RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 PURBQ96QR8 312 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP3-203ENST00000577442 SLC26A6Q9BXS9 759 aa14.63□□□□□ -0.07
CDK5RAP3-203ENST00000577442 BACH2Q9BYV9 841 aa14.63□□□□□ -0.07
CDK5RAP3-203ENST00000577442 PSTPIP2Q9H939 334 aa14.63□□□□□ -0.07
CDK5RAP3-203ENST00000577442 BARHL2Q9NY43 387 aa14.63□□□□□ -0.07
CDK5RAP3-203ENST00000577442 COL20A1Q9P218 1284 aa14.63□□□□□ -0.07
CDK5RAP3-203ENST00000577442 OGDHLQ9ULD0 1010 aa14.63□□□□□ -0.07
CDK5RAP3-203ENST00000577442 FAM184BQ9ULE4 1060 aa14.63□□□□□ -0.07
CDK5RAP3-203ENST00000577442 FARP2O94887 1054 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-203ENST00000577442 HOXA13P31271 388 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-203ENST00000577442 RGS19P49795 217 aa14.62□□□□□ -0.07
CDK5RAP3-203ENST00000577442 SSRP1Q08945 709 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP3-203ENST00000577442 LHX8Q68G74 356 aa14.62□□□□□ -0.07
CDK5RAP3-203ENST00000577442 NOL8Q76FK4 1167 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP3-203ENST00000577442 CCDC148Q8NFR7 591 aa14.62□□□□□ -0.07
CDK5RAP3-203ENST00000577442 PHKBQ93100 1093 aa14.62□□□□□ -0.07
CDK5RAP3-203ENST00000577442 TAAR1Q96RJ0 339 aa14.62□□□□□ -0.07
CDK5RAP3-203ENST00000577442 LARP6Q9BRS8 491 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP3-203ENST00000577442 PXMP2Q9NR77 195 aa14.62□□□□□ -0.07
CDK5RAP3-203ENST00000577442 STXBP3O00186 592 aa14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 ST18O60284 1047 aa14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 DEXIO95424 95 aa14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 EIF2AK2P19525 551 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 ADCY7P51828 1080 aa14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 SCRN1Q12765 414 aa14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 STXBP2Q15833 593 aa14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 CCDC144BQ3MJ40 725 aa14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 FCHSD1Q86WN1 690 aa14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 FBXO16Q8IX29 292 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 ARRDC4Q8NCT1 418 aa14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 GTF3C6Q969F1 213 aa14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 KIF2CQ99661 725 aa14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 KATNBL1Q9H079 304 aa14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 EHMT1Q9H9B1 1298 aa14.61□□□□□ -0.07
CDK5RAP3-203ENST00000577442 KIAA1217Q5T5P2 1943 aa14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 ESYT2A0FGR8 921 aa14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 SPDYE3A6NKU9 549 aa14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 DUSP11O75319 330 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 NR3C2P08235 984 aa14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 CCND2P30279 289 aa14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 EEPD1Q7L9B9 569 aa14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 FAM177A1Q8N128 213 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 SCFD2Q8WU76 684 aa14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 ZSCAN31Q96LW9 406 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 PDCD2LQ9BRP1 358 aa14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 SPC25Q9HBM1 224 aa14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 RIC8AQ9NPQ8 531 aa14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 LIMCH1Q9UPQ0 1083 aa14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 FRMPD4Q14CM0 1322 aa14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 STK36Q9NRP7 1315 aa14.6□□□□□ -0.07
CDK5RAP3-203ENST00000577442 KBTBD13C9JR72 458 aa14.59□□□□□ -0.07
CDK5RAP3-203ENST00000577442 MEIS2O14770 477 aa14.59□□□□□ -0.07
CDK5RAP3-203ENST00000577442 FOSP01100 380 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-203ENST00000577442 GNA11P29992 359 aa14.59□□□□□ -0.07
CDK5RAP3-203ENST00000577442 TNFAIP2Q03169 654 aa14.59□□□□□ -0.07
CDK5RAP3-203ENST00000577442 ME3Q16798 604 aa14.59□□□□□ -0.07
CDK5RAP3-203ENST00000577442 ANO1Q5XXA6 986 aa14.59□□□□□ -0.07
CDK5RAP3-203ENST00000577442 IQSEC1Q6DN90 963 aa14.59□□□□□ -0.07
CDK5RAP3-203ENST00000577442 USP17L6PQ6QN14 398 aa14.59□□□□□ -0.07
CDK5RAP3-203ENST00000577442 C6orf50Q9HD87 102 aa14.59□□□□□ -0.07
CDK5RAP3-203ENST00000577442 XPNPEP3Q9NQH7 507 aa14.59□□□□□ -0.07
CDK5RAP3-203ENST00000577442 SH3GLB2Q9NR46 395 aa14.59□□□□□ -0.07
CDK5RAP3-203ENST00000577442 SH2B1Q9NRF2 756 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-203ENST00000577442 RBM47A0AV96 593 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 SMCO2A6NFE2 343 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 DNM1LO00429 736 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 NKRFO15226 690 aaKnown RBP eCLIP14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 EIF3JO75822 258 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 STAM2O75886 525 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 ADCYAP1R1P41586 468 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 AP3B2Q13367 1082 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 TTLL4Q14679 1199 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 PGM5Q15124 567 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 PKN1Q16512 942 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 MCTP2Q6DN12 878 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 TYW1BQ6NUM6 668 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 TAPT1Q6NXT6 567 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 XRRA1Q6P2D8 792 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 NECAB2Q7Z6G3 386 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 RNF180Q86T96 592 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 BICD2Q8TD16 824 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 WASF1Q92558 559 aa14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 DDX49Q9Y6V7 483 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-203ENST00000577442 PPFIA3O75145 1194 aa14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 LARGE1O95461 756 aa14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 MYCLP12524 364 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 XBP1P17861 261 aa14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 MCM2P49736 904 aa14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 MLLT1Q03111 559 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 UBE2SQ16763 222 aa14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 GNPTABQ3T906 1256 aa14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 DUSP28Q4G0W2 176 aa14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 VSIG10LQ86VR7 867 aa14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 REXO1Q8N1G1 1221 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 NECAB1Q8N987 351 aa14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 WDR11Q9BZH6 1224 aa14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 ZMYND12Q9H0C1 365 aa14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 AP5M1Q9H0R1 490 aa14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 UPF3AQ9H1J1 476 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-203ENST00000577442 Q9Y3F1 56 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms