RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 BAG1Q99933 345 aaPredicted RBP11.27□□□□□ -0.6
TRAPPC8-211ENST00000582539 HOXC10Q9NYD6 342 aa11.27□□□□□ -0.6
TRAPPC8-211ENST00000582539 QSER1Q2KHR3 1735 aa11.27□□□□□ -0.6
TRAPPC8-211ENST00000582539 RHOBTB3O94955 611 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 TXNRD3Q86VQ6 643 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 CREBRFQ8IUR6 639 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 VSTM4Q8IW00 320 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 GPKOWQ92917 476 aaPredicted RBP eCLIP11.27□□□□□ -0.612e-6■■■■□ 21.7
TRAPPC8-211ENST00000582539 P2RX5Q93086 422 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 HVCN1Q96D96 273 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 BIN2Q9UBW5 565 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 KRT86O43790 486 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 RFX1P22670 979 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 CASQ1P31415 396 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 EZH2Q15910 746 aaKnown RBP11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 Q4G0T1 1027 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 METTL16Q86W50 562 aaKnown RBP11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 CEP112Q8N8E3 955 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 RIT2Q99578 217 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 TANGO6Q9C0B7 1094 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 KCNQ5Q9NR82 932 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 KCND1Q9NSA2 647 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 SLC5A4Q9NY91 659 aa11.27□□□□□ -0.61
TRAPPC8-211ENST00000582539 PIK3CDO00329 1044 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 GAS7O60861 476 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 CYP3A4P08684 503 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 SHMT1P34896 483 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 RDXP35241 583 aaKnown RBP11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 TCP10Q12799 353 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 C10orf76Q5T2E6 689 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 CEP135Q66GS9 1140 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 NEK11Q8NG66 645 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 FAM26FQ5R3K3 315 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 KIAA1328Q86T90 577 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 CCDC155Q8N6L0 562 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 TBC1D5Q92609 795 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 POLR3CQ9BUI4 534 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 TTC12Q9H892 705 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 CTNND2Q9UQB3 1225 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 CACNA1SQ13698 1873 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 ZC3H4Q9UPT8 1303 aaKnown RBP11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 ARHGEF35A5YM69 484 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 CCND2P30279 289 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 KRT76Q01546 638 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 QRICH1Q2TAL8 776 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 ATP6V0A1Q93050 837 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 SPON1Q9HCB6 807 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 SPTLC3Q9NUV7 552 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 R3HCC1Q9Y3T6 440 aaKnown RBP11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 CYP3A7-CYP3A51PA0A087WV96 503 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 ACTN4O43707 911 aaKnown RBP11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 CYP3A7P24462 503 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 DPYDQ12882 1025 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 MAP9Q49MG5 647 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 CCDC170Q8IYT3 715 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 RAD54LQ92698 747 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 TMEM206Q9H813 350 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 LIMA1Q9UHB6 759 aaKnown RBP11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 PNMA3Q9UL41 463 aa11.26□□□□□ -0.61
TRAPPC8-211ENST00000582539 TCP10L2B9ZVM9 353 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 GH2P01242 217 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 NAALADL2Q58DX5 795 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 SULF1Q8IWU6 871 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 IGSF22Q8N9C0 903 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 LARSQ9P2J5 1176 aaKnown RBP11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 CCPG1Q9ULG6 757 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 FRMPD2Q68DX3 1309 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 CCNA1P78396 465 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 MYBPC2Q14324 1141 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 PPP2R5AQ15172 486 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 MAN2A1Q16706 1144 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 LRRC8AQ8IWT6 810 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 KIAA1683Q9H0B3 1180 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 JMJD4Q9H9V9 463 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 ODF2LQ9ULJ1 636 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 KCNJ18B7U540 433 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 USP17L10C9JJH3 530 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 DPEP1P16444 411 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 OSBPP22059 807 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 FKBP3Q00688 224 aaKnown RBP11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 KCNJ12Q14500 433 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 ARMC9Q7Z3E5 817 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 AIFM3Q96NN9 605 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 CLIC6Q96NY7 704 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 XPO4Q9C0E2 1151 aaKnown RBP11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 IL17RBQ9NRM6 502 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 BCS1LQ9Y276 419 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 FRMD4BQ9Y2L6 1034 aa11.25□□□□□ -0.61
TRAPPC8-211ENST00000582539 SNED1Q8TER0 1413 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 SREBF1P36956 1147 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 DRC1Q96MC2 740 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 TDRD3Q9H7E2 651 aaKnown RBP11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 IQCA1LA6NCM1 817 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 ARHGAP4P98171 946 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 UBXN1Q04323 297 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 EPHA7Q15375 998 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 TNFRSF25Q93038 417 aa11.24□□□□□ -0.61
TRAPPC8-211ENST00000582539 NRXN2Q9P2S2 1712 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms