RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 PARP1P09874 1014 aaKnown RBP16.7■□□□□ 0.26
TVP23A-208ENST00000573857 GRIN2CQ14957 1233 aa16.7■□□□□ 0.26
TVP23A-208ENST00000573857 QRICH1Q2TAL8 776 aa16.7■□□□□ 0.26
TVP23A-208ENST00000573857 BRDTQ58F21 947 aaPredicted RBP16.7■□□□□ 0.26
TVP23A-208ENST00000573857 TTC22Q5TAA0 569 aa16.7■□□□□ 0.26
TVP23A-208ENST00000573857 SYTL5Q8TDW5 730 aaPredicted RBP16.7■□□□□ 0.26
TVP23A-208ENST00000573857 COPS5Q92905 334 aa16.7■□□□□ 0.26
TVP23A-208ENST00000573857 PBX4Q9BYU1 374 aa16.7■□□□□ 0.26
TVP23A-208ENST00000573857 ZNF576Q9H609 170 aa16.7■□□□□ 0.26
TVP23A-208ENST00000573857 JMJD4Q9H9V9 463 aa16.7■□□□□ 0.26
TVP23A-208ENST00000573857 GPHNQ9NQX3 736 aaPredicted RBP16.7■□□□□ 0.26
TVP23A-208ENST00000573857 TRMT13Q9NUP7 481 aaKnown RBP16.7■□□□□ 0.26
TVP23A-208ENST00000573857 SPTBN5Q9NRC6 3674 aaKnown RBP16.7■□□□□ 0.26
TVP23A-208ENST00000573857 A6NJR5 290 aa16.69■□□□□ 0.26
TVP23A-208ENST00000573857 DHX16O60231 1041 aaKnown RBP16.69■□□□□ 0.26
TVP23A-208ENST00000573857 ARIH2O95376 493 aa16.69■□□□□ 0.26
TVP23A-208ENST00000573857 FGBP02675 491 aa16.69■□□□□ 0.26
TVP23A-208ENST00000573857 SUPT20HL2P0C7V6 817 aa16.69■□□□□ 0.26
TVP23A-208ENST00000573857 TXNP10599 105 aaKnown RBP16.69■□□□□ 0.26
TVP23A-208ENST00000573857 PBX2P40425 430 aa16.69■□□□□ 0.26
TVP23A-208ENST00000573857 TTLL4Q14679 1199 aa16.69■□□□□ 0.26
TVP23A-208ENST00000573857 IFIT1BQ5T764 474 aaKnown RBP16.69■□□□□ 0.26
TVP23A-208ENST00000573857 TBC1D5Q92609 795 aa16.69■□□□□ 0.26
TVP23A-208ENST00000573857 MTIF3Q9H2K0 278 aaKnown RBP16.69■□□□□ 0.26
TVP23A-208ENST00000573857 CXXC1Q9P0U4 656 aaPredicted RBP16.69■□□□□ 0.26
TVP23A-208ENST00000573857 COL20A1Q9P218 1284 aa16.69■□□□□ 0.26
TVP23A-208ENST00000573857 KPNA6O60684 536 aa16.68■□□□□ 0.26
TVP23A-208ENST00000573857 CYP2C9P11712 490 aa16.68■□□□□ 0.26
TVP23A-208ENST00000573857 SEC23AQ15436 765 aa16.68■□□□□ 0.26
TVP23A-208ENST00000573857 NBPF20Q3BBV1 942 aa16.68■□□□□ 0.26
TVP23A-208ENST00000573857 CCDC62Q6P9F0 684 aa16.68■□□□□ 0.26
TVP23A-208ENST00000573857 OTOP2Q7RTS6 562 aa16.68■□□□□ 0.26
TVP23A-208ENST00000573857 FBXO11Q86XK2 927 aa16.68■□□□□ 0.26
TVP23A-208ENST00000573857 MCF2L2Q86YR7 1114 aa16.68■□□□□ 0.26
TVP23A-208ENST00000573857 NSUN6Q8TEA1 469 aaKnown RBP16.68■□□□□ 0.26
TVP23A-208ENST00000573857 TAAR1Q96RJ0 339 aa16.68■□□□□ 0.26
TVP23A-208ENST00000573857 VAT1LQ9HCJ6 419 aa16.68■□□□□ 0.26
TVP23A-208ENST00000573857 MRPL11Q9Y3B7 192 aaKnown RBP16.68■□□□□ 0.26
TVP23A-208ENST00000573857 NFRKBQ6P4R8 1299 aa16.67■□□□□ 0.26
TVP23A-208ENST00000573857 CYB5R4Q7L1T6 521 aa16.67■□□□□ 0.26
TVP23A-208ENST00000573857 RPUSD2Q8IZ73 545 aaKnown RBP16.67■□□□□ 0.26
TVP23A-208ENST00000573857 STAG2Q8N3U4 1231 aa16.67■□□□□ 0.26
TVP23A-208ENST00000573857 VWCEQ96DN2 955 aa16.67■□□□□ 0.26
TVP23A-208ENST00000573857 SCLYQ96I15 445 aa16.67■□□□□ 0.26
TVP23A-208ENST00000573857 IWS1Q96ST2 819 aa16.67■□□□□ 0.26
TVP23A-208ENST00000573857 RMDN3Q96TC7 470 aa16.67■□□□□ 0.26
TVP23A-208ENST00000573857 COL25A1Q9BXS0 654 aaPredicted RBP16.67■□□□□ 0.26
TVP23A-208ENST00000573857 SCN10AQ9Y5Y9 1956 aa16.67■□□□□ 0.26
TVP23A-208ENST00000573857 RAB30Q15771 203 aa16.66■□□□□ 0.26
TVP23A-208ENST00000573857 STXBP2Q15833 593 aa16.66■□□□□ 0.26
TVP23A-208ENST00000573857 FAM47CQ5HY64 1035 aa16.66■□□□□ 0.26
TVP23A-208ENST00000573857 MAD2L2Q9UI95 211 aa16.66■□□□□ 0.26
TVP23A-208ENST00000573857 MUC3AQ02505 3323 aa16.66■□□□□ 0.26
TVP23A-208ENST00000573857 KLRF2D3W0D1 207 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 OPLAHO14841 1288 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 PFKMP08237 780 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 CYP21A2P08686 494 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 CHMLP26374 656 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 PTH1RQ03431 593 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 ARHGAP1Q07960 439 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 TRDNQ13061 729 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 LY6KQ17RY6 165 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 ARHGEF16Q5VV41 709 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 SEPT14Q6ZU15 432 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 PPP1R13LQ8WUF5 828 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 AFG1LQ8WV93 481 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 RUFY2Q8WXA3 655 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 MTMR8Q96EF0 704 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 AMNQ9BXJ7 453 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 MSRAQ9UJ68 235 aa16.65■□□□□ 0.26
TVP23A-208ENST00000573857 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
TVP23A-208ENST00000573857 PALM3A6NDB9 673 aaPredicted RBP16.64■□□□□ 0.25
TVP23A-208ENST00000573857 PPP1R11O60927 126 aaPredicted RBP16.64■□□□□ 0.25
TVP23A-208ENST00000573857 CFBP00751 764 aa16.64■□□□□ 0.25
TVP23A-208ENST00000573857 GH1P01241 217 aa16.64■□□□□ 0.25
TVP23A-208ENST00000573857 MMP3P08254 477 aa16.64■□□□□ 0.25
TVP23A-208ENST00000573857 EIF2AK2P19525 551 aaKnown RBP16.64■□□□□ 0.25
TVP23A-208ENST00000573857 HSD17B4P51659 736 aa16.64■□□□□ 0.25
TVP23A-208ENST00000573857 GHRHRQ02643 423 aa16.64■□□□□ 0.25
TVP23A-208ENST00000573857 PTPN11Q06124 597 aaPredicted RBP16.64■□□□□ 0.25
TVP23A-208ENST00000573857 PXMP2Q9NR77 195 aa16.64■□□□□ 0.25
TVP23A-208ENST00000573857 SLC4A7Q9Y6M7 1214 aa16.64■□□□□ 0.25
TVP23A-208ENST00000573857 PITPNM1O00562 1244 aa16.63■□□□□ 0.25
TVP23A-208ENST00000573857 ZBTB5O15062 677 aa16.63■□□□□ 0.25
TVP23A-208ENST00000573857 EIF3JO75822 258 aaKnown RBP16.63■□□□□ 0.25
TVP23A-208ENST00000573857 NR3C2P08235 984 aa16.63■□□□□ 0.25
TVP23A-208ENST00000573857 USP38Q8NB14 1042 aa16.63■□□□□ 0.25
TVP23A-208ENST00000573857 GAS2L1Q99501 681 aaPredicted RBP16.63■□□□□ 0.25
TVP23A-208ENST00000573857 NKX2-4Q9H2Z4 354 aa16.63■□□□□ 0.25
TVP23A-208ENST00000573857 PRDM12Q9H4Q4 367 aa16.63■□□□□ 0.25
TVP23A-208ENST00000573857 YBX2Q9Y2T7 364 aaKnown RBP16.63■□□□□ 0.25
TVP23A-208ENST00000573857 PCDHA1Q9Y5I3 950 aa16.63■□□□□ 0.25
TVP23A-208ENST00000573857 TAF6LQ9Y6J9 622 aa16.63■□□□□ 0.25
TVP23A-208ENST00000573857 ZBBXA8MT70 800 aa16.62■□□□□ 0.25
TVP23A-208ENST00000573857 IFIT3O14879 490 aaKnown RBP16.62■□□□□ 0.25
TVP23A-208ENST00000573857 GRM4Q14833 912 aa16.62■□□□□ 0.25
TVP23A-208ENST00000573857 SLC35G1Q2M3R5 365 aa16.62■□□□□ 0.25
TVP23A-208ENST00000573857 CHST3Q7LGC8 479 aa16.62■□□□□ 0.25
TVP23A-208ENST00000573857 DEFB128Q7Z7B8 93 aa16.62■□□□□ 0.25
TVP23A-208ENST00000573857 SLC28A3Q9HAS3 691 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms