RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 CYTH3O43739 400 aa19.23■□□□□ 0.67
TMEM88-202ENST00000574668 ADAMTS4O75173 837 aa19.23■□□□□ 0.67
TMEM88-202ENST00000574668 AKR1A1P14550 325 aa19.23■□□□□ 0.67
TMEM88-202ENST00000574668 TRAF1Q13077 416 aa19.23■□□□□ 0.67
TMEM88-202ENST00000574668 SLC35G1Q2M3R5 365 aa19.23■□□□□ 0.67
TMEM88-202ENST00000574668 CHST13Q8NET6 341 aa19.23■□□□□ 0.67
TMEM88-202ENST00000574668 MTMR8Q96EF0 704 aa19.23■□□□□ 0.67
TMEM88-202ENST00000574668 TRERF1Q96PN7 1200 aa19.23■□□□□ 0.67
TMEM88-202ENST00000574668 HOMER2Q9NSB8 354 aa19.23■□□□□ 0.67
TMEM88-202ENST00000574668 FBXO40Q9UH90 709 aa19.23■□□□□ 0.67
TMEM88-202ENST00000574668 CDH23Q9H251 3354 aa19.23■□□□□ 0.67
TMEM88-202ENST00000574668 PFKFB2O60825 505 aa19.22■□□□□ 0.67
TMEM88-202ENST00000574668 IRX5P78411 483 aaPredicted RBP19.22■□□□□ 0.67
TMEM88-202ENST00000574668 SMAD3P84022 425 aaKnown RBP19.22■□□□□ 0.67
TMEM88-202ENST00000574668 AKAP17AQ02040 695 aaKnown RBP19.22■□□□□ 0.67
TMEM88-202ENST00000574668 USH1GQ495M9 461 aa19.22■□□□□ 0.67
TMEM88-202ENST00000574668 MYLIPQ8WY64 445 aa19.22■□□□□ 0.67
TMEM88-202ENST00000574668 ZSCAN31Q96LW9 406 aaPredicted RBP19.22■□□□□ 0.67
TMEM88-202ENST00000574668 AMNQ9BXJ7 453 aa19.22■□□□□ 0.67
TMEM88-202ENST00000574668 NCOA5Q9HCD5 579 aaKnown RBP19.22■□□□□ 0.67
TMEM88-202ENST00000574668 RNF146Q9NTX7 359 aa19.22■□□□□ 0.67
TMEM88-202ENST00000574668 CNPY2Q9Y2B0 182 aa19.22■□□□□ 0.67
TMEM88-202ENST00000574668 PLXNA1Q9UIW2 1896 aa19.22■□□□□ 0.67
TMEM88-202ENST00000574668 SYNRGQ9UMZ2 1314 aa19.22■□□□□ 0.67
TMEM88-202ENST00000574668 SMCHD1A6NHR9 2005 aa19.22■□□□□ 0.67
TMEM88-202ENST00000574668 CUL9Q8IWT3 2517 aa19.21■□□□□ 0.67
TMEM88-202ENST00000574668 SNAI1O95863 264 aaPredicted RBP19.21■□□□□ 0.67
TMEM88-202ENST00000574668 ME3Q16798 604 aa19.21■□□□□ 0.67
TMEM88-202ENST00000574668 ACAD9Q9H845 621 aa19.21■□□□□ 0.67
TMEM88-202ENST00000574668 ABCB11O95342 1321 aa19.21■□□□□ 0.67
TMEM88-202ENST00000574668 CNTNAP5Q8WYK1 1306 aa19.21■□□□□ 0.67
TMEM88-202ENST00000574668 MYADML2A6NDP7 307 aa19.2■□□□□ 0.66
TMEM88-202ENST00000574668 KIAA0355O15063 1070 aa19.2■□□□□ 0.66
TMEM88-202ENST00000574668 RAG1P15918 1043 aa19.2■□□□□ 0.66
TMEM88-202ENST00000574668 MCM2P49736 904 aa19.2■□□□□ 0.66
TMEM88-202ENST00000574668 ACLYP53396 1101 aa19.2■□□□□ 0.66
TMEM88-202ENST00000574668 SCRN1Q12765 414 aa19.2■□□□□ 0.66
TMEM88-202ENST00000574668 MAFAQ8NHW3 353 aaPredicted RBP19.2■□□□□ 0.66
TMEM88-202ENST00000574668 DDX11Q96FC9 970 aa19.2■□□□□ 0.66
TMEM88-202ENST00000574668 RNPC3Q96LT9 517 aaKnown RBP19.2■□□□□ 0.66
TMEM88-202ENST00000574668 TMEM39AQ9NV64 488 aa19.2■□□□□ 0.66
TMEM88-202ENST00000574668 ZHX1Q9UKY1 873 aaPredicted RBP19.2■□□□□ 0.66
TMEM88-202ENST00000574668 MRPL11Q9Y3B7 192 aaKnown RBP19.2■□□□□ 0.66
TMEM88-202ENST00000574668 V9GY48 417 aaPredicted RBP19.2■□□□□ 0.66
TMEM88-202ENST00000574668 BAZ2BQ9UIF8 2168 aaKnown RBP19.2■□□□□ 0.66
TMEM88-202ENST00000574668 VCANP13611 3396 aa19.19■□□□□ 0.66
TMEM88-202ENST00000574668 hCG_1642624A0A1W2PR95 340 aa19.19■□□□□ 0.66
TMEM88-202ENST00000574668 CDKL5O76039 1030 aa19.19■□□□□ 0.66
TMEM88-202ENST00000574668 IFNAR1P17181 557 aa19.19■□□□□ 0.66
TMEM88-202ENST00000574668 SSRP1Q08945 709 aaKnown RBP19.19■□□□□ 0.66
TMEM88-202ENST00000574668 FAAP100Q0VG06 881 aa19.19■□□□□ 0.66
TMEM88-202ENST00000574668 TRIM22Q8IYM9 498 aa19.19■□□□□ 0.66
TMEM88-202ENST00000574668 ANKRD35Q8N283 1001 aa19.19■□□□□ 0.66
TMEM88-202ENST00000574668 NECAB1Q8N987 351 aa19.19■□□□□ 0.66
TMEM88-202ENST00000574668 SLC26A6Q9BXS9 759 aa19.19■□□□□ 0.66
TMEM88-202ENST00000574668 STARD7Q9NQZ5 370 aa19.19■□□□□ 0.66
TMEM88-202ENST00000574668 SH2B1Q9NRF2 756 aaPredicted RBP19.19■□□□□ 0.66
TMEM88-202ENST00000574668 PCDHA1Q9Y5I3 950 aa19.19■□□□□ 0.66
TMEM88-202ENST00000574668 DNAJC25-GNG10A0A024R161 153 aa19.18■□□□□ 0.66
TMEM88-202ENST00000574668 ADCY6O43306 1168 aa19.18■□□□□ 0.66
TMEM88-202ENST00000574668 PRPF3O43395 683 aaKnown RBP19.18■□□□□ 0.66
TMEM88-202ENST00000574668 LARGE1O95461 756 aa19.18■□□□□ 0.66
TMEM88-202ENST00000574668 FPGSQ05932 587 aa19.18■□□□□ 0.66
TMEM88-202ENST00000574668 FUT2Q10981 343 aa19.18■□□□□ 0.66
TMEM88-202ENST00000574668 KCNA10Q16322 511 aa19.18■□□□□ 0.66
TMEM88-202ENST00000574668 MUM1L1Q5H9M0 696 aa19.18■□□□□ 0.66
TMEM88-202ENST00000574668 CCSAPQ6IQ19 270 aaPredicted RBP19.18■□□□□ 0.66
TMEM88-202ENST00000574668 NSMFQ6X4W1 530 aa19.18■□□□□ 0.66
TMEM88-202ENST00000574668 KLHDC9Q8NEP7 349 aa19.18■□□□□ 0.66
TMEM88-202ENST00000574668 PHKBQ93100 1093 aa19.18■□□□□ 0.66
TMEM88-202ENST00000574668 GTF3C6Q969F1 213 aa19.18■□□□□ 0.66
TMEM88-202ENST00000574668 FAM184BQ9ULE4 1060 aa19.18■□□□□ 0.66
TMEM88-202ENST00000574668 SYNGAP1Q96PV0 1343 aa19.18■□□□□ 0.66
TMEM88-202ENST00000574668 NTRK3Q16288 839 aa19.17■□□□□ 0.66
TMEM88-202ENST00000574668 MAMDC4Q6UXC1 1216 aa19.17■□□□□ 0.66
TMEM88-202ENST00000574668 ANKRD33Q7Z3H0 272 aa19.17■□□□□ 0.66
TMEM88-202ENST00000574668 HEATR3Q7Z4Q2 680 aa19.17■□□□□ 0.66
TMEM88-202ENST00000574668 MCF2L2Q86YR7 1114 aa19.17■□□□□ 0.66
TMEM88-202ENST00000574668 MSL3Q8N5Y2 521 aaKnown RBP19.17■□□□□ 0.66
TMEM88-202ENST00000574668 FGD4Q96M96 766 aa19.17■□□□□ 0.66
TMEM88-202ENST00000574668 TSEN34Q9BSV6 310 aaKnown RBP19.17■□□□□ 0.66
TMEM88-202ENST00000574668 RNF26Q9BY78 433 aaPredicted RBP19.17■□□□□ 0.66
TMEM88-202ENST00000574668 PPP1R11O60927 126 aaPredicted RBP19.16■□□□□ 0.66
TMEM88-202ENST00000574668 PPFIA3O75145 1194 aa19.16■□□□□ 0.66
TMEM88-202ENST00000574668 FOSL2P15408 326 aa19.16■□□□□ 0.66
TMEM88-202ENST00000574668 CCDC83Q8IWF9 413 aa19.16■□□□□ 0.66
TMEM88-202ENST00000574668 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.16■□□□□ 0.66
TMEM88-202ENST00000574668 SPTBN5Q9NRC6 3674 aaKnown RBP19.15■□□□□ 0.66
TMEM88-202ENST00000574668 PTPDC1A2A3K4 754 aa19.15■□□□□ 0.66
TMEM88-202ENST00000574668 MOXD2PA6NHM9 499 aa19.15■□□□□ 0.66
TMEM88-202ENST00000574668 DCDC2CA8MYV0 355 aa19.15■□□□□ 0.66
TMEM88-202ENST00000574668 NFIBO00712 420 aa19.15■□□□□ 0.66
TMEM88-202ENST00000574668 ACVR2BQ13705 512 aa19.15■□□□□ 0.66
TMEM88-202ENST00000574668 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.15■□□□□ 0.66
TMEM88-202ENST00000574668 CLEC4DQ8WXI8 215 aa19.15■□□□□ 0.66
TMEM88-202ENST00000574668 TOX2Q96NM4 488 aa19.15■□□□□ 0.66
TMEM88-202ENST00000574668 hCG_1984214I3L0E3 225 aa19.14■□□□□ 0.65
TMEM88-202ENST00000574668 DUSP11O75319 330 aaKnown RBP19.14■□□□□ 0.65
TMEM88-202ENST00000574668 C6orf222P0C671 652 aaPredicted RBP19.14■□□□□ 0.65
TMEM88-202ENST00000574668 SCG2P13521 617 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms