RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 GHRHRQ02643 423 aa13.88□□□□□ -0.19
IFT20-207ENST00000578547 PIK3AP1Q6ZUJ8 805 aa13.88□□□□□ -0.19
IFT20-207ENST00000578547 SAMD3Q8N6K7 520 aa13.88□□□□□ -0.19
IFT20-207ENST00000578547 SOCS4Q8WXH5 440 aa13.88□□□□□ -0.19
IFT20-207ENST00000578547 TAAR1Q96RJ0 339 aa13.88□□□□□ -0.19
IFT20-207ENST00000578547 RMDN3Q96TC7 470 aa13.88□□□□□ -0.19
IFT20-207ENST00000578547 ANO3Q9BYT9 981 aa13.88□□□□□ -0.19
IFT20-207ENST00000578547 EHMT1Q9H9B1 1298 aa13.88□□□□□ -0.19
IFT20-207ENST00000578547 MAP3K20Q9NYL2 800 aaKnown RBP13.88□□□□□ -0.19
IFT20-207ENST00000578547 DNAJC25-GNG10A0A024R161 153 aa13.87□□□□□ -0.19
IFT20-207ENST00000578547 FAM205CA6NFA0 338 aa13.87□□□□□ -0.19
IFT20-207ENST00000578547 FOSP01100 380 aaPredicted RBP13.87□□□□□ -0.19
IFT20-207ENST00000578547 RGS2P41220 211 aa13.87□□□□□ -0.19
IFT20-207ENST00000578547 AP3B2Q13367 1082 aa13.87□□□□□ -0.19
IFT20-207ENST00000578547 NONOQ15233 471 aaKnown RBP eCLIP13.87□□□□□ -0.19
IFT20-207ENST00000578547 ZNF792Q3KQV3 632 aa13.87□□□□□ -0.19
IFT20-207ENST00000578547 ARHGEF16Q5VV41 709 aa13.87□□□□□ -0.19
IFT20-207ENST00000578547 KRT25Q7Z3Z0 450 aa13.87□□□□□ -0.19
IFT20-207ENST00000578547 CTU1Q7Z7A3 348 aaKnown RBP13.87□□□□□ -0.19
IFT20-207ENST00000578547 NOSTRINQ8IVI9 506 aa13.87□□□□□ -0.19
IFT20-207ENST00000578547 FAM133AQ8N9E0 248 aa13.87□□□□□ -0.19
IFT20-207ENST00000578547 NPLOC4Q8TAT6 608 aa13.87□□□□□ -0.19
IFT20-207ENST00000578547 MAF1Q9H063 256 aa13.87□□□□□ -0.19
IFT20-207ENST00000578547 FOXP1Q9H334 677 aaPredicted RBP13.87□□□□□ -0.19
IFT20-207ENST00000578547 PXMP2Q9NR77 195 aa13.87□□□□□ -0.19
IFT20-207ENST00000578547 SOWAHBA6NEL2 793 aa13.86□□□□□ -0.19
IFT20-207ENST00000578547 M0R2N6 131 aa13.86□□□□□ -0.19
IFT20-207ENST00000578547 HOXC6P09630 235 aa13.86□□□□□ -0.19
IFT20-207ENST00000578547 ZSCAN22P10073 491 aaPredicted RBP13.86□□□□□ -0.19
IFT20-207ENST00000578547 ALDH5A1P51649 535 aaPredicted RBP13.86□□□□□ -0.19
IFT20-207ENST00000578547 PRMT2P55345 433 aa13.86□□□□□ -0.19
IFT20-207ENST00000578547 EARS2Q5JPH6 523 aaKnown RBP13.86□□□□□ -0.19
IFT20-207ENST00000578547 MCTP2Q6DN12 878 aa13.86□□□□□ -0.19
IFT20-207ENST00000578547 TEX2Q8IWB9 1127 aa13.86□□□□□ -0.19
IFT20-207ENST00000578547 TNFRSF25Q93038 417 aa13.86□□□□□ -0.19
IFT20-207ENST00000578547 APBA2Q99767 749 aa13.86□□□□□ -0.19
IFT20-207ENST00000578547 SLC5A4Q9NY91 659 aa13.86□□□□□ -0.19
IFT20-207ENST00000578547 ADD3Q9UEY8 706 aaKnown RBP13.86□□□□□ -0.19
IFT20-207ENST00000578547 PTPN22Q9Y2R2 807 aa13.86□□□□□ -0.19
IFT20-207ENST00000578547 PTCH2Q9Y6C5 1203 aa13.86□□□□□ -0.19
IFT20-207ENST00000578547 DDX49Q9Y6V7 483 aaKnown RBP13.86□□□□□ -0.19
IFT20-207ENST00000578547 PLXNA1Q9UIW2 1896 aa13.86□□□□□ -0.19
IFT20-207ENST00000578547 ASTN1O14525 1302 aa13.86□□□□□ -0.19
IFT20-207ENST00000578547 MYCLP12524 364 aaPredicted RBP13.85□□□□□ -0.19
IFT20-207ENST00000578547 XRCC5P13010 732 aaKnown RBP13.85□□□□□ -0.19
IFT20-207ENST00000578547 DDIT3P35638 169 aa13.85□□□□□ -0.19
IFT20-207ENST00000578547 IRF5Q13568 498 aa13.85□□□□□ -0.19
IFT20-207ENST00000578547 CCL14Q16627 93 aa13.85□□□□□ -0.19
IFT20-207ENST00000578547 INF2Q27J81 1249 aa13.85□□□□□ -0.19
IFT20-207ENST00000578547 IL31RAQ8NI17 732 aa13.85□□□□□ -0.19
IFT20-207ENST00000578547 RAET1EQ8TD07 263 aa13.85□□□□□ -0.19
IFT20-207ENST00000578547 NSUN6Q8TEA1 469 aaKnown RBP13.85□□□□□ -0.19
IFT20-207ENST00000578547 TBCKQ8TEA7 893 aa13.85□□□□□ -0.19
IFT20-207ENST00000578547 ZFP91Q96JP5 570 aaPredicted RBP13.85□□□□□ -0.19
IFT20-207ENST00000578547 FGD4Q96M96 766 aa13.85□□□□□ -0.19
IFT20-207ENST00000578547 FLRT1Q9NZU1 646 aa13.85□□□□□ -0.19
IFT20-207ENST00000578547 ZNFX1Q9P2E3 1918 aaKnown RBP13.85□□□□□ -0.19
IFT20-207ENST00000578547 RPTORQ8N122 1335 aa13.85□□□□□ -0.19
IFT20-207ENST00000578547 ADCY3O60266 1144 aa13.84□□□□□ -0.19
IFT20-207ENST00000578547 PDIA4P13667 645 aaKnown RBP13.84□□□□□ -0.19
IFT20-207ENST00000578547 ELNP15502 786 aa13.84□□□□□ -0.19
IFT20-207ENST00000578547 ATP2B1P20020 1258 aa13.84□□□□□ -0.19
IFT20-207ENST00000578547 U2AF2P26368 475 aaKnown RBP eCLIP13.84□□□□□ -0.19
IFT20-207ENST00000578547 ARHGAP4P98171 946 aa13.84□□□□□ -0.19
IFT20-207ENST00000578547 PDE4DQ08499 809 aa13.84□□□□□ -0.19
IFT20-207ENST00000578547 RESTQ13127 1097 aa13.84□□□□□ -0.19
IFT20-207ENST00000578547 PGM5Q15124 567 aa13.84□□□□□ -0.19
IFT20-207ENST00000578547 DNERQ8NFT8 737 aa13.84□□□□□ -0.19
IFT20-207ENST00000578547 MAML3Q96JK9 1138 aa13.84□□□□□ -0.19
IFT20-207ENST00000578547 MPHOSPH6Q99547 160 aaKnown RBP13.84□□□□□ -0.19
IFT20-207ENST00000578547 PDCD2LQ9BRP1 358 aa13.84□□□□□ -0.19
IFT20-207ENST00000578547 DIS3Q9Y2L1 958 aaKnown RBP13.84□□□□□ -0.19
IFT20-207ENST00000578547 FRMPD4Q14CM0 1322 aa13.84□□□□□ -0.19
IFT20-207ENST00000578547 BRD1O95696 1058 aa13.83□□□□□ -0.2
IFT20-207ENST00000578547 F13A1P00488 732 aa13.83□□□□□ -0.2
IFT20-207ENST00000578547 IGHA2P01877 340 aa13.83□□□□□ -0.2
IFT20-207ENST00000578547 CCND2P30279 289 aa13.83□□□□□ -0.2
IFT20-207ENST00000578547 SREBF1P36956 1147 aa13.83□□□□□ -0.2
IFT20-207ENST00000578547 LETM2Q2VYF4 491 aa13.83□□□□□ -0.2
IFT20-207ENST00000578547 FOXD4L6Q3SYB3 417 aaPredicted RBP13.83□□□□□ -0.2
IFT20-207ENST00000578547 FAM173BQ6P4H8 233 aa13.83□□□□□ -0.2
IFT20-207ENST00000578547 FOXD4L3Q6VB84 417 aaPredicted RBP13.83□□□□□ -0.2
IFT20-207ENST00000578547 BRAPQ7Z569 592 aa13.83□□□□□ -0.2
IFT20-207ENST00000578547 TRIB2Q92519 343 aa13.83□□□□□ -0.2
IFT20-207ENST00000578547 NOL7Q9UMY1 257 aaKnown RBP13.83□□□□□ -0.2
IFT20-207ENST00000578547 ZDHHC9Q9Y397 364 aa13.83□□□□□ -0.2
IFT20-207ENST00000578547 LRRC37A2A6NM11 1700 aa13.83□□□□□ -0.2
IFT20-207ENST00000578547 ASB14A6NK59 587 aa13.82□□□□□ -0.2
IFT20-207ENST00000578547 B4DLN1 442 aa13.82□□□□□ -0.2
IFT20-207ENST00000578547 NR3C2P08235 984 aa13.82□□□□□ -0.2
IFT20-207ENST00000578547 ZNF76P36508 570 aa13.82□□□□□ -0.2
IFT20-207ENST00000578547 NUCB2P80303 420 aa13.82□□□□□ -0.2
IFT20-207ENST00000578547 PKN2Q16513 984 aaKnown RBP13.82□□□□□ -0.2
IFT20-207ENST00000578547 PCNX4Q63HM2 1172 aa13.82□□□□□ -0.2
IFT20-207ENST00000578547 FBXO46Q6PJ61 603 aaPredicted RBP13.82□□□□□ -0.2
IFT20-207ENST00000578547 ARMCX2Q7L311 632 aa13.82□□□□□ -0.2
IFT20-207ENST00000578547 EEPD1Q7L9B9 569 aa13.82□□□□□ -0.2
IFT20-207ENST00000578547 ZNF467Q7Z7K2 595 aaPredicted RBP13.82□□□□□ -0.2
IFT20-207ENST00000578547 NEK8Q86SG6 692 aa13.82□□□□□ -0.2
IFT20-207ENST00000578547 PXYLP1Q8TE99 480 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms