RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 KCNA10Q16322 511 aa20.19■□□□□ 0.82
ITGB4-205ENST00000579211 LRRC26Q2I0M4 334 aa20.19■□□□□ 0.82
ITGB4-205ENST00000579211 RUFY3Q7L099 469 aa20.19■□□□□ 0.82
ITGB4-205ENST00000579211 TLK2Q86UE8 772 aa20.19■□□□□ 0.82
ITGB4-205ENST00000579211 FCHSD1Q86WN1 690 aa20.19■□□□□ 0.82
ITGB4-205ENST00000579211 SMARCC2Q8TAQ2 1214 aa20.19■□□□□ 0.82
ITGB4-205ENST00000579211 PHF24Q9UPV7 400 aa20.19■□□□□ 0.82
ITGB4-205ENST00000579211 ATP11BQ9Y2G3 1177 aa20.19■□□□□ 0.82
ITGB4-205ENST00000579211 CCDC196A0A1B0GTZ2 297 aa20.18■□□□□ 0.82
ITGB4-205ENST00000579211 hCG_1642624A0A1W2PR95 340 aa20.18■□□□□ 0.82
ITGB4-205ENST00000579211 ADCY6O43306 1168 aa20.18■□□□□ 0.82
ITGB4-205ENST00000579211 ZEB2O60315 1214 aa20.18■□□□□ 0.82
ITGB4-205ENST00000579211 HSD17B4P51659 736 aa20.18■□□□□ 0.82
ITGB4-205ENST00000579211 PPP2R5BQ15173 497 aa20.18■□□□□ 0.82
ITGB4-205ENST00000579211 SLC39A5Q6ZMH5 540 aa20.18■□□□□ 0.82
ITGB4-205ENST00000579211 SCFD2Q8WU76 684 aa20.18■□□□□ 0.82
ITGB4-205ENST00000579211 COL20A1Q9P218 1284 aa20.18■□□□□ 0.82
ITGB4-205ENST00000579211 MOXD2PA6NHM9 499 aa20.17■□□□□ 0.82
ITGB4-205ENST00000579211 MYCLP12524 364 aaPredicted RBP20.17■□□□□ 0.82
ITGB4-205ENST00000579211 ACLYP53396 1101 aa20.17■□□□□ 0.82
ITGB4-205ENST00000579211 TTLL4Q14679 1199 aa20.17■□□□□ 0.82
ITGB4-205ENST00000579211 SEPT14Q6ZU15 432 aa20.17■□□□□ 0.82
ITGB4-205ENST00000579211 HEATR3Q7Z4Q2 680 aa20.17■□□□□ 0.82
ITGB4-205ENST00000579211 GLT1D1Q96MS3 346 aa20.17■□□□□ 0.82
ITGB4-205ENST00000579211 UPF3AQ9H1J1 476 aaKnown RBP20.17■□□□□ 0.82
ITGB4-205ENST00000579211 STARD7Q9NQZ5 370 aa20.17■□□□□ 0.82
ITGB4-205ENST00000579211 PXMP2Q9NR77 195 aa20.17■□□□□ 0.82
ITGB4-205ENST00000579211 PRKAG2Q9UGJ0 569 aa20.17■□□□□ 0.82
ITGB4-205ENST00000579211 Q9Y3F1 56 aa20.17■□□□□ 0.82
ITGB4-205ENST00000579211 A0A1W2PQ45 241 aaPredicted RBP20.16■□□□□ 0.82
ITGB4-205ENST00000579211 A0A1W2PQY0 241 aa20.16■□□□□ 0.82
ITGB4-205ENST00000579211 OPLAHO14841 1288 aa20.16■□□□□ 0.82
ITGB4-205ENST00000579211 NR3C2P08235 984 aa20.16■□□□□ 0.82
ITGB4-205ENST00000579211 TXNP10599 105 aaKnown RBP20.16■□□□□ 0.82
ITGB4-205ENST00000579211 EDNRBP24530 442 aa20.16■□□□□ 0.82
ITGB4-205ENST00000579211 RCAN1P53805 252 aa20.16■□□□□ 0.82
ITGB4-205ENST00000579211 RTP1P59025 263 aa20.16■□□□□ 0.82
ITGB4-205ENST00000579211 BEX3Q00994 111 aa20.16■□□□□ 0.82
ITGB4-205ENST00000579211 DUSP28Q4G0W2 176 aa20.16■□□□□ 0.82
ITGB4-205ENST00000579211 BRDTQ58F21 947 aaPredicted RBP20.16■□□□□ 0.82
ITGB4-205ENST00000579211 KLHDC9Q8NEP7 349 aa20.16■□□□□ 0.82
ITGB4-205ENST00000579211 ZSWIM6Q9HCJ5 1215 aa20.16■□□□□ 0.82
ITGB4-205ENST00000579211 ZMYND8Q9ULU4 1186 aaPredicted RBP20.16■□□□□ 0.82
ITGB4-205ENST00000579211 GNEQ9Y223 722 aaKnown RBP20.16■□□□□ 0.82
ITGB4-205ENST00000579211 MYADML2A6NDP7 307 aa20.15■□□□□ 0.82
ITGB4-205ENST00000579211 NKRFO15226 690 aaKnown RBP eCLIP20.15■□□□□ 0.82
ITGB4-205ENST00000579211 EIF3JO75822 258 aaKnown RBP20.15■□□□□ 0.82
ITGB4-205ENST00000579211 ASGR1P07306 291 aa20.15■□□□□ 0.82
ITGB4-205ENST00000579211 FSCN1Q16658 493 aaKnown RBP20.15■□□□□ 0.82
ITGB4-205ENST00000579211 OR6J1Q8NGC5 347 aa20.15■□□□□ 0.82
ITGB4-205ENST00000579211 TM6SF1Q9BZW5 370 aa20.15■□□□□ 0.82
ITGB4-205ENST00000579211 PSTPIP2Q9H939 334 aa20.15■□□□□ 0.82
ITGB4-205ENST00000579211 V9GY48 417 aaPredicted RBP20.15■□□□□ 0.82
ITGB4-205ENST00000579211 DOCK5Q9H7D0 1870 aa20.15■□□□□ 0.82
ITGB4-205ENST00000579211 RBM47A0AV96 593 aaKnown RBP20.14■□□□□ 0.81
ITGB4-205ENST00000579211 SYN1P17600 705 aa20.14■□□□□ 0.81
ITGB4-205ENST00000579211 CST5P28325 142 aaPredicted RBP20.14■□□□□ 0.81
ITGB4-205ENST00000579211 IRX5P78411 483 aaPredicted RBP20.14■□□□□ 0.81
ITGB4-205ENST00000579211 AKAP17AQ02040 695 aaKnown RBP20.14■□□□□ 0.81
ITGB4-205ENST00000579211 GHRHRQ02643 423 aa20.14■□□□□ 0.81
ITGB4-205ENST00000579211 FBXL16Q8N461 479 aa20.14■□□□□ 0.81
ITGB4-205ENST00000579211 GPKOWQ92917 476 aaPredicted RBP eCLIP20.14■□□□□ 0.81
ITGB4-205ENST00000579211 UPF3BQ9BZI7 483 aaKnown RBP20.14■□□□□ 0.81
ITGB4-205ENST00000579211 PDRG1Q9NUG6 133 aa20.14■□□□□ 0.81
ITGB4-205ENST00000579211 CNTNAP5Q8WYK1 1306 aa20.13■□□□□ 0.81
ITGB4-205ENST00000579211 CDC27P30260 824 aa20.13■□□□□ 0.81
ITGB4-205ENST00000579211 CCND2P30279 289 aa20.13■□□□□ 0.81
ITGB4-205ENST00000579211 ADD1P35611 737 aaKnown RBP20.13■□□□□ 0.81
ITGB4-205ENST00000579211 CPT1AP50416 773 aa20.13■□□□□ 0.81
ITGB4-205ENST00000579211 NAPAP54920 295 aa20.13■□□□□ 0.81
ITGB4-205ENST00000579211 PGM5Q15124 567 aa20.13■□□□□ 0.81
ITGB4-205ENST00000579211 TMEM63BQ5T3F8 832 aa20.13■□□□□ 0.81
ITGB4-205ENST00000579211 USP17L6PQ6QN14 398 aa20.13■□□□□ 0.81
ITGB4-205ENST00000579211 PDCD2LQ9BRP1 358 aa20.13■□□□□ 0.81
ITGB4-205ENST00000579211 PRDM5Q9NQX1 630 aaPredicted RBP20.13■□□□□ 0.81
ITGB4-205ENST00000579211 CCT2P78371 535 aaKnown RBP20.12■□□□□ 0.81
ITGB4-205ENST00000579211 TRIM60Q495X7 471 aa20.12■□□□□ 0.81
ITGB4-205ENST00000579211 CHRDL2Q6WN34 429 aa20.12■□□□□ 0.81
ITGB4-205ENST00000579211 MRVI1Q9Y6F6 885 aa20.12■□□□□ 0.81
ITGB4-205ENST00000579211 ELP1O95163 1332 aa20.11■□□□□ 0.81
ITGB4-205ENST00000579211 SPDYE3A6NKU9 549 aa20.11■□□□□ 0.81
ITGB4-205ENST00000579211 PQBP1O60828 265 aaKnown RBP20.11■□□□□ 0.81
ITGB4-205ENST00000579211 CABYRO75952 493 aa20.11■□□□□ 0.81
ITGB4-205ENST00000579211 MYL3P08590 195 aa20.11■□□□□ 0.81
ITGB4-205ENST00000579211 PTGS1P23219 599 aa20.11■□□□□ 0.81
ITGB4-205ENST00000579211 ANAPC15P60006 121 aa20.11■□□□□ 0.81
ITGB4-205ENST00000579211 CCSAPQ6IQ19 270 aaPredicted RBP20.11■□□□□ 0.81
ITGB4-205ENST00000579211 AGXT2Q9BYV1 514 aa20.11■□□□□ 0.81
ITGB4-205ENST00000579211 POLR3EQ9NVU0 708 aa20.11■□□□□ 0.81
ITGB4-205ENST00000579211 A0A0U1RQG5 324 aaPredicted RBP20.1■□□□□ 0.81
ITGB4-205ENST00000579211 DCDC2CA8MYV0 355 aa20.1■□□□□ 0.81
ITGB4-205ENST00000579211 hCG_1984214I3L0E3 225 aa20.1■□□□□ 0.81
ITGB4-205ENST00000579211 GH1P01241 217 aa20.1■□□□□ 0.81
ITGB4-205ENST00000579211 LY6KQ17RY6 165 aa20.1■□□□□ 0.81
ITGB4-205ENST00000579211 C1orf53Q5VUE5 145 aa20.1■□□□□ 0.81
ITGB4-205ENST00000579211 KCNV1Q6PIU1 500 aa20.1■□□□□ 0.81
ITGB4-205ENST00000579211 CXCL17Q6UXB2 119 aa20.1■□□□□ 0.81
ITGB4-205ENST00000579211 VSIG10LQ86VR7 867 aa20.1■□□□□ 0.81
ITGB4-205ENST00000579211 ZNF713Q8N859 430 aaPredicted RBP20.1■□□□□ 0.81
ITGB4-205ENST00000579211 COPS5Q92905 334 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms