RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	SF3A1	Q15459	793 aa	Known RBP	13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	XRRA1	Q6P2D8	792 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	CCAR1	Q8IX12	1150 aa	Known RBP	13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	DNER	Q8NFT8	737 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	KCNG4	Q8TDN1	519 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	CFHR5	Q9BXR6	569 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	PCDHB6	Q9Y5E3	794 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	CLIC4	Q9Y696	253 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	FRMPD4	Q14CM0	1322 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	RPTOR	Q8N122	1335 aa		13.55	□□□□□ -0.24
PRPF8-212	ENST00000575116	LAD1	O00515	517 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	PPP6R2	O75170	966 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	FCER1A	P12319	257 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	ATP2B1	P20020	1258 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	ARHGAP4	P98171	946 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	CEBPZ	Q03701	1054 aa	Known RBP	13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	KCTD2	Q14681	263 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	STK38	Q15208	465 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	PTPA	Q15257	358 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	LETM2	Q2VYF4	491 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	SLC30A10	Q6XR72	485 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	JMY	Q8N9B5	988 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	NSUN6	Q8TEA1	469 aa	Known RBP	13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	LEO1	Q8WVC0	666 aa	Predicted RBP	13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	CHAMP1	Q96JM3	812 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	PGBD1	Q96JS3	809 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	TAAR1	Q96RJ0	339 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	COL20A1	Q9P218	1284 aa		13.54	□□□□□ -0.24
PRPF8-212	ENST00000575116	LOC102724159	A0A0B4J2E5	919 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	DDX11L8	A8MPP1	907 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116		B4DLN1	442 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	SPTLC2	O15270	562 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	EDIL3	O43854	480 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	CCNT1	O60563	726 aa	Known RBP	13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	CRHR2	Q13324	411 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	PWP2	Q15269	919 aa	Known RBP	13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	ZNF174	Q15697	407 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	PCNX4	Q63HM2	1172 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	MBOAT7	Q96N66	472 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	IWS1	Q96ST2	819 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	RMDN3	Q96TC7	470 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	MMP19	Q99542	508 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	PORCN	Q9H237	461 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	EFCC1	Q9HA90	598 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	PXMP2	Q9NR77	195 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	ADD3	Q9UEY8	706 aa	Known RBP	13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	CPA4	Q9UI42	421 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	IVNS1ABP	Q9Y6Y0	642 aa		13.53	□□□□□ -0.24
PRPF8-212	ENST00000575116	DNAJC25-GNG10	A0A024R161	153 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	POTEB2	H3BUK9	544 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	FIBP	O43427	364 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	STAM2	O75886	525 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	HSPA6	P17066	643 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	MCM7	P33993	719 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	PRPH	P41219	470 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	ATP2C1	P98194	919 aa	Predicted RBP	13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	NBR1	Q14596	966 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116		Q4G0T1	1027 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	ARHGEF16	Q5VV41	709 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	NIPA1	Q7RTP0	329 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	PLEKHH3	Q7Z736	793 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	C4orf32	Q8N8J7	132 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	FAM133A	Q8N9E0	248 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	MPHOSPH6	Q99547	160 aa	Known RBP	13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	PDCD2L	Q9BRP1	358 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.52	□□□□□ -0.25	7e-6	■□□□□ 10.5
PRPF8-212	ENST00000575116	MYH7B	A7E2Y1	1941 aa		13.52	□□□□□ -0.25
PRPF8-212	ENST00000575116	SLC15A5	A6NIM6	579 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	WNT7A	O00755	349 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	TBX3	O15119	743 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	NEMF	O60524	1076 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	PRPF40A	O75400	957 aa	Known RBP	13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	PTPRE	P23469	700 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	ZNF76	P36508	570 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	C1QTNF8	P60827	252 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	PTGDR	Q13258	359 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	PGM5	Q15124	567 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	NFKBIB	Q15653	356 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	WDR78	Q5VTH9	848 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	GPR142	Q7Z601	462 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	VSIG10L	Q86VR7	867 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	FERMT2	Q96AC1	680 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	GDPD2	Q9HCC8	539 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	LMBRD1	Q9NUN5	540 aa		13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	DDX25	Q9UHL0	483 aa	Known RBP	13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	SRPRB	Q9Y5M8	271 aa	Known RBP	13.51	□□□□□ -0.25
PRPF8-212	ENST00000575116	THSD7B	Q9C0I4	1608 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	MAFG	O15525	162 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	CUTA	O60888	179 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	NR3C2	P08235	984 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	CCND2	P30279	289 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	CNTN2	Q02246	1040 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	GRB14	Q14449	540 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	CEP55	Q53EZ4	464 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	ADAL	Q6DHV7	355 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	KRI1	Q8N9T8	703 aa	Known RBP	13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	MTMR9	Q96QG7	549 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	MXRA8	Q9BRK3	442 aa		13.5	□□□□□ -0.25
PRPF8-212	ENST00000575116	R3HDML	Q9H3Y0	253 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms