RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 FEM1BQ9UK73 627 aa31.12■■■□□ 2.57
LIMD2-203ENST00000578067 PCDHA12Q9UN75 941 aa31.12■■■□□ 2.57
LIMD2-203ENST00000578067 RHOBTB3O94955 611 aa31.12■■■□□ 2.57
LIMD2-203ENST00000578067 TAL1P17542 331 aaPredicted RBP31.12■■■□□ 2.57
LIMD2-203ENST00000578067 KIF4BQ2VIQ3 1234 aa31.12■■■□□ 2.57
LIMD2-203ENST00000578067 CCDC84Q86UT8 332 aaPredicted RBP31.12■■■□□ 2.57
LIMD2-203ENST00000578067 UPF1Q92900 1129 aaKnown RBP eCLIP31.12■■■□□ 2.572e-6■■□□□ 12.9
LIMD2-203ENST00000578067 GDAQ9Y2T3 454 aa31.12■■■□□ 2.57
LIMD2-203ENST00000578067 ASTN2O75129 1339 aaPredicted RBP31.11■■■□□ 2.57
LIMD2-203ENST00000578067 PIK3CDO00329 1044 aa31.11■■■□□ 2.57
LIMD2-203ENST00000578067 VSTM4Q8IW00 320 aa31.11■■■□□ 2.57
LIMD2-203ENST00000578067 CCDC150Q8NCX0 1101 aa31.11■■■□□ 2.57
LIMD2-203ENST00000578067 SNX29Q8TEQ0 813 aa31.11■■■□□ 2.57
LIMD2-203ENST00000578067 TRIM9Q9C026 710 aa31.11■■■□□ 2.57
LIMD2-203ENST00000578067 SREBF1P36956 1147 aa31.1■■■□□ 2.57
LIMD2-203ENST00000578067 PAK1Q13153 545 aa31.1■■■□□ 2.57
LIMD2-203ENST00000578067 ZNF341Q9BYN7 854 aa31.1■■■□□ 2.57
LIMD2-203ENST00000578067 KCNMB3Q9NPA1 279 aa31.1■■■□□ 2.57
LIMD2-203ENST00000578067 GINM1Q9NU53 330 aa31.1■■■□□ 2.57
LIMD2-203ENST00000578067 ZNF541Q9H0D2 1346 aa31.1■■■□□ 2.57
LIMD2-203ENST00000578067 CDKAL1Q5VV42 579 aa31.1■■■□□ 2.57
LIMD2-203ENST00000578067 CCDC47Q96A33 483 aaKnown RBP31.1■■■□□ 2.57
LIMD2-203ENST00000578067 BLOC1S4Q9NUP1 217 aa31.1■■■□□ 2.57
LIMD2-203ENST00000578067 INTS13Q9NVM9 706 aa31.1■■■□□ 2.57
LIMD2-203ENST00000578067 PRCPP42785 496 aa31.09■■■□□ 2.57
LIMD2-203ENST00000578067 CCDC174Q6PII3 467 aa31.09■■■□□ 2.57
LIMD2-203ENST00000578067 SV2BQ7L1I2 683 aa31.09■■■□□ 2.57
LIMD2-203ENST00000578067 FEZ1Q99689 392 aa31.09■■■□□ 2.57
LIMD2-203ENST00000578067 DEFB129Q9H1M3 183 aa31.09■■■□□ 2.57
LIMD2-203ENST00000578067 NELFBQ8WX92 580 aa31.08■■■□□ 2.57
LIMD2-203ENST00000578067 SKILP12757 684 aa31.08■■■□□ 2.57
LIMD2-203ENST00000578067 CCZ1BP86790 482 aa31.08■■■□□ 2.57
LIMD2-203ENST00000578067 CCZ1P86791 482 aaPredicted RBP31.08■■■□□ 2.57
LIMD2-203ENST00000578067 TPD52L1Q16890 204 aaPredicted RBP31.08■■■□□ 2.57
LIMD2-203ENST00000578067 ADSSL1Q8N142 457 aa31.08■■■□□ 2.57
LIMD2-203ENST00000578067 GJA10Q969M2 543 aa31.08■■■□□ 2.57
LIMD2-203ENST00000578067 NUDT12Q9BQG2 462 aa31.08■■■□□ 2.57
LIMD2-203ENST00000578067 CTNND1O60716 968 aaKnown RBP31.07■■■□□ 2.56
LIMD2-203ENST00000578067 HOXA13P31271 388 aaPredicted RBP31.07■■■□□ 2.56
LIMD2-203ENST00000578067 Q4G0T1 1027 aa31.07■■■□□ 2.56
LIMD2-203ENST00000578067 TMEM119Q4V9L6 283 aa31.07■■■□□ 2.56
LIMD2-203ENST00000578067 SLFN12Q8IYM2 578 aa31.07■■■□□ 2.56
LIMD2-203ENST00000578067 GIMAP8Q8ND71 665 aaPredicted RBP31.07■■■□□ 2.56
LIMD2-203ENST00000578067 LARP4BQ92615 738 aaKnown RBP31.07■■■□□ 2.56
LIMD2-203ENST00000578067 ARMCX5Q6P1M9 558 aa31.07■■■□□ 2.56
LIMD2-203ENST00000578067 GTPBP4Q9BZE4 634 aaKnown RBP31.07■■■□□ 2.56
LIMD2-203ENST00000578067 ATAD5Q96QE3 1844 aa31.06■■■□□ 2.56
LIMD2-203ENST00000578067 H7C1D1 291 aa31.06■■■□□ 2.56
LIMD2-203ENST00000578067 ASIC1P78348 528 aa31.06■■■□□ 2.56
LIMD2-203ENST00000578067 SFPQP23246 707 aaKnown RBP eCLIP31.05■■■□□ 2.56
LIMD2-203ENST00000578067 STIM1Q13586 685 aa31.05■■■□□ 2.56
LIMD2-203ENST00000578067 RAD54LQ92698 747 aa31.05■■■□□ 2.56
LIMD2-203ENST00000578067 EXOC1Q9NV70 894 aa31.05■■■□□ 2.56
LIMD2-203ENST00000578067 FBXO28Q9NVF7 368 aa31.05■■■□□ 2.56
LIMD2-203ENST00000578067 MAPK8IP1Q9UQF2 711 aa31.05■■■□□ 2.56
LIMD2-203ENST00000578067 MRPL11Q9Y3B7 192 aaKnown RBP31.05■■■□□ 2.56
LIMD2-203ENST00000578067 A0A1B0GTH6 734 aa31.05■■■□□ 2.56
LIMD2-203ENST00000578067 TBX3O15119 743 aa31.05■■■□□ 2.56
LIMD2-203ENST00000578067 CIITAP33076 1130 aa31.05■■■□□ 2.56
LIMD2-203ENST00000578067 MCM6Q14566 821 aa31.05■■■□□ 2.56
LIMD2-203ENST00000578067 NR1I3Q14994 352 aa31.05■■■□□ 2.56
LIMD2-203ENST00000578067 PRR16Q569H4 304 aa31.05■■■□□ 2.56
LIMD2-203ENST00000578067 CYP3A4P08684 503 aa31.04■■■□□ 2.56
LIMD2-203ENST00000578067 APTXQ7Z2E3 356 aaKnown RBP31.04■■■□□ 2.56
LIMD2-203ENST00000578067 LPAR1Q92633 364 aa31.04■■■□□ 2.56
LIMD2-203ENST00000578067 CTAGE1Q96RT6 745 aa31.04■■■□□ 2.56
LIMD2-203ENST00000578067 KIAA1683Q9H0B3 1180 aa31.04■■■□□ 2.56
LIMD2-203ENST00000578067 SLC26A4O43511 780 aa31.03■■■□□ 2.56
LIMD2-203ENST00000578067 PDE4DQ08499 809 aa31.03■■■□□ 2.56
LIMD2-203ENST00000578067 DNTTIP2Q5QJE6 756 aaKnown RBP31.03■■■□□ 2.56
LIMD2-203ENST00000578067 HYIQ5T013 277 aa31.03■■■□□ 2.56
LIMD2-203ENST00000578067 NBPF12Q5TAG4 269 aaPredicted RBP31.03■■■□□ 2.56
LIMD2-203ENST00000578067 ETNPPLQ8TBG4 499 aa31.03■■■□□ 2.56
LIMD2-203ENST00000578067 LRRC27Q9C0I9 530 aa31.03■■■□□ 2.56
LIMD2-203ENST00000578067 KDM3AQ9Y4C1 1321 aa31.03■■■□□ 2.56
LIMD2-203ENST00000578067 GCOM1H8Y6P7 765 aaPredicted RBP31.03■■■□□ 2.56
LIMD2-203ENST00000578067 WDR46O15213 610 aaKnown RBP31.03■■■□□ 2.56
LIMD2-203ENST00000578067 COBLO75128 1261 aa31.03■■■□□ 2.56
LIMD2-203ENST00000578067 CFBP00751 764 aa31.03■■■□□ 2.56
LIMD2-203ENST00000578067 POLR2MP0CAP2 368 aa31.03■■■□□ 2.56
LIMD2-203ENST00000578067 DCAF15Q66K64 600 aa31.03■■■□□ 2.56
LIMD2-203ENST00000578067 SAMD1Q6SPF0 538 aaPredicted RBP31.03■■■□□ 2.56
LIMD2-203ENST00000578067 NT5C3AQ9H0P0 336 aa31.03■■■□□ 2.56
LIMD2-203ENST00000578067 ABCB11O95342 1321 aa31.03■■■□□ 2.56
LIMD2-203ENST00000578067 INPP5BP32019 993 aa31.02■■■□□ 2.56
LIMD2-203ENST00000578067 FCHSD1Q86WN1 690 aa31.02■■■□□ 2.56
LIMD2-203ENST00000578067 LENG9Q96B70 501 aa31.02■■■□□ 2.56
LIMD2-203ENST00000578067 FAM86B1E9PN63 330 aa31.02■■■□□ 2.56
LIMD2-203ENST00000578067 FAM86B2P0C5J1 330 aa31.02■■■□□ 2.56
LIMD2-203ENST00000578067 CCT6AP40227 531 aaKnown RBP31.02■■■□□ 2.56
LIMD2-203ENST00000578067 LDHDQ86WU2 507 aa31.02■■■□□ 2.56
LIMD2-203ENST00000578067 MYMKA6NI61 221 aa31.01■■■□□ 2.55
LIMD2-203ENST00000578067 PSMA7O14818 248 aa31.01■■■□□ 2.55
LIMD2-203ENST00000578067 ECM1Q16610 540 aa31.01■■■□□ 2.55
LIMD2-203ENST00000578067 KCNK18Q7Z418 384 aa31.01■■■□□ 2.55
LIMD2-203ENST00000578067 APOBEC3FQ8IUX4 373 aaKnown RBP31.01■■■□□ 2.55
LIMD2-203ENST00000578067 TBC1D5Q92609 795 aa31.01■■■□□ 2.55
LIMD2-203ENST00000578067 FAM20AQ96MK3 541 aa31.01■■■□□ 2.55
LIMD2-203ENST00000578067 UIMC1Q96RL1 719 aa31.01■■■□□ 2.55
LIMD2-203ENST00000578067 PVALEFA0A1B0GWK0 134 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms