RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 CCDC196A0A1B0GTZ2 297 aa23.9■■□□□ 1.42
HCFC1R1-208ENST00000575214 MYADML2A6NDP7 307 aa23.9■■□□□ 1.42
HCFC1R1-208ENST00000575214 GJA9P57773 515 aa23.9■■□□□ 1.42
HCFC1R1-208ENST00000575214 PPP2R5BQ15173 497 aa23.9■■□□□ 1.42
HCFC1R1-208ENST00000575214 LRRC26Q2I0M4 334 aa23.9■■□□□ 1.42
HCFC1R1-208ENST00000575214 FCHSD1Q86WN1 690 aa23.9■■□□□ 1.42
HCFC1R1-208ENST00000575214 C7orf61Q8IZ16 206 aa23.9■■□□□ 1.42
HCFC1R1-208ENST00000575214 IWS1Q96ST2 819 aa23.9■■□□□ 1.42
HCFC1R1-208ENST00000575214 UPF3AQ9H1J1 476 aaKnown RBP23.9■■□□□ 1.42
HCFC1R1-208ENST00000575214 FAM217BQ9NTX9 383 aaPredicted RBP23.9■■□□□ 1.42
HCFC1R1-208ENST00000575214 GNEQ9Y223 722 aaKnown RBP23.9■■□□□ 1.42
HCFC1R1-208ENST00000575214 ADD1P35611 737 aaKnown RBP23.89■■□□□ 1.41
HCFC1R1-208ENST00000575214 IRX5P78411 483 aaPredicted RBP23.89■■□□□ 1.41
HCFC1R1-208ENST00000575214 STXBP2Q15833 593 aa23.89■■□□□ 1.41
HCFC1R1-208ENST00000575214 HEATR3Q7Z4Q2 680 aa23.89■■□□□ 1.41
HCFC1R1-208ENST00000575214 KLHDC9Q8NEP7 349 aa23.89■■□□□ 1.41
HCFC1R1-208ENST00000575214 CUL5Q93034 780 aa23.89■■□□□ 1.41
HCFC1R1-208ENST00000575214 TSEN34Q9BSV6 310 aaKnown RBP23.89■■□□□ 1.41
HCFC1R1-208ENST00000575214 WDR11Q9BZH6 1224 aa23.89■■□□□ 1.41
HCFC1R1-208ENST00000575214 AP5M1Q9H0R1 490 aa23.89■■□□□ 1.41
HCFC1R1-208ENST00000575214 PHF24Q9UPV7 400 aa23.89■■□□□ 1.41
HCFC1R1-208ENST00000575214 CEP290O15078 2479 aa23.88■■□□□ 1.41
HCFC1R1-208ENST00000575214 H0YGN5 161 aa23.88■■□□□ 1.41
HCFC1R1-208ENST00000575214 DYNC1LI2O43237 492 aaPredicted RBP23.88■■□□□ 1.41
HCFC1R1-208ENST00000575214 PTGS1P23219 599 aa23.88■■□□□ 1.41
HCFC1R1-208ENST00000575214 CST5P28325 142 aaPredicted RBP23.88■■□□□ 1.41
HCFC1R1-208ENST00000575214 ANAPC15P60006 121 aa23.88■■□□□ 1.41
HCFC1R1-208ENST00000575214 FUT2Q10981 343 aa23.88■■□□□ 1.41
HCFC1R1-208ENST00000575214 TOB2Q14106 344 aaPredicted RBP23.88■■□□□ 1.41
HCFC1R1-208ENST00000575214 KCNA10Q16322 511 aa23.88■■□□□ 1.41
HCFC1R1-208ENST00000575214 TMEM63BQ5T3F8 832 aa23.88■■□□□ 1.41
HCFC1R1-208ENST00000575214 SCFD2Q8WU76 684 aa23.88■■□□□ 1.41
HCFC1R1-208ENST00000575214 GPKOWQ92917 476 aaPredicted RBP eCLIP23.88■■□□□ 1.41
HCFC1R1-208ENST00000575214 PDRG1Q9NUG6 133 aa23.88■■□□□ 1.41
HCFC1R1-208ENST00000575214 RBM47A0AV96 593 aaKnown RBP23.87■■□□□ 1.41
HCFC1R1-208ENST00000575214 SEC24BO95487 1268 aa23.87■■□□□ 1.41
HCFC1R1-208ENST00000575214 NR3C2P08235 984 aa23.87■■□□□ 1.41
HCFC1R1-208ENST00000575214 DUSP28Q4G0W2 176 aa23.87■■□□□ 1.41
HCFC1R1-208ENST00000575214 GNASQ5JWF2 1037 aa23.87■■□□□ 1.41
HCFC1R1-208ENST00000575214 PCSK9Q8NBP7 692 aaKnown RBP23.87■■□□□ 1.41
HCFC1R1-208ENST00000575214 SMARCC2Q8TAQ2 1214 aa23.87■■□□□ 1.41
HCFC1R1-208ENST00000575214 PDCD2LQ9BRP1 358 aa23.87■■□□□ 1.41
HCFC1R1-208ENST00000575214 V9GY48 417 aaPredicted RBP23.87■■□□□ 1.41
HCFC1R1-208ENST00000575214 NID2Q14112 1375 aa23.86■■□□□ 1.41
HCFC1R1-208ENST00000575214 A0A1W2PQ45 241 aaPredicted RBP23.86■■□□□ 1.41
HCFC1R1-208ENST00000575214 A0A1W2PQY0 241 aa23.86■■□□□ 1.41
HCFC1R1-208ENST00000575214 MOXD2PA6NHM9 499 aa23.86■■□□□ 1.41
HCFC1R1-208ENST00000575214 ACLYP53396 1101 aa23.86■■□□□ 1.41
HCFC1R1-208ENST00000575214 BEX3Q00994 111 aa23.86■■□□□ 1.41
HCFC1R1-208ENST00000575214 SLC39A5Q6ZMH5 540 aa23.86■■□□□ 1.41
HCFC1R1-208ENST00000575214 SEPT14Q6ZU15 432 aa23.86■■□□□ 1.41
HCFC1R1-208ENST00000575214 Q9Y3F1 56 aa23.86■■□□□ 1.41
HCFC1R1-208ENST00000575214 MYCLP12524 364 aaPredicted RBP23.85■■□□□ 1.41
HCFC1R1-208ENST00000575214 PDIA3P30101 505 aaKnown RBP23.85■■□□□ 1.41
HCFC1R1-208ENST00000575214 RTP1P59025 263 aa23.85■■□□□ 1.41
HCFC1R1-208ENST00000575214 TTLL4Q14679 1199 aa23.85■■□□□ 1.41
HCFC1R1-208ENST00000575214 PGM5Q15124 567 aa23.85■■□□□ 1.41
HCFC1R1-208ENST00000575214 WWC2Q6AWC2 1192 aa23.85■■□□□ 1.41
HCFC1R1-208ENST00000575214 CCSAPQ6IQ19 270 aaPredicted RBP23.85■■□□□ 1.41
HCFC1R1-208ENST00000575214 USP17L6PQ6QN14 398 aa23.85■■□□□ 1.41
HCFC1R1-208ENST00000575214 PSTPIP2Q9H939 334 aa23.85■■□□□ 1.41
HCFC1R1-208ENST00000575214 ALPK3Q96L96 1907 aa23.84■■□□□ 1.41
HCFC1R1-208ENST00000575214 NKRFO15226 690 aaKnown RBP eCLIP23.84■■□□□ 1.41
HCFC1R1-208ENST00000575214 CTAGE5O15320 804 aa23.84■■□□□ 1.41
HCFC1R1-208ENST00000575214 EIF3JO75822 258 aaKnown RBP23.84■■□□□ 1.41
HCFC1R1-208ENST00000575214 ASGR1P07306 291 aa23.84■■□□□ 1.41
HCFC1R1-208ENST00000575214 EVCP57679 992 aa23.84■■□□□ 1.41
HCFC1R1-208ENST00000575214 CCT2P78371 535 aaKnown RBP23.84■■□□□ 1.41
HCFC1R1-208ENST00000575214 FSCN1Q16658 493 aaKnown RBP23.84■■□□□ 1.41
HCFC1R1-208ENST00000575214 LARP6Q9BRS8 491 aaKnown RBP23.84■■□□□ 1.41
HCFC1R1-208ENST00000575214 STARD7Q9NQZ5 370 aa23.84■■□□□ 1.41
HCFC1R1-208ENST00000575214 ATP11BQ9Y2G3 1177 aa23.84■■□□□ 1.41
HCFC1R1-208ENST00000575214 PIK3CDO00329 1044 aa23.83■■□□□ 1.41
HCFC1R1-208ENST00000575214 MEIS2O14770 477 aa23.83■■□□□ 1.41
HCFC1R1-208ENST00000575214 TXNP10599 105 aaKnown RBP23.83■■□□□ 1.41
HCFC1R1-208ENST00000575214 CCND2P30279 289 aa23.83■■□□□ 1.41
HCFC1R1-208ENST00000575214 NAPAP54920 295 aa23.83■■□□□ 1.41
HCFC1R1-208ENST00000575214 NKX3-2P78367 333 aa23.83■■□□□ 1.41
HCFC1R1-208ENST00000575214 C8orf34Q49A92 452 aa23.83■■□□□ 1.41
HCFC1R1-208ENST00000575214 OR6J1Q8NGC5 347 aa23.83■■□□□ 1.41
HCFC1R1-208ENST00000575214 IL31RAQ8NI17 732 aa23.83■■□□□ 1.41
HCFC1R1-208ENST00000575214 ZMYND8Q9ULU4 1186 aaPredicted RBP23.83■■□□□ 1.41
HCFC1R1-208ENST00000575214 hCG_1984214I3L0E3 225 aa23.82■■□□□ 1.4
HCFC1R1-208ENST00000575214 ZEB2O60315 1214 aa23.82■■□□□ 1.4
HCFC1R1-208ENST00000575214 ARIH2O95376 493 aa23.82■■□□□ 1.4
HCFC1R1-208ENST00000575214 ZNF713Q8N859 430 aaPredicted RBP23.82■■□□□ 1.4
HCFC1R1-208ENST00000575214 COPS5Q92905 334 aa23.82■■□□□ 1.4
HCFC1R1-208ENST00000575214 VTI1AQ96AJ9 217 aa23.82■■□□□ 1.4
HCFC1R1-208ENST00000575214 GLT1D1Q96MS3 346 aa23.82■■□□□ 1.4
HCFC1R1-208ENST00000575214 NCOA5Q9HCD5 579 aaKnown RBP23.82■■□□□ 1.4
HCFC1R1-208ENST00000575214 AKAP17AQ02040 695 aaKnown RBP23.81■■□□□ 1.4
HCFC1R1-208ENST00000575214 SNX17Q15036 470 aa23.81■■□□□ 1.4
HCFC1R1-208ENST00000575214 UBE2SQ16763 222 aa23.81■■□□□ 1.4
HCFC1R1-208ENST00000575214 TRIM60Q495X7 471 aa23.81■■□□□ 1.4
HCFC1R1-208ENST00000575214 PPP1R18Q6NYC8 613 aa23.81■■□□□ 1.4
HCFC1R1-208ENST00000575214 VSIG10LQ86VR7 867 aa23.81■■□□□ 1.4
HCFC1R1-208ENST00000575214 ZNF274Q96GC6 653 aaPredicted RBP23.81■■□□□ 1.4
HCFC1R1-208ENST00000575214 STXBP3O00186 592 aa23.8■■□□□ 1.4
HCFC1R1-208ENST00000575214 SYN1P17600 705 aa23.8■■□□□ 1.4
HCFC1R1-208ENST00000575214 STK3Q13188 491 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms