RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 NAP1L4Q99733 375 aaKnown RBP18.39■□□□□ 0.53
SS18-211ENST00000578954 CFHR5Q9BXR6 569 aa18.39■□□□□ 0.53
SS18-211ENST00000578954 PORCNQ9H237 461 aa18.39■□□□□ 0.53
SS18-211ENST00000578954 CYP3A7-CYP3A51PA0A087WV96 503 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 FIBPO43427 364 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 GCFC2P16383 781 aaKnown RBP18.38■□□□□ 0.53
SS18-211ENST00000578954 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
SS18-211ENST00000578954 CYP3A7P24462 503 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 MCM4P33991 863 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 VEGFBP49765 207 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 ARHGAP4P98171 946 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 GRM1Q13255 1194 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 NBR1Q14596 966 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 SLC39A14Q15043 492 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 CSPP1Q1MSJ5 1256 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 PPP4R3AQ6IN85 833 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 FCHSD1Q86WN1 690 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 R3HDMLQ9H3Y0 253 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 CEP131Q9UPN4 1083 aa18.38■□□□□ 0.53
SS18-211ENST00000578954 DNAJC25-GNG10A0A024R161 153 aa18.37■□□□□ 0.53
SS18-211ENST00000578954 CRHR2Q13324 411 aa18.37■□□□□ 0.53
SS18-211ENST00000578954 ABRAQ8N0Z2 381 aa18.37■□□□□ 0.53
SS18-211ENST00000578954 KCNG4Q8TDN1 519 aa18.37■□□□□ 0.53
SS18-211ENST00000578954 SPATA32Q96LK8 384 aa18.37■□□□□ 0.53
SS18-211ENST00000578954 TAAR1Q96RJ0 339 aa18.37■□□□□ 0.53
SS18-211ENST00000578954 EFCC1Q9HA90 598 aa18.37■□□□□ 0.53
SS18-211ENST00000578954 CPA4Q9UI42 421 aa18.37■□□□□ 0.53
SS18-211ENST00000578954 ZNF236Q9UL36 1845 aa18.37■□□□□ 0.53
SS18-211ENST00000578954 GOLGA6L22H0YM25 854 aa18.36■□□□□ 0.53
SS18-211ENST00000578954 PPP6R2O75170 966 aa18.36■□□□□ 0.53
SS18-211ENST00000578954 MAPK4P31152 587 aa18.36■□□□□ 0.53
SS18-211ENST00000578954 ATP2C1P98194 919 aaPredicted RBP18.36■□□□□ 0.53
SS18-211ENST00000578954 STK38Q15208 465 aa18.36■□□□□ 0.53
SS18-211ENST00000578954 LETM2Q2VYF4 491 aa18.36■□□□□ 0.53
SS18-211ENST00000578954 ANKRD35Q8N283 1001 aa18.36■□□□□ 0.53
SS18-211ENST00000578954 C4orf32Q8N8J7 132 aa18.36■□□□□ 0.53
SS18-211ENST00000578954 FAM133AQ8N9E0 248 aa18.36■□□□□ 0.53
SS18-211ENST00000578954 DNERQ8NFT8 737 aa18.36■□□□□ 0.53
SS18-211ENST00000578954 GDPD2Q9HCC8 539 aa18.36■□□□□ 0.53
SS18-211ENST00000578954 PXMP2Q9NR77 195 aa18.36■□□□□ 0.53
SS18-211ENST00000578954 DDX11L8A8MPP1 907 aa18.35■□□□□ 0.53
SS18-211ENST00000578954 SPTLC2O15270 562 aa18.35■□□□□ 0.53
SS18-211ENST00000578954 STRNO43815 780 aa18.35■□□□□ 0.53
SS18-211ENST00000578954 TDP2O95551 362 aa18.35■□□□□ 0.53
SS18-211ENST00000578954 ATP2B1P20020 1258 aa18.35■□□□□ 0.53
SS18-211ENST00000578954 HTRA3P83110 453 aa18.35■□□□□ 0.53
SS18-211ENST00000578954 CEBPZQ03701 1054 aaKnown RBP18.35■□□□□ 0.53
SS18-211ENST00000578954 KCTD2Q14681 263 aa18.35■□□□□ 0.53
SS18-211ENST00000578954 ZNF174Q15697 407 aa18.35■□□□□ 0.53
SS18-211ENST00000578954 XRRA1Q6P2D8 792 aa18.35■□□□□ 0.53
SS18-211ENST00000578954 RMDN3Q96TC7 470 aa18.35■□□□□ 0.53
SS18-211ENST00000578954 MMP19Q99542 508 aa18.35■□□□□ 0.53
SS18-211ENST00000578954 PDCD2LQ9BRP1 358 aa18.35■□□□□ 0.53
SS18-211ENST00000578954 LOC102724159A0A0B4J2E5 919 aa18.34■□□□□ 0.53
SS18-211ENST00000578954 LAD1O00515 517 aa18.34■□□□□ 0.53
SS18-211ENST00000578954 CCNT1O60563 726 aaKnown RBP18.34■□□□□ 0.53
SS18-211ENST00000578954 FCER1AP12319 257 aa18.34■□□□□ 0.53
SS18-211ENST00000578954 HSPA6P17066 643 aa18.34■□□□□ 0.53
SS18-211ENST00000578954 MCM7P33993 719 aa18.34■□□□□ 0.53
SS18-211ENST00000578954 PGM5Q15124 567 aa18.34■□□□□ 0.53
SS18-211ENST00000578954 PWP2Q15269 919 aaKnown RBP18.34■□□□□ 0.53
SS18-211ENST00000578954 NFKBIBQ15653 356 aa18.34■□□□□ 0.53
SS18-211ENST00000578954 Q4G0T1 1027 aa18.34■□□□□ 0.53
SS18-211ENST00000578954 PCNX4Q63HM2 1172 aa18.34■□□□□ 0.53
SS18-211ENST00000578954 ARL6IP4Q66PJ3 421 aaKnown RBP18.34■□□□□ 0.53
SS18-211ENST00000578954 NSUN6Q8TEA1 469 aaKnown RBP18.34■□□□□ 0.53
SS18-211ENST00000578954 LMBRD1Q9NUN5 540 aa18.34■□□□□ 0.53
SS18-211ENST00000578954 PLXNB2O15031 1838 aa18.34■□□□□ 0.53
SS18-211ENST00000578954 ASTN1O14525 1302 aa18.33■□□□□ 0.53
SS18-211ENST00000578954 IGLV3-22A0A075B6J6 115 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 POTEB2H3BUK9 544 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 NEMFO60524 1076 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 PTPREP23469 700 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 PRPHP41219 470 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 PTGDRQ13258 359 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 GRB14Q14449 540 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 GPR142Q7Z601 462 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 JMYQ8N9B5 988 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 IL31RAQ8NI17 732 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 LENG9Q96B70 501 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 FGD4Q96M96 766 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 PURBQ96QR8 312 aaKnown RBP18.33■□□□□ 0.52
SS18-211ENST00000578954 IWS1Q96ST2 819 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 TMEM60Q9H2L4 133 aa18.33■□□□□ 0.52
SS18-211ENST00000578954 ADD3Q9UEY8 706 aaKnown RBP18.33■□□□□ 0.52
SS18-211ENST00000578954 SOWAHBA6NEL2 793 aa18.32■□□□□ 0.52
SS18-211ENST00000578954 FAM86B1E9PN63 330 aa18.32■□□□□ 0.52
SS18-211ENST00000578954 SLC37A4O43826 429 aa18.32■□□□□ 0.52
SS18-211ENST00000578954 FAM86B2P0C5J1 330 aa18.32■□□□□ 0.52
SS18-211ENST00000578954 PTMSP20962 102 aa18.32■□□□□ 0.52
SS18-211ENST00000578954 EDNRBP24530 442 aa18.32■□□□□ 0.52
SS18-211ENST00000578954 ALDH5A1P51649 535 aaPredicted RBP18.32■□□□□ 0.52
SS18-211ENST00000578954 C1QTNF8P60827 252 aa18.32■□□□□ 0.52
SS18-211ENST00000578954 ARHGEF16Q5VV41 709 aa18.32■□□□□ 0.52
SS18-211ENST00000578954 NIPA1Q7RTP0 329 aa18.32■□□□□ 0.52
SS18-211ENST00000578954 PLEKHH3Q7Z736 793 aa18.32■□□□□ 0.52
SS18-211ENST00000578954 MTMR9Q96QG7 549 aa18.32■□□□□ 0.52
SS18-211ENST00000578954 DDX25Q9UHL0 483 aaKnown RBP18.32■□□□□ 0.52
SS18-211ENST00000578954 FBXO2Q9UK22 296 aaPredicted RBP18.32■□□□□ 0.52
SS18-211ENST00000578954 UBIAD1Q9Y5Z9 338 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms