RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 SEC63Q9UGP8 760 aaKnown RBP23.57■■□□□ 1.36
SNX11-209ENST00000581705 CTDP1Q9Y5B0 961 aaPredicted RBP23.57■■□□□ 1.36
SNX11-209ENST00000581705 BAZ2BQ9UIF8 2168 aaKnown RBP23.57■■□□□ 1.36
SNX11-209ENST00000581705 DNAJC25-GNG10A0A024R161 153 aa23.56■■□□□ 1.36
SNX11-209ENST00000581705 DDX11L8A8MPP1 907 aa23.56■■□□□ 1.36
SNX11-209ENST00000581705 MMP1P03956 469 aa23.56■■□□□ 1.36
SNX11-209ENST00000581705 OAZ1P54368 228 aa23.56■■□□□ 1.36
SNX11-209ENST00000581705 GALNT17Q6IS24 598 aa23.56■■□□□ 1.36
SNX11-209ENST00000581705 CCDC148Q8NFR7 591 aa23.56■■□□□ 1.36
SNX11-209ENST00000581705 CCDC12Q8WUD4 166 aaPredicted RBP23.56■■□□□ 1.36
SNX11-209ENST00000581705 AIFM3Q96NN9 605 aa23.56■■□□□ 1.36
SNX11-209ENST00000581705 RAVER2Q9HCJ3 691 aaKnown RBP23.56■■□□□ 1.36
SNX11-209ENST00000581705 FRMPD2Q68DX3 1309 aaPredicted RBP23.56■■□□□ 1.36
SNX11-209ENST00000581705 PLXNA1Q9UIW2 1896 aa23.55■■□□□ 1.36
SNX11-209ENST00000581705 TMEM232C9JQI7 657 aa23.55■■□□□ 1.36
SNX11-209ENST00000581705 FDX1P10109 184 aa23.55■■□□□ 1.36
SNX11-209ENST00000581705 CALML3P27482 149 aa23.55■■□□□ 1.36
SNX11-209ENST00000581705 MAGEA10P43363 369 aaPredicted RBP23.55■■□□□ 1.36
SNX11-209ENST00000581705 NFKBIBQ15653 356 aa23.55■■□□□ 1.36
SNX11-209ENST00000581705 MSL3Q8N5Y2 521 aaKnown RBP23.55■■□□□ 1.36
SNX11-209ENST00000581705 GPCPD1Q9NPB8 672 aa23.55■■□□□ 1.36
SNX11-209ENST00000581705 U2AF2P26368 475 aaKnown RBP eCLIP23.54■■□□□ 1.36
SNX11-209ENST00000581705 MCM4P33991 863 aa23.54■■□□□ 1.36
SNX11-209ENST00000581705 STAT2P52630 851 aa23.54■■□□□ 1.36
SNX11-209ENST00000581705 FOXD4L5Q5VV16 416 aaPredicted RBP23.54■■□□□ 1.36
SNX11-209ENST00000581705 RASGRP2Q7LDG7 609 aa23.54■■□□□ 1.36
SNX11-209ENST00000581705 FAM160B2Q86V87 743 aa23.54■■□□□ 1.36
SNX11-209ENST00000581705 CHURC1Q8WUH1 139 aa23.54■■□□□ 1.36
SNX11-209ENST00000581705 FOXD4L4Q8WXT5 416 aaPredicted RBP23.54■■□□□ 1.36
SNX11-209ENST00000581705 FOXP1Q9H334 677 aaPredicted RBP23.54■■□□□ 1.36
SNX11-209ENST00000581705 BRMS1Q9HCU9 246 aa23.54■■□□□ 1.36
SNX11-209ENST00000581705 BARHL2Q9NY43 387 aa23.54■■□□□ 1.36
SNX11-209ENST00000581705 KBTBD13C9JR72 458 aa23.53■■□□□ 1.36
SNX11-209ENST00000581705 ZNF865P0CJ78 1059 aaPredicted RBP23.53■■□□□ 1.36
SNX11-209ENST00000581705 TAL1P17542 331 aaPredicted RBP23.53■■□□□ 1.36
SNX11-209ENST00000581705 ATN1P54259 1190 aaPredicted RBP23.53■■□□□ 1.36
SNX11-209ENST00000581705 MCTP1Q6DN14 999 aa23.53■■□□□ 1.36
SNX11-209ENST00000581705 PPP1R18Q6NYC8 613 aa23.53■■□□□ 1.36
SNX11-209ENST00000581705 KCTD1Q719H9 257 aa23.53■■□□□ 1.36
SNX11-209ENST00000581705 CHST13Q8NET6 341 aa23.53■■□□□ 1.36
SNX11-209ENST00000581705 PHF20Q9BVI0 1012 aa23.53■■□□□ 1.36
SNX11-209ENST00000581705 FBXO40Q9UH90 709 aa23.53■■□□□ 1.36
SNX11-209ENST00000581705 PNMA6FA0A0J9YX94 578 aa23.52■■□□□ 1.36
SNX11-209ENST00000581705 GUCY1B3Q02153 619 aa23.52■■□□□ 1.36
SNX11-209ENST00000581705 TRAF1Q13077 416 aa23.52■■□□□ 1.36
SNX11-209ENST00000581705 LRRC41Q15345 812 aa23.52■■□□□ 1.36
SNX11-209ENST00000581705 CSPP1Q1MSJ5 1256 aa23.52■■□□□ 1.36
SNX11-209ENST00000581705 MAMDC4Q6UXC1 1216 aa23.52■■□□□ 1.36
SNX11-209ENST00000581705 FERMT3Q86UX7 667 aa23.52■■□□□ 1.36
SNX11-209ENST00000581705 ADGRF4Q8IZF3 695 aa23.52■■□□□ 1.36
SNX11-209ENST00000581705 UBA5Q9GZZ9 404 aa23.52■■□□□ 1.36
SNX11-209ENST00000581705 JMJD4Q9H9V9 463 aa23.52■■□□□ 1.36
SNX11-209ENST00000581705 ISY1Q9ULR0 285 aaKnown RBP23.52■■□□□ 1.36
SNX11-209ENST00000581705 CNPY2Q9Y2B0 182 aa23.52■■□□□ 1.36
SNX11-209ENST00000581705 SYNGAP1Q96PV0 1343 aa23.52■■□□□ 1.36
SNX11-209ENST00000581705 SMCHD1A6NHR9 2005 aa23.51■■□□□ 1.35
SNX11-209ENST00000581705 ZBTB5O15062 677 aa23.51■■□□□ 1.35
SNX11-209ENST00000581705 RARBP10826 455 aa23.51■■□□□ 1.35
SNX11-209ENST00000581705 FOSBP53539 338 aa23.51■■□□□ 1.35
SNX11-209ENST00000581705 ZNF467Q7Z7K2 595 aaPredicted RBP23.51■■□□□ 1.35
SNX11-209ENST00000581705 TEX2Q8IWB9 1127 aa23.51■■□□□ 1.35
SNX11-209ENST00000581705 ZNF396Q96N95 335 aaPredicted RBP23.51■■□□□ 1.35
SNX11-209ENST00000581705 VPS54Q9P1Q0 977 aa23.51■■□□□ 1.35
SNX11-209ENST00000581705 MYH15Q9Y2K3 1946 aa23.51■■□□□ 1.35
SNX11-209ENST00000581705 ESYT2A0FGR8 921 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 KRT85P78386 507 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 SYDE2Q5VT97 1194 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 TTBK2Q6IQ55 1244 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 ANKRD35Q8N283 1001 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 DAGLBQ8NCG7 672 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 PIGSQ96S52 555 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 XPNPEP3Q9NQH7 507 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 CFAP45Q9UL16 551 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 ZNF536O15090 1300 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 hCG_1642624A0A1W2PR95 340 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 SNAI1O95863 264 aaPredicted RBP23.5■■□□□ 1.35
SNX11-209ENST00000581705 MYCNP04198 464 aaPredicted RBP23.5■■□□□ 1.35
SNX11-209ENST00000581705 AKR1A1P14550 325 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 KRT2P35908 639 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 RTP1P59025 263 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 IKQ13123 557 aaPredicted RBP23.5■■□□□ 1.35
SNX11-209ENST00000581705 GNL2Q13823 731 aaKnown RBP23.5■■□□□ 1.35
SNX11-209ENST00000581705 SLC39A5Q6ZMH5 540 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 DIS3L2Q8IYB7 885 aaKnown RBP23.5■■□□□ 1.35
SNX11-209ENST00000581705 TMEM87AQ8NBN3 555 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 GJB4Q9NTQ9 266 aa23.5■■□□□ 1.35
SNX11-209ENST00000581705 STXBP3O00186 592 aa23.49■■□□□ 1.35
SNX11-209ENST00000581705 SOX1O00570 391 aaPredicted RBP23.49■■□□□ 1.35
SNX11-209ENST00000581705 ADCYAP1R1P41586 468 aa23.49■■□□□ 1.35
SNX11-209ENST00000581705 SNX17Q15036 470 aa23.49■■□□□ 1.35
SNX11-209ENST00000581705 WWC2Q6AWC2 1192 aa23.49■■□□□ 1.35
SNX11-209ENST00000581705 FGD4Q96M96 766 aa23.49■■□□□ 1.35
SNX11-209ENST00000581705 SCAND2PQ9GZW5 306 aaPredicted RBP23.49■■□□□ 1.35
SNX11-209ENST00000581705 TCHHQ07283 1943 aa23.48■■□□□ 1.35
SNX11-209ENST00000581705 GNA11P29992 359 aa23.48■■□□□ 1.35
SNX11-209ENST00000581705 NLRP5P59047 1200 aa23.48■■□□□ 1.35
SNX11-209ENST00000581705 HEATR3Q7Z4Q2 680 aa23.48■■□□□ 1.35
SNX11-209ENST00000581705 NOSTRINQ8IVI9 506 aa23.48■■□□□ 1.35
SNX11-209ENST00000581705 AGBL1Q96MI9 1066 aa23.48■■□□□ 1.35
SNX11-209ENST00000581705 UBE2OQ9C0C9 1292 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms