RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 FUCA1P04066 466 aa7.4□□□□□ -1.22
CDC27-216ENST00000574304 LTBRP36941 435 aa7.4□□□□□ -1.22
CDC27-216ENST00000574304 ZC3H14Q6PJT7 736 aaKnown RBP7.4□□□□□ -1.22
CDC27-216ENST00000574304 ANKLE2Q86XL3 938 aa7.4□□□□□ -1.22
CDC27-216ENST00000574304 CD320Q9NPF0 282 aa7.4□□□□□ -1.22
CDC27-216ENST00000574304 MARCH2Q9P0N8 246 aa7.4□□□□□ -1.22
CDC27-216ENST00000574304 PFDN2Q9UHV9 154 aa7.4□□□□□ -1.22
CDC27-216ENST00000574304 DBR1Q9UK59 544 aaKnown RBP7.4□□□□□ -1.22
CDC27-216ENST00000574304 TIMM13Q9Y5L4 95 aaPredicted RBP7.4□□□□□ -1.22
CDC27-216ENST00000574304 TRAV20A0A0B4J274 112 aa7.39□□□□□ -1.23
CDC27-216ENST00000574304 DBX1A6NMT0 343 aa7.39□□□□□ -1.23
CDC27-216ENST00000574304 MYO1BO43795 1136 aa7.39□□□□□ -1.23
CDC27-216ENST00000574304 FGFR1P11362 822 aa7.39□□□□□ -1.23
CDC27-216ENST00000574304 RPL11P62913 178 aaKnown RBP7.39□□□□□ -1.23
CDC27-216ENST00000574304 RASA3Q14644 834 aa7.39□□□□□ -1.23
CDC27-216ENST00000574304 LRP10Q7Z4F1 713 aa7.39□□□□□ -1.23
CDC27-216ENST00000574304 NETO2Q8NC67 525 aa7.39□□□□□ -1.23
CDC27-216ENST00000574304 RCBTB1Q8NDN9 531 aa7.39□□□□□ -1.23
CDC27-216ENST00000574304 PLEKHO2Q8TD55 490 aa7.39□□□□□ -1.23
CDC27-216ENST00000574304 DEPDC7Q96QD5 511 aa7.39□□□□□ -1.23
CDC27-216ENST00000574304 DNAJC2Q99543 621 aaKnown RBP7.39□□□□□ -1.23
CDC27-216ENST00000574304 SMG5Q9UPR3 1016 aaKnown RBP7.39□□□□□ -1.23
CDC27-216ENST00000574304 HCFC2Q9Y5Z7 792 aa7.39□□□□□ -1.23
CDC27-216ENST00000574304 PABPC1P11940 636 aaKnown RBP7.38□□□□□ -1.23
CDC27-216ENST00000574304 CDR1P51861 262 aa7.38□□□□□ -1.23
CDC27-216ENST00000574304 EPHB3P54753 998 aa7.38□□□□□ -1.23
CDC27-216ENST00000574304 PRR5P85299 388 aa7.38□□□□□ -1.23
CDC27-216ENST00000574304 SSRP1Q08945 709 aaKnown RBP7.38□□□□□ -1.23
CDC27-216ENST00000574304 YOD1Q5VVQ6 348 aaPredicted RBP7.38□□□□□ -1.23
CDC27-216ENST00000574304 WWC2Q6AWC2 1192 aa7.38□□□□□ -1.23
CDC27-216ENST00000574304 NSMFQ6X4W1 530 aa7.38□□□□□ -1.23
CDC27-216ENST00000574304 TEX2Q8IWB9 1127 aa7.38□□□□□ -1.23
CDC27-216ENST00000574304 MZB1Q8WU39 189 aa7.38□□□□□ -1.23
CDC27-216ENST00000574304 OSBP2Q969R2 916 aa7.38□□□□□ -1.23
CDC27-216ENST00000574304 RXFP1Q9HBX9 757 aa7.38□□□□□ -1.23
CDC27-216ENST00000574304 SNTG2Q9NY99 539 aa7.38□□□□□ -1.23
CDC27-216ENST00000574304 NPFFR2Q9Y5X5 522 aa7.38□□□□□ -1.23
CDC27-216ENST00000574304 FAM221BA6H8Z2 402 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 C22orf46C9J442 243 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 NPIPB6E9PJ23 425 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 N4BP3O15049 544 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 DIAPH1O60610 1272 aaKnown RBP7.37□□□□□ -1.23
CDC27-216ENST00000574304 NTRK1P04629 796 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 LCP1P13796 627 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 BCL6P41182 706 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 GTF2A2P52657 109 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 ZNF200P98182 395 aaPredicted RBP7.37□□□□□ -1.23
CDC27-216ENST00000574304 IFRD2Q12894 506 aaPredicted RBP7.37□□□□□ -1.23
CDC27-216ENST00000574304 KCNA10Q16322 511 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 USP53Q70EK8 1073 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 LDHDQ86WU2 507 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 CILP2Q8IUL8 1156 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 MKL1Q969V6 931 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 SRPK1Q96SB4 655 aaKnown RBP7.37□□□□□ -1.23
CDC27-216ENST00000574304 NUDT5Q9UKK9 219 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 PCDHA2Q9Y5H9 948 aa7.37□□□□□ -1.23
CDC27-216ENST00000574304 ADCY3O60266 1144 aa7.36□□□□□ -1.23
CDC27-216ENST00000574304 FPR2P25090 351 aa7.36□□□□□ -1.23
CDC27-216ENST00000574304 CEP68Q76N32 757 aa7.36□□□□□ -1.23
CDC27-216ENST00000574304 NLRP10Q86W26 655 aa7.36□□□□□ -1.23
CDC27-216ENST00000574304 PEX11GQ96HA9 241 aa7.36□□□□□ -1.23
CDC27-216ENST00000574304 DRC1Q96MC2 740 aa7.36□□□□□ -1.23
CDC27-216ENST00000574304 TOX2Q96NM4 488 aa7.36□□□□□ -1.23
CDC27-216ENST00000574304 FBXL7Q9UJT9 491 aa7.36□□□□□ -1.23
CDC27-216ENST00000574304 NCKAP1LP55160 1127 aa7.35□□□□□ -1.23
CDC27-216ENST00000574304 LINC00310P59036 64 aa7.35□□□□□ -1.23
CDC27-216ENST00000574304 LSAMPQ13449 338 aa7.35□□□□□ -1.23
CDC27-216ENST00000574304 Q8N1Y9 231 aa7.35□□□□□ -1.23
CDC27-216ENST00000574304 ZBTB38Q8NAP3 1195 aaPredicted RBP7.35□□□□□ -1.23
CDC27-216ENST00000574304 TSPAN17Q96FV3 270 aa7.35□□□□□ -1.23
CDC27-216ENST00000574304 TRMT2BQ96GJ1 504 aaKnown RBP7.35□□□□□ -1.23
CDC27-216ENST00000574304 TMEM169Q96HH4 297 aa7.35□□□□□ -1.23
CDC27-216ENST00000574304 CHAMP1Q96JM3 812 aa7.35□□□□□ -1.23
CDC27-216ENST00000574304 SIGLEC10Q96LC7 697 aa7.35□□□□□ -1.23
CDC27-216ENST00000574304 PHF20Q9BVI0 1012 aa7.35□□□□□ -1.23
CDC27-216ENST00000574304 OSBPL2Q9H1P3 480 aa7.35□□□□□ -1.23
CDC27-216ENST00000574304 GPR27Q9NS67 375 aa7.35□□□□□ -1.23
CDC27-216ENST00000574304 PCDHA5Q9Y5H7 936 aa7.35□□□□□ -1.23
CDC27-216ENST00000574304 IRAK3Q9Y616 596 aa7.35□□□□□ -1.23
CDC27-216ENST00000574304 KDM2BQ8NHM5 1336 aa7.34□□□□□ -1.23
CDC27-216ENST00000574304 SLC9A5Q14940 896 aa7.34□□□□□ -1.23
CDC27-216ENST00000574304 NTRK3Q16288 839 aa7.34□□□□□ -1.23
CDC27-216ENST00000574304 DCP2Q8IU60 420 aaKnown RBP7.34□□□□□ -1.23
CDC27-216ENST00000574304 IGDCC3Q8IVU1 814 aa7.34□□□□□ -1.23
CDC27-216ENST00000574304 DCAF4Q8WV16 495 aa7.34□□□□□ -1.23
CDC27-216ENST00000574304 CDC6Q99741 560 aa7.34□□□□□ -1.23
CDC27-216ENST00000574304 CNOT6Q9ULM6 557 aaKnown RBP7.34□□□□□ -1.23
CDC27-216ENST00000574304 PLA2G2DQ9UNK4 145 aa7.34□□□□□ -1.23
CDC27-216ENST00000574304 SIT1Q9Y3P8 196 aa7.34□□□□□ -1.23
CDC27-216ENST00000574304 KCTD3Q9Y597 815 aa7.34□□□□□ -1.23
CDC27-216ENST00000574304 X6R8D5 127 aa7.34□□□□□ -1.23
CDC27-216ENST00000574304 IRS2Q9Y4H2 1338 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 BLACEA4D250 179 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 IRS4O14654 1257 aaPredicted RBP7.33□□□□□ -1.24
CDC27-216ENST00000574304 ZBTB7AO95365 584 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 FAM153BP0C7A2 387 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 FBLN1P23142 703 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 CFPP27918 469 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 JAG1P78504 1218 aa7.33□□□□□ -1.24
CDC27-216ENST00000574304 SSPNQ14714 243 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms