SS18-222ENST00000582792 BAIAP3O94812 1187 aa15.92■□□□□ 0.14
SS18-222ENST00000582792 ARHGEF15O94989 841 aa15.92■□□□□ 0.14
SS18-222ENST00000582792 MCMDC2Q4G0Z9 681 aa15.92■□□□□ 0.14
SS18-222ENST00000582792 RGS22Q8NE09 1264 aa15.92■□□□□ 0.14
SS18-222ENST00000582792 ARNTL2Q8WYA1 636 aa15.92■□□□□ 0.14
SS18-222ENST00000582792 FAM227BQ96M60 508 aa15.92■□□□□ 0.14
SS18-222ENST00000582792 COG5Q9UP83 839 aa15.92■□□□□ 0.14
SS18-222ENST00000582792 HSPD1P10809 573 aaKnown RBP15.91■□□□□ 0.14
SS18-222ENST00000582792 PCP11498 1178 aaKnown RBP15.91■□□□□ 0.14
SS18-222ENST00000582792 PTGISQ16647 500 aa15.91■□□□□ 0.14
SS18-222ENST00000582792 KRT40Q6A162 431 aa15.91■□□□□ 0.14
SS18-222ENST00000582792 CCDC62Q6P9F0 684 aa15.91■□□□□ 0.14
SS18-222ENST00000582792 TICAM2Q86XR7 235 aa15.91■□□□□ 0.14
SS18-222ENST00000582792 CCDC155Q8N6L0 562 aa15.91■□□□□ 0.14
SS18-222ENST00000582792 CAGE1Q8TC20 777 aa15.91■□□□□ 0.14
SS18-222ENST00000582792 C1QTNF1Q9BXJ1 281 aa15.91■□□□□ 0.14
SS18-222ENST00000582792 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
SS18-222ENST00000582792 PTPRSQ13332 1948 aa15.9■□□□□ 0.14
SS18-222ENST00000582792 PLA2G5P39877 138 aa15.9■□□□□ 0.14
SS18-222ENST00000582792 PDE1AP54750 535 aa15.9■□□□□ 0.14
SS18-222ENST00000582792 HAND2P61296 217 aa15.9■□□□□ 0.14
SS18-222ENST00000582792 HDAC1Q13547 482 aaPredicted RBP15.9■□□□□ 0.14
SS18-222ENST00000582792 USH1GQ495M9 461 aa15.9■□□□□ 0.14
SS18-222ENST00000582792 GPATCH4Q5T3I0 446 aaKnown RBP15.9■□□□□ 0.14
SS18-222ENST00000582792 ANKRD45Q5TZF3 282 aa15.9■□□□□ 0.14
SS18-222ENST00000582792 MFSD6Q6ZSS7 791 aa15.9■□□□□ 0.14
SS18-222ENST00000582792 ZNF589Q86UQ0 364 aaPredicted RBP15.9■□□□□ 0.14
SS18-222ENST00000582792 SESTD1Q86VW0 696 aa15.9■□□□□ 0.14
SS18-222ENST00000582792 AFAP1L1Q8TED9 768 aa15.9■□□□□ 0.14
SS18-222ENST00000582792 MAF1Q9H063 256 aa15.9■□□□□ 0.14
SS18-222ENST00000582792 TRIP12Q14669 1992 aaPredicted RBP15.89■□□□□ 0.13
SS18-222ENST00000582792 COL4A4P53420 1690 aaPredicted RBP15.89■□□□□ 0.13
SS18-222ENST00000582792 TLL1O43897 1013 aa15.89■□□□□ 0.13
SS18-222ENST00000582792 MMP3P08254 477 aa15.89■□□□□ 0.13
SS18-222ENST00000582792 KCNJ6P48051 423 aa15.89■□□□□ 0.13
SS18-222ENST00000582792 CHMP4BP1P59074 171 aa15.89■□□□□ 0.13
SS18-222ENST00000582792 GRB10Q13322 594 aa15.89■□□□□ 0.13
SS18-222ENST00000582792 GPNMBQ14956 572 aa15.89■□□□□ 0.13
SS18-222ENST00000582792 GDF6Q6KF10 455 aaPredicted RBP15.89■□□□□ 0.13
SS18-222ENST00000582792 AFG1LQ8WV93 481 aa15.89■□□□□ 0.13
SS18-222ENST00000582792 HLA-CQ95604 372 aa15.89■□□□□ 0.13
SS18-222ENST00000582792 CTAGE1Q96RT6 745 aa15.89■□□□□ 0.13
SS18-222ENST00000582792 LPXNO60711 386 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 PARNO95453 639 aaKnown RBP15.88■□□□□ 0.13
SS18-222ENST00000582792 GH1P01241 217 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 GOLGA8HP0CJ92 632 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 WDR5P61964 334 aaKnown RBP15.88■□□□□ 0.13
SS18-222ENST00000582792 ARHGAP1Q07960 439 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 RBL2Q08999 1139 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 NMIQ13287 307 aaPredicted RBP15.88■□□□□ 0.13
SS18-222ENST00000582792 LY6KQ17RY6 165 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 LRRC8DQ7L1W4 858 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 SPRED2Q7Z698 418 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 TBC1D10CQ8IV04 446 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 TBC1D5Q92609 795 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 DHX38Q92620 1227 aaKnown RBP15.88■□□□□ 0.13
SS18-222ENST00000582792 KAT2BQ92831 832 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 UBA5Q9GZZ9 404 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 CPVLQ9H3G5 476 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 RNF41Q9H4P4 317 aaPredicted RBP15.88■□□□□ 0.13
SS18-222ENST00000582792 ABCB11O95342 1321 aa15.88■□□□□ 0.13
SS18-222ENST00000582792 CCDC171Q6TFL3 1326 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms