RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 COL20A1Q9P218 1284 aa19.43■□□□□ 0.7
CDK5RAP3-206ENST00000578018 CHD9Q3L8U1 2897 aa19.42■□□□□ 0.7
CDK5RAP3-206ENST00000578018 DHX16O60231 1041 aaKnown RBP19.42■□□□□ 0.7
CDK5RAP3-206ENST00000578018 ARIH2O95376 493 aa19.42■□□□□ 0.7
CDK5RAP3-206ENST00000578018 MYL3P08590 195 aa19.42■□□□□ 0.7
CDK5RAP3-206ENST00000578018 IFIT1BQ5T764 474 aaKnown RBP19.42■□□□□ 0.7
CDK5RAP3-206ENST00000578018 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.42■□□□□ 0.7
CDK5RAP3-206ENST00000578018 MAFAQ8NHW3 353 aaPredicted RBP19.42■□□□□ 0.7
CDK5RAP3-206ENST00000578018 MTG1Q9BT17 334 aaPredicted RBP19.42■□□□□ 0.7
CDK5RAP3-206ENST00000578018 TANC1Q9C0D5 1861 aa19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 A6NJR5 290 aa19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 TXNP10599 105 aaKnown RBP19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 FOSL2P15408 326 aa19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 CCL23P55773 120 aa19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 TTLL4Q14679 1199 aa19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 BRDTQ58F21 947 aaPredicted RBP19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 CYB5R4Q7L1T6 521 aa19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 FBXO11Q86XK2 927 aa19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 MCF2L2Q86YR7 1114 aa19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 STAG2Q8N3U4 1231 aa19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 HERVK_113Q902F9 699 aa19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 TIFAQ96CG3 184 aa19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 TRMT13Q9NUP7 481 aaKnown RBP19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 VCANP13611 3396 aa19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 SCN5AQ14524 2016 aa19.41■□□□□ 0.7
CDK5RAP3-206ENST00000578018 BAZ2BQ9UIF8 2168 aaKnown RBP19.4■□□□□ 0.7
CDK5RAP3-206ENST00000578018 GRXCR1A8MXD5 290 aa19.4■□□□□ 0.7
CDK5RAP3-206ENST00000578018 CHMLP26374 656 aa19.4■□□□□ 0.7
CDK5RAP3-206ENST00000578018 CCDC62Q6P9F0 684 aa19.4■□□□□ 0.7
CDK5RAP3-206ENST00000578018 NSUN6Q8TEA1 469 aaKnown RBP19.4■□□□□ 0.7
CDK5RAP3-206ENST00000578018 TAAR1Q96RJ0 339 aa19.4■□□□□ 0.7
CDK5RAP3-206ENST00000578018 PBX4Q9BYU1 374 aa19.4■□□□□ 0.7
CDK5RAP3-206ENST00000578018 VAT1LQ9HCJ6 419 aa19.4■□□□□ 0.7
CDK5RAP3-206ENST00000578018 GPHNQ9NQX3 736 aaPredicted RBP19.4■□□□□ 0.7
CDK5RAP3-206ENST00000578018 CXXC1Q9P0U4 656 aaPredicted RBP19.4■□□□□ 0.7
CDK5RAP3-206ENST00000578018 MRPL11Q9Y3B7 192 aaKnown RBP19.4■□□□□ 0.7
CDK5RAP3-206ENST00000578018 TTC28Q96AY4 2481 aa19.4■□□□□ 0.7
CDK5RAP3-206ENST00000578018 KPNA6O60684 536 aa19.39■□□□□ 0.69
CDK5RAP3-206ENST00000578018 CYP21A2P08686 494 aa19.39■□□□□ 0.69
CDK5RAP3-206ENST00000578018 SUPT20HL2P0C7V6 817 aa19.39■□□□□ 0.69
CDK5RAP3-206ENST00000578018 PBX2P40425 430 aa19.39■□□□□ 0.69
CDK5RAP3-206ENST00000578018 IRX6P78412 446 aaPredicted RBP19.39■□□□□ 0.69
CDK5RAP3-206ENST00000578018 PTH1RQ03431 593 aa19.39■□□□□ 0.69
CDK5RAP3-206ENST00000578018 GRIN2CQ14957 1233 aa19.39■□□□□ 0.69
CDK5RAP3-206ENST00000578018 RUFY2Q8WXA3 655 aa19.39■□□□□ 0.69
CDK5RAP3-206ENST00000578018 VWCEQ96DN2 955 aa19.39■□□□□ 0.69
CDK5RAP3-206ENST00000578018 MTMR8Q96EF0 704 aa19.39■□□□□ 0.69
CDK5RAP3-206ENST00000578018 ZNF576Q9H609 170 aa19.39■□□□□ 0.69
CDK5RAP3-206ENST00000578018 MAD2L2Q9UI95 211 aa19.39■□□□□ 0.69
CDK5RAP3-206ENST00000578018 KLRF2D3W0D1 207 aa19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 OPLAHO14841 1288 aa19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 PPP1R11O60927 126 aaPredicted RBP19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 FGBP02675 491 aa19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 CYP2C9P11712 490 aa19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 GHRHRQ02643 423 aa19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 TRDNQ13061 729 aa19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 NBPF20Q3BBV1 942 aa19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 NFRKBQ6P4R8 1299 aa19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 SCLYQ96I15 445 aa19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 IWS1Q96ST2 819 aa19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 RMDN3Q96TC7 470 aa19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 AMNQ9BXJ7 453 aa19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 MTIF3Q9H2K0 278 aaKnown RBP19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 U3KPZ7 1027 aaPredicted RBP19.38■□□□□ 0.69
CDK5RAP3-206ENST00000578018 PALM3A6NDB9 673 aaPredicted RBP19.37■□□□□ 0.69
CDK5RAP3-206ENST00000578018 ARHGAP1Q07960 439 aa19.37■□□□□ 0.69
CDK5RAP3-206ENST00000578018 STXBP2Q15833 593 aa19.37■□□□□ 0.69
CDK5RAP3-206ENST00000578018 FAM47CQ5HY64 1035 aa19.37■□□□□ 0.69
CDK5RAP3-206ENST00000578018 SEPT14Q6ZU15 432 aa19.37■□□□□ 0.69
CDK5RAP3-206ENST00000578018 OTOP2Q7RTS6 562 aa19.37■□□□□ 0.69
CDK5RAP3-206ENST00000578018 PPP1R13LQ8WUF5 828 aa19.37■□□□□ 0.69
CDK5RAP3-206ENST00000578018 TAF6LQ9Y6J9 622 aa19.37■□□□□ 0.69
CDK5RAP3-206ENST00000578018 CHD7Q9P2D1 2997 aa19.37■□□□□ 0.69
CDK5RAP3-206ENST00000578018 ZBTB5O15062 677 aa19.36■□□□□ 0.69
CDK5RAP3-206ENST00000578018 SGSM2O43147 1006 aa19.36■□□□□ 0.69
CDK5RAP3-206ENST00000578018 CFBP00751 764 aa19.36■□□□□ 0.69
CDK5RAP3-206ENST00000578018 GH1P01241 217 aa19.36■□□□□ 0.69
CDK5RAP3-206ENST00000578018 MMP3P08254 477 aa19.36■□□□□ 0.69
CDK5RAP3-206ENST00000578018 EIF2AK2P19525 551 aaKnown RBP19.36■□□□□ 0.69
CDK5RAP3-206ENST00000578018 HSD17B4P51659 736 aa19.36■□□□□ 0.69
CDK5RAP3-206ENST00000578018 GRM4Q14833 912 aa19.36■□□□□ 0.69
CDK5RAP3-206ENST00000578018 LY6KQ17RY6 165 aa19.36■□□□□ 0.69
CDK5RAP3-206ENST00000578018 SLC35G1Q2M3R5 365 aa19.36■□□□□ 0.69
CDK5RAP3-206ENST00000578018 AFG1LQ8WV93 481 aa19.36■□□□□ 0.69
CDK5RAP3-206ENST00000578018 PXMP2Q9NR77 195 aa19.36■□□□□ 0.69
CDK5RAP3-206ENST00000578018 MYH7BA7E2Y1 1941 aa19.35■□□□□ 0.69
CDK5RAP3-206ENST00000578018 PTPN11Q06124 597 aaPredicted RBP19.35■□□□□ 0.69
CDK5RAP3-206ENST00000578018 RAB30Q15771 203 aa19.35■□□□□ 0.69
CDK5RAP3-206ENST00000578018 ARHGEF16Q5VV41 709 aa19.35■□□□□ 0.69
CDK5RAP3-206ENST00000578018 STOX1Q6ZVD7 989 aa19.35■□□□□ 0.69
CDK5RAP3-206ENST00000578018 RPUSD2Q8IZ73 545 aaKnown RBP19.35■□□□□ 0.69
CDK5RAP3-206ENST00000578018 SENP2Q9HC62 589 aa19.35■□□□□ 0.69
CDK5RAP3-206ENST00000578018 TRIP12Q14669 1992 aaPredicted RBP19.35■□□□□ 0.69
CDK5RAP3-206ENST00000578018 TET1Q8NFU7 2136 aa19.34■□□□□ 0.69
CDK5RAP3-206ENST00000578018 E7EWF7 191 aa19.34■□□□□ 0.69
CDK5RAP3-206ENST00000578018 IFIT3O14879 490 aaKnown RBP19.34■□□□□ 0.69
CDK5RAP3-206ENST00000578018 NR3C2P08235 984 aa19.34■□□□□ 0.69
CDK5RAP3-206ENST00000578018 PFKMP08237 780 aa19.34■□□□□ 0.69
CDK5RAP3-206ENST00000578018 RALYLQ86SE5 291 aaKnown RBP19.34■□□□□ 0.69
CDK5RAP3-206ENST00000578018 COL25A1Q9BXS0 654 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms