RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 SCN10AQ9Y5Y9 1956 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 GRIN2DO15399 1336 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 SPTBN4Q9H254 2564 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 E7EWF7 191 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 FOXP2O15409 715 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 PRKAB2O43741 272 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 ZEB2O60315 1214 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 ARHGEF15O94989 841 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 SEC24BO95487 1268 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 CHGBP05060 677 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 SUPT20HL2P0C7V6 817 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 IL9P15248 144 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 BEX3Q00994 111 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 PPP2R5BQ15173 497 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 SLFNL1Q499Z3 407 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 PTCRAQ6ISU1 281 aaPredicted RBP10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 RUFY3Q7L099 469 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 DHX32Q7L7V1 743 aaKnown RBP10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 TTC14Q96N46 770 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 TRPV6Q9H1D0 765 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 ZSWIM6Q9HCJ5 1215 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 FBXO28Q9NVF7 368 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 SNX14Q9Y5W7 946 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 NLRC5Q86WI3 1866 aa10.19□□□□□ -0.78
PDLIM1P3-201ENST00000582370 ASTN1O14525 1302 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 BAIAP3O94812 1187 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 KCNA5P22460 613 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 ANP32AP39687 249 aaKnown RBP10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 RCAN1P53805 252 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 PTPN5P54829 565 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 TNFAIP2Q03169 654 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 BECN1Q14457 450 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 FSCN1Q16658 493 aaKnown RBP10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 SNRNP48Q6IEG0 339 aaKnown RBP10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 HFE2Q6ZVN8 426 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 ARMCX2Q7L311 632 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 DEFB128Q7Z7B8 93 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 TLK2Q86UE8 772 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 SIAH1Q8IUQ4 282 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 GDPD5Q8WTR4 605 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 PRRX2Q99811 253 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 UBAC1Q9BSL1 405 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 KATNBL1Q9H079 304 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 TCP11L1Q9NUJ3 509 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 C5orf42Q9H799 3197 aa10.18□□□□□ -0.78
PDLIM1P3-201ENST00000582370 LCTP09848 1927 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 PLIN4Q96Q06 1357 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 TECTAO75443 2155 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 GRXCR2A6NFK2 248 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 TSPY2A6NKD2 308 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 ATP2A1O14983 1001 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 TSPY3P0CV98 308 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 TSPY8P0CW00 308 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 FGD1P98174 961 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 DGKHQ86XP1 1220 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 CLEC10AQ8IUN9 316 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 FGD4Q96M96 766 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 JAKMIP1Q96N16 626 aaKnown RBP10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 PHOX2BQ99453 314 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 GOPCQ9HD26 462 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 PRKAG3Q9UGI9 489 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 FBXO40Q9UH90 709 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 GNEQ9Y223 722 aaKnown RBP10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 FAM50BQ9Y247 325 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 ATG2AQ2TAZ0 1938 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 RALGAPA2Q2PPJ7 1873 aa10.17□□□□□ -0.78
PDLIM1P3-201ENST00000582370 TNKSO95271 1327 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 PITPNM1O00562 1244 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 DHX16O60231 1041 aaKnown RBP10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 CALM1P0DP23 149 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 CALM2P0DP24 149 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 CALM3P0DP25 149 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 PDIA4P13667 645 aaKnown RBP10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 AKR1B1P15121 316 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 CASTP20810 708 aaKnown RBP10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 RPS6KB1P23443 525 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 LIFRP42702 1097 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 KCNJ6P48051 423 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 CDK8P49336 464 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 SYNE3Q6ZMZ3 975 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 NOL8Q76FK4 1167 aaKnown RBP10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 SPRED2Q7Z698 418 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 CCDC144CPQ8IYA2 1237 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 ANKRD35Q8N283 1001 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 NEK9Q8TD19 979 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 SNX21Q969T3 373 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 ZSCAN31Q96LW9 406 aaPredicted RBP10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 SLF1Q9BQI6 1058 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 UPF3BQ9BZI7 483 aaKnown RBP10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 AP5M1Q9H0R1 490 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 KANSL2Q9H9L4 492 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 TOMM22Q9NS69 142 aa10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.16□□□□□ -0.78
PDLIM1P3-201ENST00000582370 PLXNA3P51805 1871 aa10.15□□□□□ -0.78
PDLIM1P3-201ENST00000582370 RANBP6O60518 1105 aaKnown RBP10.15□□□□□ -0.78
PDLIM1P3-201ENST00000582370 NEK4P51957 841 aa10.15□□□□□ -0.78
PDLIM1P3-201ENST00000582370 HAND2P61296 217 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms