RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 PXMP2Q9NR77 195 aa26.67■■□□□ 1.86
LIMD2-204ENST00000578297 PDRG1Q9NUG6 133 aa26.67■■□□□ 1.86
LIMD2-204ENST00000578297 GNEQ9Y223 722 aaKnown RBP26.67■■□□□ 1.86
LIMD2-204ENST00000578297 MYCNP04198 464 aaPredicted RBP26.66■■□□□ 1.86
LIMD2-204ENST00000578297 PDIA3P30101 505 aaKnown RBP26.66■■□□□ 1.86
LIMD2-204ENST00000578297 GJA9P57773 515 aa26.66■■□□□ 1.86
LIMD2-204ENST00000578297 KLHDC9Q8NEP7 349 aa26.66■■□□□ 1.86
LIMD2-204ENST00000578297 SENP6Q9GZR1 1112 aaPredicted RBP26.66■■□□□ 1.86
LIMD2-204ENST00000578297 UPF3AQ9H1J1 476 aaKnown RBP26.66■■□□□ 1.86
LIMD2-204ENST00000578297 SMPD1P17405 629 aa26.65■■□□□ 1.86
LIMD2-204ENST00000578297 NKX3-2P78367 333 aa26.65■■□□□ 1.86
LIMD2-204ENST00000578297 STXBP2Q15833 593 aa26.65■■□□□ 1.86
LIMD2-204ENST00000578297 SPC25Q9HBM1 224 aa26.65■■□□□ 1.86
LIMD2-204ENST00000578297 Q9Y3F1 56 aa26.65■■□□□ 1.86
LIMD2-204ENST00000578297 V9GY48 417 aaPredicted RBP26.65■■□□□ 1.86
LIMD2-204ENST00000578297 PIK3CDO00329 1044 aa26.64■■□□□ 1.86
LIMD2-204ENST00000578297 EIF2AK2P19525 551 aaKnown RBP26.64■■□□□ 1.86
LIMD2-204ENST00000578297 CST5P28325 142 aaPredicted RBP26.64■■□□□ 1.86
LIMD2-204ENST00000578297 NOL8Q76FK4 1167 aaKnown RBP26.64■■□□□ 1.86
LIMD2-204ENST00000578297 ZNF274Q96GC6 653 aaPredicted RBP26.64■■□□□ 1.86
LIMD2-204ENST00000578297 TSEN34Q9BSV6 310 aaKnown RBP26.64■■□□□ 1.86
LIMD2-204ENST00000578297 WDR11Q9BZH6 1224 aa26.64■■□□□ 1.86
LIMD2-204ENST00000578297 ALDH8A1Q9H2A2 487 aaPredicted RBP26.64■■□□□ 1.86
LIMD2-204ENST00000578297 PHF24Q9UPV7 400 aa26.64■■□□□ 1.86
LIMD2-204ENST00000578297 NR3C2P08235 984 aa26.63■■□□□ 1.85
LIMD2-204ENST00000578297 DUSP28Q4G0W2 176 aa26.63■■□□□ 1.85
LIMD2-204ENST00000578297 CCSAPQ6IQ19 270 aaPredicted RBP26.63■■□□□ 1.85
LIMD2-204ENST00000578297 HEATR3Q7Z4Q2 680 aa26.63■■□□□ 1.85
LIMD2-204ENST00000578297 FCHSD1Q86WN1 690 aa26.63■■□□□ 1.85
LIMD2-204ENST00000578297 PDCD2LQ9BRP1 358 aa26.63■■□□□ 1.85
LIMD2-204ENST00000578297 hCG_1984214I3L0E3 225 aa26.62■■□□□ 1.85
LIMD2-204ENST00000578297 MEIS2O14770 477 aa26.62■■□□□ 1.85
LIMD2-204ENST00000578297 EVI5O60447 810 aa26.62■■□□□ 1.85
LIMD2-204ENST00000578297 C6orf222P0C671 652 aaPredicted RBP26.62■■□□□ 1.85
LIMD2-204ENST00000578297 TLK2Q86UE8 772 aa26.62■■□□□ 1.85
LIMD2-204ENST00000578297 ZNF713Q8N859 430 aaPredicted RBP26.62■■□□□ 1.85
LIMD2-204ENST00000578297 SCFD2Q8WU76 684 aa26.62■■□□□ 1.85
LIMD2-204ENST00000578297 GPKOWQ92917 476 aaPredicted RBP eCLIP26.62■■□□□ 1.85
LIMD2-204ENST00000578297 CUL5Q93034 780 aa26.62■■□□□ 1.85
LIMD2-204ENST00000578297 PSTPIP2Q9H939 334 aa26.62■■□□□ 1.85
LIMD2-204ENST00000578297 DNAH12Q6ZR08 3092 aa26.62■■□□□ 1.85
LIMD2-204ENST00000578297 ALPK3Q96L96 1907 aa26.62■■□□□ 1.85
LIMD2-204ENST00000578297 MYADML2A6NDP7 307 aa26.61■■□□□ 1.85
LIMD2-204ENST00000578297 EIF3JO75822 258 aaKnown RBP26.61■■□□□ 1.85
LIMD2-204ENST00000578297 CCT2P78371 535 aaKnown RBP26.61■■□□□ 1.85
LIMD2-204ENST00000578297 PGM5Q15124 567 aa26.61■■□□□ 1.85
LIMD2-204ENST00000578297 TMEM63BQ5T3F8 832 aa26.61■■□□□ 1.85
LIMD2-204ENST00000578297 PRPF38BQ5VTL8 546 aaKnown RBP26.61■■□□□ 1.85
LIMD2-204ENST00000578297 WWC2Q6AWC2 1192 aa26.61■■□□□ 1.85
LIMD2-204ENST00000578297 SMARCC2Q8TAQ2 1214 aa26.61■■□□□ 1.85
LIMD2-204ENST00000578297 AP5M1Q9H0R1 490 aa26.61■■□□□ 1.85
LIMD2-204ENST00000578297 MOXD2PA6NHM9 499 aa26.6■■□□□ 1.85
LIMD2-204ENST00000578297 CTAGE5O15320 804 aa26.6■■□□□ 1.85
LIMD2-204ENST00000578297 DYNC1LI2O43237 492 aaPredicted RBP26.6■■□□□ 1.85
LIMD2-204ENST00000578297 IRX5P78411 483 aaPredicted RBP26.6■■□□□ 1.85
LIMD2-204ENST00000578297 NTRK3Q16288 839 aa26.6■■□□□ 1.85
LIMD2-204ENST00000578297 KCNA10Q16322 511 aa26.6■■□□□ 1.85
LIMD2-204ENST00000578297 LRRC26Q2I0M4 334 aa26.6■■□□□ 1.85
LIMD2-204ENST00000578297 USP17L6PQ6QN14 398 aa26.6■■□□□ 1.85
LIMD2-204ENST00000578297 PCSK9Q8NBP7 692 aaKnown RBP26.6■■□□□ 1.85
LIMD2-204ENST00000578297 RBM27Q9P2N5 1060 aaKnown RBP26.6■■□□□ 1.85
LIMD2-204ENST00000578297 NR2E3Q9Y5X4 410 aa26.6■■□□□ 1.85
LIMD2-204ENST00000578297 FRMPD4Q14CM0 1322 aa26.6■■□□□ 1.85
LIMD2-204ENST00000578297 NKRFO15226 690 aaKnown RBP eCLIP26.59■■□□□ 1.85
LIMD2-204ENST00000578297 PRPF3O43395 683 aaKnown RBP26.59■■□□□ 1.85
LIMD2-204ENST00000578297 IFNAR1P17181 557 aa26.59■■□□□ 1.85
LIMD2-204ENST00000578297 ACLYP53396 1101 aa26.59■■□□□ 1.85
LIMD2-204ENST00000578297 TTLL4Q14679 1199 aa26.59■■□□□ 1.85
LIMD2-204ENST00000578297 PFKFB3Q16875 520 aaPredicted RBP26.59■■□□□ 1.85
LIMD2-204ENST00000578297 GNASQ5JWF2 1037 aa26.59■■□□□ 1.85
LIMD2-204ENST00000578297 PPP1R18Q6NYC8 613 aa26.59■■□□□ 1.85
LIMD2-204ENST00000578297 SLC39A5Q6ZMH5 540 aa26.59■■□□□ 1.85
LIMD2-204ENST00000578297 VSIG10LQ86VR7 867 aa26.59■■□□□ 1.85
LIMD2-204ENST00000578297 FERMT2Q96AC1 680 aa26.59■■□□□ 1.85
LIMD2-204ENST00000578297 LARP6Q9BRS8 491 aaKnown RBP26.59■■□□□ 1.85
LIMD2-204ENST00000578297 BARHL2Q9NY43 387 aa26.59■■□□□ 1.85
LIMD2-204ENST00000578297 STXBP3O00186 592 aa26.58■■□□□ 1.85
LIMD2-204ENST00000578297 MYCLP12524 364 aaPredicted RBP26.58■■□□□ 1.85
LIMD2-204ENST00000578297 PTGS1P23219 599 aa26.58■■□□□ 1.85
LIMD2-204ENST00000578297 NAPAP54920 295 aa26.58■■□□□ 1.85
LIMD2-204ENST00000578297 ANKRD1Q15327 319 aa26.58■■□□□ 1.85
LIMD2-204ENST00000578297 TEX2Q8IWB9 1127 aa26.58■■□□□ 1.85
LIMD2-204ENST00000578297 NCOA5Q9HCD5 579 aaKnown RBP26.58■■□□□ 1.85
LIMD2-204ENST00000578297 KIAA1217Q5T5P2 1943 aa26.57■■□□□ 1.84
LIMD2-204ENST00000578297 A0A1W2PQ45 241 aaPredicted RBP26.57■■□□□ 1.84
LIMD2-204ENST00000578297 A0A1W2PQY0 241 aa26.57■■□□□ 1.84
LIMD2-204ENST00000578297 TXNP10599 105 aaKnown RBP26.57■■□□□ 1.84
LIMD2-204ENST00000578297 CCND2P30279 289 aa26.57■■□□□ 1.84
LIMD2-204ENST00000578297 ATN1P54259 1190 aaPredicted RBP26.57■■□□□ 1.84
LIMD2-204ENST00000578297 FSCN1Q16658 493 aaKnown RBP26.57■■□□□ 1.84
LIMD2-204ENST00000578297 C1orf53Q5VUE5 145 aa26.57■■□□□ 1.84
LIMD2-204ENST00000578297 TYW1BQ6NUM6 668 aa26.57■■□□□ 1.84
LIMD2-204ENST00000578297 CCDC62Q6P9F0 684 aa26.57■■□□□ 1.84
LIMD2-204ENST00000578297 SEPT14Q6ZU15 432 aa26.57■■□□□ 1.84
LIMD2-204ENST00000578297 IL31RAQ8NI17 732 aa26.57■■□□□ 1.84
LIMD2-204ENST00000578297 RNF26Q9BY78 433 aaPredicted RBP26.57■■□□□ 1.84
LIMD2-204ENST00000578297 ARIH2O95376 493 aa26.56■■□□□ 1.84
LIMD2-204ENST00000578297 ASGR1P07306 291 aa26.56■■□□□ 1.84
LIMD2-204ENST00000578297 SCG2P13521 617 aa26.56■■□□□ 1.84
LIMD2-204ENST00000578297 BEX3Q00994 111 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms