RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 RBL2Q08999 1139 aa11.05□□□□□ -0.64
GGA3-212ENST00000582376 HYAL1Q12794 435 aa11.05□□□□□ -0.64
GGA3-212ENST00000582376 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
GGA3-212ENST00000582376 CBX2Q14781 532 aaPredicted RBP11.05□□□□□ -0.64
GGA3-212ENST00000582376 TTF1Q15361 905 aaPredicted RBP11.05□□□□□ -0.64
GGA3-212ENST00000582376 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.05□□□□□ -0.64
GGA3-212ENST00000582376 DGLUCYQ7Z3D6 616 aa11.05□□□□□ -0.64
GGA3-212ENST00000582376 DHX38Q92620 1227 aaKnown RBP11.05□□□□□ -0.64
GGA3-212ENST00000582376 TRERF1Q96PN7 1200 aa11.05□□□□□ -0.64
GGA3-212ENST00000582376 YME1L1Q96TA2 773 aa11.05□□□□□ -0.64
GGA3-212ENST00000582376 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.05□□□□□ -0.64
GGA3-212ENST00000582376 ZNF532Q9HCE3 1301 aa11.05□□□□□ -0.64
GGA3-212ENST00000582376 E9PSI1 815 aa11.04□□□□□ -0.64
GGA3-212ENST00000582376 NKRFO15226 690 aaKnown RBP eCLIP11.04□□□□□ -0.64
GGA3-212ENST00000582376 PRKAB2O43741 272 aa11.04□□□□□ -0.64
GGA3-212ENST00000582376 CKBP12277 381 aa11.04□□□□□ -0.64
GGA3-212ENST00000582376 MCTP2Q6DN12 878 aa11.04□□□□□ -0.64
GGA3-212ENST00000582376 GDF6Q6KF10 455 aaPredicted RBP11.04□□□□□ -0.64
GGA3-212ENST00000582376 CTAGE1Q96RT6 745 aa11.04□□□□□ -0.64
GGA3-212ENST00000582376 LMAN2LQ9H0V9 348 aa11.04□□□□□ -0.64
GGA3-212ENST00000582376 IGFLR1Q9H665 355 aa11.04□□□□□ -0.64
GGA3-212ENST00000582376 ARMT1Q9H993 441 aa11.04□□□□□ -0.64
GGA3-212ENST00000582376 CYP39A1Q9NYL5 469 aa11.04□□□□□ -0.64
GGA3-212ENST00000582376 CACNA1GO43497 2377 aa11.03□□□□□ -0.64
GGA3-212ENST00000582376 MYO7AQ13402 2215 aa11.03□□□□□ -0.64
GGA3-212ENST00000582376 RBM47A0AV96 593 aaKnown RBP11.03□□□□□ -0.64
GGA3-212ENST00000582376 A6NJR5 290 aa11.03□□□□□ -0.64
GGA3-212ENST00000582376 LGR5O75473 907 aa11.03□□□□□ -0.64
GGA3-212ENST00000582376 SURF6O75683 361 aaKnown RBP11.03□□□□□ -0.64
GGA3-212ENST00000582376 EYA4O95677 639 aa11.03□□□□□ -0.64
GGA3-212ENST00000582376 ALAS1P13196 640 aa11.03□□□□□ -0.64
GGA3-212ENST00000582376 NDUFV1P49821 464 aa11.03□□□□□ -0.64
GGA3-212ENST00000582376 SESTD1Q86VW0 696 aa11.03□□□□□ -0.64
GGA3-212ENST00000582376 EAF2Q96CJ1 260 aaPredicted RBP11.03□□□□□ -0.64
GGA3-212ENST00000582376 DDRGK1Q96HY6 314 aa11.03□□□□□ -0.64
GGA3-212ENST00000582376 CNTNAP3BQ96NU0 1288 aa11.03□□□□□ -0.64
GGA3-212ENST00000582376 CNTNAP3Q9BZ76 1288 aa11.03□□□□□ -0.64
GGA3-212ENST00000582376 CLIP2Q9UDT6 1046 aa11.03□□□□□ -0.64
GGA3-212ENST00000582376 LINC01565O15544 149 aa11.02□□□□□ -0.65
GGA3-212ENST00000582376 GTF2F1P35269 517 aaKnown RBP eCLIP11.02□□□□□ -0.65
GGA3-212ENST00000582376 ADAM15Q13444 863 aa11.02□□□□□ -0.65
GGA3-212ENST00000582376 POLA2Q14181 598 aa11.02□□□□□ -0.65
GGA3-212ENST00000582376 PPP2R5BQ15173 497 aa11.02□□□□□ -0.65
GGA3-212ENST00000582376 NSMFQ6X4W1 530 aa11.02□□□□□ -0.65
GGA3-212ENST00000582376 FRMD5Q7Z6J6 570 aa11.02□□□□□ -0.65
GGA3-212ENST00000582376 RPAP2Q8IXW5 612 aaPredicted RBP11.02□□□□□ -0.65
GGA3-212ENST00000582376 LRRC47Q8N1G4 583 aaKnown RBP11.02□□□□□ -0.65
GGA3-212ENST00000582376 MSLNLQ96KJ4 702 aa11.02□□□□□ -0.65
GGA3-212ENST00000582376 RIPOR3Q96MK2 946 aa11.02□□□□□ -0.65
GGA3-212ENST00000582376 ADD3Q9UEY8 706 aaKnown RBP11.02□□□□□ -0.65
GGA3-212ENST00000582376 ISY1Q9ULR0 285 aaKnown RBP11.02□□□□□ -0.65
GGA3-212ENST00000582376 MICAL3Q7RTP6 2002 aa11.02□□□□□ -0.65
GGA3-212ENST00000582376 GREB1LQ9C091 1923 aaPredicted RBP11.01□□□□□ -0.65
GGA3-212ENST00000582376 BAZ2AQ9UIF9 1905 aaKnown RBP11.01□□□□□ -0.65
GGA3-212ENST00000582376 LOC102724159A0A0B4J2E5 919 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 TCRBV5S4A2TA0A5A2 114 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 TMEM232C9JQI7 657 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 MBD4O95243 580 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 PDGFBP01127 241 aaPredicted RBP11.01□□□□□ -0.65
GGA3-212ENST00000582376 RB1P06400 928 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 BMP3P12645 472 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 ICAM3P32942 547 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 CTNNB1P35222 781 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 ALDH5A1P51649 535 aaPredicted RBP11.01□□□□□ -0.65
GGA3-212ENST00000582376 STAT2P52630 851 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 RRP1P56182 461 aaKnown RBP11.01□□□□□ -0.65
GGA3-212ENST00000582376 PWP2Q15269 919 aaKnown RBP11.01□□□□□ -0.65
GGA3-212ENST00000582376 MUM1L1Q5H9M0 696 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 ZNF618Q5T7W0 954 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 DBF4BQ8NFT6 615 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 COPS5Q92905 334 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 RMDN1Q96DB5 314 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 PURBQ96QR8 312 aaKnown RBP11.01□□□□□ -0.65
GGA3-212ENST00000582376 C11orf84Q9BUA3 381 aaPredicted RBP11.01□□□□□ -0.65
GGA3-212ENST00000582376 PHF7Q9BWX1 381 aaPredicted RBP11.01□□□□□ -0.65
GGA3-212ENST00000582376 INCENPQ9NQS7 918 aa11.01□□□□□ -0.65
GGA3-212ENST00000582376 NLRC5Q86WI3 1866 aa11□□□□□ -0.65
GGA3-212ENST00000582376 C5orf67F2Z3F1 127 aa11□□□□□ -0.65
GGA3-212ENST00000582376 GRM6O15303 877 aa11□□□□□ -0.65
GGA3-212ENST00000582376 UPP2O95045 317 aa11□□□□□ -0.65
GGA3-212ENST00000582376 RASA1P20936 1047 aa11□□□□□ -0.65
GGA3-212ENST00000582376 COASYQ13057 564 aa11□□□□□ -0.65
GGA3-212ENST00000582376 IKQ13123 557 aaPredicted RBP11□□□□□ -0.65
GGA3-212ENST00000582376 PTK7Q13308 1070 aa11□□□□□ -0.65
GGA3-212ENST00000582376 MBTPS1Q14703 1052 aa11□□□□□ -0.65
GGA3-212ENST00000582376 PTPN21Q16825 1174 aa11□□□□□ -0.65
GGA3-212ENST00000582376 SLFN13Q68D06 897 aa11□□□□□ -0.65
GGA3-212ENST00000582376 CTR9Q6PD62 1173 aa11□□□□□ -0.65
GGA3-212ENST00000582376 TRAF7Q6Q0C0 670 aa11□□□□□ -0.65
GGA3-212ENST00000582376 FAM160B2Q86V87 743 aa11□□□□□ -0.65
GGA3-212ENST00000582376 SMRP1Q8NCR6 262 aa11□□□□□ -0.65
GGA3-212ENST00000582376 GMCL1P1Q8NEA9 526 aa11□□□□□ -0.65
GGA3-212ENST00000582376 SSH3Q8TE77 659 aa11□□□□□ -0.65
GGA3-212ENST00000582376 SCFD2Q8WU76 684 aa11□□□□□ -0.65
GGA3-212ENST00000582376 CHURC1Q8WUH1 139 aa11□□□□□ -0.65
GGA3-212ENST00000582376 TOP1MTQ969P6 601 aa11□□□□□ -0.65
GGA3-212ENST00000582376 PPP2R3CQ969Q6 453 aa11□□□□□ -0.65
GGA3-212ENST00000582376 MKL1Q969V6 931 aa11□□□□□ -0.65
GGA3-212ENST00000582376 RPGRIP1Q96KN7 1286 aa11□□□□□ -0.65
GGA3-212ENST00000582376 GTF2IRD1Q9UHL9 959 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms