RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 SGMS1Q86VZ5 419 aa14.6□□□□□ -0.07
CDK5RAP3-222ENST00000581708 SLC43A3Q8NBI5 491 aa14.6□□□□□ -0.07
CDK5RAP3-222ENST00000581708 POLR3EQ9NVU0 708 aa14.6□□□□□ -0.07
CDK5RAP3-222ENST00000581708 TLR3O15455 904 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-222ENST00000581708 EPB41L2O43491 1005 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-222ENST00000581708 PQBP1O60828 265 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-222ENST00000581708 EIF3JO75822 258 aaKnown RBP14.59□□□□□ -0.07
CDK5RAP3-222ENST00000581708 MDM2Q00987 491 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-222ENST00000581708 FAAP100Q0VG06 881 aa14.59□□□□□ -0.07
CDK5RAP3-222ENST00000581708 TTLL4Q14679 1199 aa14.59□□□□□ -0.07
CDK5RAP3-222ENST00000581708 ARHGEF16Q5VV41 709 aa14.59□□□□□ -0.07
CDK5RAP3-222ENST00000581708 TEX2Q8IWB9 1127 aa14.59□□□□□ -0.07
CDK5RAP3-222ENST00000581708 VTI1AQ96AJ9 217 aa14.59□□□□□ -0.07
CDK5RAP3-222ENST00000581708 SENP2Q9HC62 589 aa14.59□□□□□ -0.07
CDK5RAP3-222ENST00000581708 PRDM5Q9NQX1 630 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-222ENST00000581708 TMEM39AQ9NV64 488 aa14.59□□□□□ -0.07
CDK5RAP3-222ENST00000581708 TRIM43BA6NCK2 446 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 OPLAHO14841 1288 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 CYTH3O43739 400 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 PPP1R11O60927 126 aaPredicted RBP14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 CFBP00751 764 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 TXNP10599 105 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 RAG1P15918 1043 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 KCNV1Q6PIU1 500 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 NFXL1Q6ZNB6 911 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 TBC1D5Q92609 795 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 TRIM43Q96BQ3 446 aaPredicted RBP14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 RRP36Q96EU6 259 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 NEK1Q96PY6 1258 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 TAAR1Q96RJ0 339 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 PIGSQ96S52 555 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 PXMP2Q9NR77 195 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 COL20A1Q9P218 1284 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 TBX21Q9UL17 535 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 SLC12A7Q9Y666 1083 aa14.58□□□□□ -0.08
CDK5RAP3-222ENST00000581708 A6NJR5 290 aa14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 GCOM1H8Y6P7 765 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 NR3C2P08235 984 aa14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 POLR2MP0CAP2 368 aa14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 RCAN1P53805 252 aa14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 BEX3Q00994 111 aa14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 ITGA7Q13683 1181 aa14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 SLC35G1Q2M3R5 365 aa14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 CCDC62Q6P9F0 684 aa14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 CXCL17Q6UXB2 119 aa14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 SYNE3Q6ZMZ3 975 aa14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 DHX32Q7L7V1 743 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 HOMER1Q86YM7 354 aa14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 FAM126BQ8IXS8 530 aa14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 BADQ92934 168 aa14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 GPHNQ9NQX3 736 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 SEC63Q9UGP8 760 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-222ENST00000581708 STAM2O75886 525 aa14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 REC8O95072 547 aa14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 TIMP1P01033 207 aa14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 CD4P01730 458 aa14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 IRX5P78411 483 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 PURAQ00577 322 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 EXOSC10Q01780 885 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 SH3RF1Q7Z6J0 888 aa14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 VSIG10LQ86VR7 867 aa14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 FANCBQ8NB91 859 aa14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 OR6J1Q8NGC5 347 aa14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 KCNB2Q92953 911 aa14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 EMID1Q96A84 441 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 PDCD2LQ9BRP1 358 aa14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 MTG1Q9BT17 334 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 DDX49Q9Y6V7 483 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 BAZ2BQ9UIF8 2168 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-222ENST00000581708 KIAA1217Q5T5P2 1943 aa14.55□□□□□ -0.08
CDK5RAP3-222ENST00000581708 PIK3CDO00329 1044 aa14.55□□□□□ -0.08
CDK5RAP3-222ENST00000581708 GH1P01241 217 aa14.55□□□□□ -0.08
CDK5RAP3-222ENST00000581708 SUPT20HL2P0C7V6 817 aa14.55□□□□□ -0.08
CDK5RAP3-222ENST00000581708 TGFB3P10600 412 aa14.55□□□□□ -0.08
CDK5RAP3-222ENST00000581708 PTPN11Q06124 597 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-222ENST00000581708 MFSD5Q6N075 450 aa14.55□□□□□ -0.08
CDK5RAP3-222ENST00000581708 XRRA1Q6P2D8 792 aa14.55□□□□□ -0.08
CDK5RAP3-222ENST00000581708 SKAP1Q86WV1 359 aa14.55□□□□□ -0.08
CDK5RAP3-222ENST00000581708 RBM28Q9NW13 759 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-222ENST00000581708 LAMA3Q16787 3333 aa14.55□□□□□ -0.08
CDK5RAP3-222ENST00000581708 EIF2AK2P19525 551 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-222ENST00000581708 FPGSQ05932 587 aa14.54□□□□□ -0.08
CDK5RAP3-222ENST00000581708 LAMC2Q13753 1193 aa14.54□□□□□ -0.08
CDK5RAP3-222ENST00000581708 TMEM63BQ5T3F8 832 aa14.54□□□□□ -0.08
CDK5RAP3-222ENST00000581708 NFRKBQ6P4R8 1299 aa14.54□□□□□ -0.08
CDK5RAP3-222ENST00000581708 FBXL16Q8N461 479 aa14.54□□□□□ -0.08
CDK5RAP3-222ENST00000581708 DDX41Q9UJV9 622 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-222ENST00000581708 GRIN2DO15399 1336 aa14.54□□□□□ -0.08
CDK5RAP3-222ENST00000581708 FRMPD4Q14CM0 1322 aa14.54□□□□□ -0.08
CDK5RAP3-222ENST00000581708 CCND2P30279 289 aa14.53□□□□□ -0.08
CDK5RAP3-222ENST00000581708 HSPA4P34932 840 aa14.53□□□□□ -0.08
CDK5RAP3-222ENST00000581708 PPIGQ13427 754 aaKnown RBP eCLIP14.53□□□□□ -0.084e-9■■■■□ 24.8
CDK5RAP3-222ENST00000581708 PGM5Q15124 567 aa14.53□□□□□ -0.08
CDK5RAP3-222ENST00000581708 FAM109BQ6ICB4 259 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-222ENST00000581708 APOA5Q6Q788 366 aa14.53□□□□□ -0.08
CDK5RAP3-222ENST00000581708 SEPT14Q6ZU15 432 aa14.53□□□□□ -0.08
CDK5RAP3-222ENST00000581708 TMTC3Q6ZXV5 915 aa14.53□□□□□ -0.08
CDK5RAP3-222ENST00000581708 RASEFQ8IZ41 740 aa14.53□□□□□ -0.08
CDK5RAP3-222ENST00000581708 TMEM199Q8N511 208 aa14.53□□□□□ -0.08
CDK5RAP3-222ENST00000581708 SRBD1Q8N5C6 995 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms