RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 WWC2Q6AWC2 1192 aa17.5■□□□□ 0.39
LITAF-217ENST00000575426 ANKLE1Q8NAG6 615 aa17.5■□□□□ 0.39
LITAF-217ENST00000575426 MORC4Q8TE76 937 aa17.5■□□□□ 0.39
LITAF-217ENST00000575426 CCDC12Q8WUD4 166 aaPredicted RBP17.5■□□□□ 0.39
LITAF-217ENST00000575426 COL20A1Q9P218 1284 aa17.5■□□□□ 0.39
LITAF-217ENST00000575426 LRRC37A2A6NM11 1700 aa17.5■□□□□ 0.39
LITAF-217ENST00000575426 EIF2AK2P19525 551 aaKnown RBP17.49■□□□□ 0.39
LITAF-217ENST00000575426 RABEP1Q15276 862 aa17.49■□□□□ 0.39
LITAF-217ENST00000575426 STXBP2Q15833 593 aa17.49■□□□□ 0.39
LITAF-217ENST00000575426 CCDC144BQ3MJ40 725 aa17.49■□□□□ 0.39
LITAF-217ENST00000575426 PPP1R18Q6NYC8 613 aa17.49■□□□□ 0.39
LITAF-217ENST00000575426 ARRDC4Q8NCT1 418 aa17.49■□□□□ 0.39
LITAF-217ENST00000575426 IL27Q8NEV9 243 aa17.49■□□□□ 0.39
LITAF-217ENST00000575426 GLT8D2Q9H1C3 349 aa17.49■□□□□ 0.39
LITAF-217ENST00000575426 PXMP2Q9NR77 195 aa17.49■□□□□ 0.39
LITAF-217ENST00000575426 BARHL2Q9NY43 387 aa17.49■□□□□ 0.39
LITAF-217ENST00000575426 OGDHLQ9ULD0 1010 aa17.49■□□□□ 0.39
LITAF-217ENST00000575426 MYH7BA7E2Y1 1941 aa17.49■□□□□ 0.39
LITAF-217ENST00000575426 STXBP3O00186 592 aa17.48■□□□□ 0.39
LITAF-217ENST00000575426 PIK3CDO00329 1044 aa17.48■□□□□ 0.39
LITAF-217ENST00000575426 ST18O60284 1047 aa17.48■□□□□ 0.39
LITAF-217ENST00000575426 FARP2O94887 1054 aaPredicted RBP17.48■□□□□ 0.39
LITAF-217ENST00000575426 MYCNP04198 464 aaPredicted RBP17.48■□□□□ 0.39
LITAF-217ENST00000575426 SCRN1Q12765 414 aa17.48■□□□□ 0.39
LITAF-217ENST00000575426 IQSEC1Q6DN90 963 aa17.48■□□□□ 0.39
LITAF-217ENST00000575426 USP17L6PQ6QN14 398 aa17.48■□□□□ 0.39
LITAF-217ENST00000575426 FBXO16Q8IX29 292 aaPredicted RBP17.48■□□□□ 0.39
LITAF-217ENST00000575426 SHISA4Q96DD7 197 aa17.48■□□□□ 0.39
LITAF-217ENST00000575426 KIF2CQ99661 725 aa17.48■□□□□ 0.39
LITAF-217ENST00000575426 SPC25Q9HBM1 224 aa17.48■□□□□ 0.39
LITAF-217ENST00000575426 XPNPEP3Q9NQH7 507 aa17.48■□□□□ 0.39
LITAF-217ENST00000575426 LIMCH1Q9UPQ0 1083 aa17.48■□□□□ 0.39
LITAF-217ENST00000575426 SMCO2A6NFE2 343 aa17.47■□□□□ 0.39
LITAF-217ENST00000575426 PPFIA3O75145 1194 aa17.47■□□□□ 0.39
LITAF-217ENST00000575426 NR3C2P08235 984 aa17.47■□□□□ 0.39
LITAF-217ENST00000575426 MYCLP12524 364 aaPredicted RBP17.47■□□□□ 0.39
LITAF-217ENST00000575426 EDNRBP24530 442 aa17.47■□□□□ 0.39
LITAF-217ENST00000575426 ADCY7P51828 1080 aa17.47■□□□□ 0.39
LITAF-217ENST00000575426 TNFAIP2Q03169 654 aa17.47■□□□□ 0.39
LITAF-217ENST00000575426 ZSCAN31Q96LW9 406 aaPredicted RBP17.47■□□□□ 0.39
LITAF-217ENST00000575426 TBC1D32Q96NH3 1257 aa17.47■□□□□ 0.39
LITAF-217ENST00000575426 EHMT1Q9H9B1 1298 aa17.47■□□□□ 0.39
LITAF-217ENST00000575426 C6orf50Q9HD87 102 aa17.47■□□□□ 0.39
LITAF-217ENST00000575426 DDX49Q9Y6V7 483 aaKnown RBP17.47■□□□□ 0.39
LITAF-217ENST00000575426 SPDYE3A6NKU9 549 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 KBTBD13C9JR72 458 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 MEIS2O14770 477 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 DUSP11O75319 330 aaKnown RBP17.46■□□□□ 0.39
LITAF-217ENST00000575426 DEXIO95424 95 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 CCND2P30279 289 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 ADCYAP1R1P41586 468 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 MLLT1Q03111 559 aaPredicted RBP17.46■□□□□ 0.39
LITAF-217ENST00000575426 PKN1Q16512 942 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 ME3Q16798 604 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 TAPT1Q6NXT6 567 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 NECAB2Q7Z6G3 386 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 RNF180Q86T96 592 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 TEX2Q8IWB9 1127 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 CCDC148Q8NFR7 591 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 PDCD2LQ9BRP1 358 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 KATNBL1Q9H079 304 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 RIC8AQ9NPQ8 531 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 PDGFCQ9NRA1 345 aa17.46■□□□□ 0.39
LITAF-217ENST00000575426 EIF3JO75822 258 aaKnown RBP17.45■□□□□ 0.38
LITAF-217ENST00000575426 GNA11P29992 359 aa17.45■□□□□ 0.38
LITAF-217ENST00000575426 PGM5Q15124 567 aa17.45■□□□□ 0.38
LITAF-217ENST00000575426 UBE2SQ16763 222 aa17.45■□□□□ 0.38
LITAF-217ENST00000575426 NECAB1Q8N987 351 aa17.45■□□□□ 0.38
LITAF-217ENST00000575426 SCFD2Q8WU76 684 aa17.45■□□□□ 0.38
LITAF-217ENST00000575426 WDR11Q9BZH6 1224 aa17.45■□□□□ 0.38
LITAF-217ENST00000575426 AP5M1Q9H0R1 490 aa17.45■□□□□ 0.38
LITAF-217ENST00000575426 SH3GLB2Q9NR46 395 aa17.45■□□□□ 0.38
LITAF-217ENST00000575426 PGK1P00558 417 aa17.44■□□□□ 0.38
LITAF-217ENST00000575426 FOSP01100 380 aaPredicted RBP17.44■□□□□ 0.38
LITAF-217ENST00000575426 TTLL4Q14679 1199 aa17.44■□□□□ 0.38
LITAF-217ENST00000575426 GJC2Q5T442 439 aaPredicted RBP17.44■□□□□ 0.38
LITAF-217ENST00000575426 TYW1BQ6NUM6 668 aa17.44■□□□□ 0.38
LITAF-217ENST00000575426 SEPT14Q6ZU15 432 aa17.44■□□□□ 0.38
LITAF-217ENST00000575426 VSIG10LQ86VR7 867 aa17.44■□□□□ 0.38
LITAF-217ENST00000575426 BICD2Q8TD16 824 aa17.44■□□□□ 0.38
LITAF-217ENST00000575426 GTF3C6Q969F1 213 aa17.44■□□□□ 0.38
LITAF-217ENST00000575426 PAWRQ96IZ0 340 aaKnown RBP17.44■□□□□ 0.38
LITAF-217ENST00000575426 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.43■□□□□ 0.38
LITAF-217ENST00000575426 RBM47A0AV96 593 aaKnown RBP17.43■□□□□ 0.38
LITAF-217ENST00000575426 ESYT2A0FGR8 921 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 DNM1LO00429 736 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 NKRFO15226 690 aaKnown RBP eCLIP17.43■□□□□ 0.38
LITAF-217ENST00000575426 STAM2O75886 525 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 LARGE1O95461 756 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 TXNP10599 105 aaKnown RBP17.43■□□□□ 0.38
LITAF-217ENST00000575426 XBP1P17861 261 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 NLRP5P59047 1200 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 LRRC41Q15345 812 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 MCTP2Q6DN12 878 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 WASF1Q92558 559 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 LENG1Q96BZ8 264 aaPredicted RBP17.43■□□□□ 0.38
LITAF-217ENST00000575426 HTATIP2Q9BUP3 242 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 ZMYND12Q9H0C1 365 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 C11orf49Q9H6J7 331 aa17.43■□□□□ 0.38
LITAF-217ENST00000575426 SH2B1Q9NRF2 756 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms