RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 USP17L20D6RJB6 530 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 F5H6K3 240 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 GSCP56915 257 aaPredicted RBP17.9■□□□□ 0.46
USP43-204ENST00000573955 KLRC3Q07444 240 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 USP17L24Q0WX57 530 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 RBM26Q5T8P6 1007 aaKnown RBP17.9■□□□□ 0.46
USP43-204ENST00000573955 USP17L6PQ6QN14 398 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 CABP7Q86V35 215 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 SGSM3Q96HU1 749 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 TRMT1Q9NXH9 659 aaKnown RBP17.9■□□□□ 0.46
USP43-204ENST00000573955 GDAQ9Y2T3 454 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 SH3BP1Q9Y3L3 701 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 PPP1R3GB7ZBB8 358 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 hCG_1984214I3L0E3 225 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 CBFA2T2O43439 604 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 ENTPD3O75355 529 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 PLCG1P19174 1290 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 SEMA3FQ13275 785 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 CDC37Q16543 378 aaPredicted RBP17.9■□□□□ 0.46
USP43-204ENST00000573955 FAM177A1Q8N128 213 aaPredicted RBP17.9■□□□□ 0.46
USP43-204ENST00000573955 ZNF713Q8N859 430 aaPredicted RBP17.9■□□□□ 0.46
USP43-204ENST00000573955 ZNF592Q92610 1267 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 PSMD1Q99460 953 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 PSTPIP2Q9H939 334 aa17.9■□□□□ 0.46
USP43-204ENST00000573955 LAD1O00515 517 aa17.89■□□□□ 0.46
USP43-204ENST00000573955 EDIL3O43854 480 aa17.89■□□□□ 0.46
USP43-204ENST00000573955 RPN1P04843 607 aaKnown RBP17.89■□□□□ 0.46
USP43-204ENST00000573955 PRPHP41219 470 aa17.89■□□□□ 0.46
USP43-204ENST00000573955 GSDMDP57764 484 aa17.89■□□□□ 0.46
USP43-204ENST00000573955 CALCRLQ16602 461 aa17.89■□□□□ 0.46
USP43-204ENST00000573955 USH1GQ495M9 461 aa17.89■□□□□ 0.46
USP43-204ENST00000573955 CUL5Q93034 780 aa17.89■□□□□ 0.46
USP43-204ENST00000573955 PYM1Q9BRP8 204 aaKnown RBP17.89■□□□□ 0.46
USP43-204ENST00000573955 RIC8AQ9NPQ8 531 aa17.89■□□□□ 0.46
USP43-204ENST00000573955 IMPACTQ9P2X3 320 aa17.89■□□□□ 0.46
USP43-204ENST00000573955 ZNF70Q9UC06 446 aaPredicted RBP17.89■□□□□ 0.46
USP43-204ENST00000573955 PCDHA1Q9Y5I3 950 aa17.89■□□□□ 0.46
USP43-204ENST00000573955 NDUFB10O96000 172 aa17.89■□□□□ 0.45
USP43-204ENST00000573955 ZNF18P17022 549 aa17.89■□□□□ 0.45
USP43-204ENST00000573955 SFPQP23246 707 aaKnown RBP eCLIP17.89■□□□□ 0.45
USP43-204ENST00000573955 ERCC5P28715 1186 aaPredicted RBP17.89■□□□□ 0.45
USP43-204ENST00000573955 TPD52L1Q16890 204 aaPredicted RBP17.89■□□□□ 0.45
USP43-204ENST00000573955 MIGA2Q7L4E1 593 aa17.89■□□□□ 0.45
USP43-204ENST00000573955 HDAC9Q9UKV0 1011 aa17.89■□□□□ 0.45
USP43-204ENST00000573955 A0A1W2PRG0 241 aa17.88■□□□□ 0.45
USP43-204ENST00000573955 NFKBIEO00221 500 aa17.88■□□□□ 0.45
USP43-204ENST00000573955 EGFRP00533 1210 aa17.88■□□□□ 0.45
USP43-204ENST00000573955 VIL1P09327 827 aaKnown RBP17.88■□□□□ 0.45
USP43-204ENST00000573955 ECE1P42892 770 aa17.88■□□□□ 0.45
USP43-204ENST00000573955 PRELPP51888 382 aa17.88■□□□□ 0.45
USP43-204ENST00000573955 PACS2Q86VP3 889 aa17.88■□□□□ 0.45
USP43-204ENST00000573955 NIM1KQ8IY84 436 aa17.88■□□□□ 0.45
USP43-204ENST00000573955 MKL1Q969V6 931 aa17.88■□□□□ 0.45
USP43-204ENST00000573955 TMEM39BQ9GZU3 492 aa17.88■□□□□ 0.45
USP43-204ENST00000573955 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.88■□□□□ 0.45
USP43-204ENST00000573955 V9GYY5 206 aaPredicted RBP17.88■□□□□ 0.45
USP43-204ENST00000573955 NPM3O75607 178 aaKnown RBP17.88■□□□□ 0.45
USP43-204ENST00000573955 ELF2Q15723 593 aa17.88■□□□□ 0.45
USP43-204ENST00000573955 DCAF4Q8WV16 495 aa17.88■□□□□ 0.45
USP43-204ENST00000573955 ZNF215Q9UL58 517 aaPredicted RBP17.88■□□□□ 0.45
USP43-204ENST00000573955 ATRNL1Q5VV63 1379 aa17.88■□□□□ 0.45
USP43-204ENST00000573955 POTEMA6NI47 508 aa17.87■□□□□ 0.45
USP43-204ENST00000573955 PTGER2P43116 358 aa17.87■□□□□ 0.45
USP43-204ENST00000573955 CCDC125Q86Z20 511 aa17.87■□□□□ 0.45
USP43-204ENST00000573955 GMLQ99445 158 aa17.87■□□□□ 0.45
USP43-204ENST00000573955 CCSER1Q9C0I3 900 aa17.87■□□□□ 0.45
USP43-204ENST00000573955 CCDC189A1A4V9 331 aa17.87■□□□□ 0.45
USP43-204ENST00000573955 MRPL12P52815 198 aaKnown RBP17.87■□□□□ 0.45
USP43-204ENST00000573955 CXCL9Q07325 125 aa17.87■□□□□ 0.45
USP43-204ENST00000573955 ZYXQ15942 572 aaKnown RBP17.87■□□□□ 0.45
USP43-204ENST00000573955 SPATA1Q5VX52 437 aa17.87■□□□□ 0.45
USP43-204ENST00000573955 VSTM4Q8IW00 320 aa17.87■□□□□ 0.45
USP43-204ENST00000573955 MTMR8Q96EF0 704 aa17.86■□□□□ 0.45
USP43-204ENST00000573955 ERO1AQ96HE7 468 aa17.86■□□□□ 0.45
USP43-204ENST00000573955 ZNRF3Q9ULT6 936 aa17.86■□□□□ 0.45
USP43-204ENST00000573955 POLR3GO15318 223 aaPredicted RBP17.86■□□□□ 0.45
USP43-204ENST00000573955 MAGEA9P43362 315 aa17.86■□□□□ 0.45
USP43-204ENST00000573955 SWT1Q5T5J6 900 aaKnown RBP17.86■□□□□ 0.45
USP43-204ENST00000573955 LRCH2Q5VUJ6 765 aa17.86■□□□□ 0.45
USP43-204ENST00000573955 CCDC150Q8NCX0 1101 aa17.86■□□□□ 0.45
USP43-204ENST00000573955 ACER1Q8TDN7 264 aa17.86■□□□□ 0.45
USP43-204ENST00000573955 FAM212AQ96EL1 285 aa17.86■□□□□ 0.45
USP43-204ENST00000573955 SGIP1Q9BQI5 828 aa17.86■□□□□ 0.45
USP43-204ENST00000573955 MMTAG2Q9BU76 263 aaKnown RBP17.86■□□□□ 0.45
USP43-204ENST00000573955 MARCH6O60337 910 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 PRCPP42785 496 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 PPP1R18Q6NYC8 613 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 CCDC84Q86UT8 332 aaPredicted RBP17.85■□□□□ 0.45
USP43-204ENST00000573955 GOLGA5Q8TBA6 731 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 MTMR9Q96QG7 549 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 TAOK3Q9H2K8 898 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 LRWD1Q9UFC0 647 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 CLK2P49760 499 aaKnown RBP17.85■□□□□ 0.45
USP43-204ENST00000573955 NBPF9Q3BBW0 867 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 ZNF658Q5TYW1 1059 aaPredicted RBP17.85■□□□□ 0.45
USP43-204ENST00000573955 NELFBQ8WX92 580 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 DDX25Q9UHL0 483 aaKnown RBP17.85■□□□□ 0.45
USP43-204ENST00000573955 FHOD1Q9Y613 1164 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 TRIM49BA6NDI0 452 aa17.85■□□□□ 0.45
USP43-204ENST00000573955 TEX33O43247 280 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms