RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 CSF2RAP15509 400 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 ADD2P35612 726 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 ACVR2BQ13705 512 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.21□□□□□ -1.16e-7■■□□□ 13.5
SMARCE1-212ENST00000577721 PLA2G4EQ3MJ16 856 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 TMEM240Q5SV17 173 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 C16orf86Q6ZW13 317 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 ZNF365Q70YC5 407 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 LINC00528Q8N1L1 170 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 ANKRD35Q8N283 1001 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 MSL3Q8N5Y2 521 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 ZNF511Q8NB15 262 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 FAM174AQ8TBP5 190 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 PANK1Q8TE04 598 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 ATXN2LQ8WWM7 1075 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 NUP88Q99567 741 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 SPOCK3Q9BQ16 436 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 TEX13BQ9BXU2 312 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 KRTAP9-2Q9BYQ4 174 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 PBX4Q9BYU1 374 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 ZFAND3Q9H8U3 227 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 CLIP2Q9UDT6 1046 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 DNMT3LQ9UJW3 386 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 ZNF214Q9UL59 606 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 ISY1Q9ULR0 285 aaKnown RBP8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 ELP1O95163 1332 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 SYNGAP1Q96PV0 1343 aa8.21□□□□□ -1.1
SMARCE1-212ENST00000577721 MAST2Q6P0Q8 1798 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 MINDY4BA8MYZ0 360 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 F5H6K3 240 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 HMMRO75330 724 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 FGBP02675 491 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 CDK7P50613 346 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 MRPS5P82675 430 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 KLRC3Q07444 240 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 RAB30Q15771 203 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 CCDC144BQ3MJ40 725 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 ZSCAN25Q6NSZ9 544 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 CTR9Q6PD62 1173 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 C16orf59Q7L2K0 433 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 PRPF38AQ8NAV1 312 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 REPS2Q8NFH8 660 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 NANOS1Q8WY41 292 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 ASB2Q96Q27 587 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 MTIF3Q9H2K0 278 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 RAVER2Q9HCJ3 691 aaKnown RBP8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 THEGQ9P2T0 379 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 TBX21Q9UL17 535 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 RIPK3Q9Y572 518 aa8.2□□□□□ -1.1
SMARCE1-212ENST00000577721 RAB11FIP3O75154 756 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 NDUFB10O96000 172 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 ATP5JP18859 108 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 CYP2C18P33260 490 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 UBE3CQ15386 1083 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 AKNAD1Q5T1N1 836 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 CCSAPQ6IQ19 270 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 PSRC1Q6PGN9 363 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 MAMDC4Q6UXC1 1216 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 ZNF444Q8N0Y2 327 aaPredicted RBP8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 MICALL1Q8N3F8 863 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 Q8N3U1 123 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 ITPKCQ96DU7 683 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 NKX2-4Q9H2Z4 354 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 ABHD16BQ9H3Z7 469 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 SLC28A3Q9HAS3 691 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 FBXO40Q9UH90 709 aa8.19□□□□□ -1.1
SMARCE1-212ENST00000577721 DNAJC25-GNG10A0A024R161 153 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 ZEB2O60315 1214 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 CHGBP05060 677 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 APPP05067 770 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 CST5P28325 142 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 CCL23P55773 120 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 GJA9P57773 515 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 HNRNPUQ00839 825 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 BEX3Q00994 111 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 TNFAIP2Q03169 654 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 IKQ13123 557 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 ARID5BQ14865 1188 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 SKIV2LQ15477 1246 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 RNFT1Q5M7Z0 435 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 ARMCX2Q7L311 632 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 OTOP2Q7RTS6 562 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 RPAP2Q8IXW5 612 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 CCDC144CPQ8IYA2 1237 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 CHST13Q8NET6 341 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 ADAMTS19Q8TE59 1207 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 HERVK_113Q902F9 699 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 CHMP4CQ96CF2 233 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 UHRF1Q96T88 793 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 HAUS7Q99871 368 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 PUS7LQ9H0K6 701 aaKnown RBP8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 AP5M1Q9H0R1 490 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 HIPK3Q9H422 1215 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 IL23AQ9NPF7 189 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 HOMER2Q9NSB8 354 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 EVA1BQ9NVM1 165 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 NYAP2Q9P242 653 aa8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 ARPP21Q9UBL0 812 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1-212ENST00000577721 RAPGEFL1Q9UHV5 662 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms