RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 MBD1Q9UIS9 605 aaPredicted RBP7.14□□□□□ -1.27
CDC27-215ENST00000573550 ETV2O00321 342 aaPredicted RBP7.13□□□□□ -1.27
CDC27-215ENST00000573550 ABLIM1O14639 778 aa7.13□□□□□ -1.27
CDC27-215ENST00000573550 DIAPH1O60610 1272 aaKnown RBP7.13□□□□□ -1.27
CDC27-215ENST00000573550 FGFR1P11362 822 aa7.13□□□□□ -1.27
CDC27-215ENST00000573550 SRSF3P84103 164 aaKnown RBP7.13□□□□□ -1.27
CDC27-215ENST00000573550 NR1I3Q14994 352 aa7.13□□□□□ -1.27
CDC27-215ENST00000573550 YOD1Q5VVQ6 348 aaPredicted RBP7.13□□□□□ -1.27
CDC27-215ENST00000573550 PLEKHO2Q8TD55 490 aa7.13□□□□□ -1.27
CDC27-215ENST00000573550 KCTD13Q8WZ19 329 aa7.13□□□□□ -1.27
CDC27-215ENST00000573550 DIO2Q92813 273 aa7.13□□□□□ -1.27
CDC27-215ENST00000573550 OSBP2Q969R2 916 aa7.13□□□□□ -1.27
CDC27-215ENST00000573550 SPATA9Q9BWV2 254 aa7.13□□□□□ -1.27
CDC27-215ENST00000573550 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.13□□□□□ -1.276e-7■■■□□ 18.1
CDC27-215ENST00000573550 PFDN2Q9UHV9 154 aa7.13□□□□□ -1.27
CDC27-215ENST00000573550 NPFFR2Q9Y5X5 522 aa7.13□□□□□ -1.27
CDC27-215ENST00000573550 A0A1W2PQJ5 194 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 C1QTNF9P0C862 333 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 LTBRP36941 435 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 MAPKAPK2P49137 400 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 TMEM62Q0P6H9 643 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 OLFML2BQ68BL8 750 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 TMC6Q7Z403 805 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 CILP2Q8IUL8 1156 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 Q8N1Y9 231 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 RCBTB1Q8NDN9 531 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 MKL1Q969V6 931 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 SGPP1Q9BX95 441 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 CNTD2Q9H8S5 307 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 MARCH2Q9P0N8 246 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 FBXL7Q9UJT9 491 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 HCFC2Q9Y5Z7 792 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 KIF21BO75037 1637 aa7.12□□□□□ -1.27
CDC27-215ENST00000573550 TRAV20A0A0B4J274 112 aa7.11□□□□□ -1.27
CDC27-215ENST00000573550 PRODHO43272 600 aa7.11□□□□□ -1.27
CDC27-215ENST00000573550 FUCA1P04066 466 aa7.11□□□□□ -1.27
CDC27-215ENST00000573550 PABPC1P11940 636 aaKnown RBP7.11□□□□□ -1.27
CDC27-215ENST00000573550 LCP1P13796 627 aa7.11□□□□□ -1.27
CDC27-215ENST00000573550 DLG4P78352 724 aa7.11□□□□□ -1.27
CDC27-215ENST00000573550 RBM10P98175 930 aaKnown RBP7.11□□□□□ -1.27
CDC27-215ENST00000573550 SSRP1Q08945 709 aaKnown RBP7.11□□□□□ -1.27
CDC27-215ENST00000573550 PKN1Q16512 942 aa7.11□□□□□ -1.27
CDC27-215ENST00000573550 WWC2Q6AWC2 1192 aa7.11□□□□□ -1.27
CDC27-215ENST00000573550 ATG14Q6ZNE5 492 aa7.11□□□□□ -1.27
CDC27-215ENST00000573550 NLRP10Q86W26 655 aa7.11□□□□□ -1.27
CDC27-215ENST00000573550 NETO2Q8NC67 525 aa7.11□□□□□ -1.27
CDC27-215ENST00000573550 KCNN1Q92952 543 aa7.11□□□□□ -1.27
CDC27-215ENST00000573550 DRC1Q96MC2 740 aa7.11□□□□□ -1.27
CDC27-215ENST00000573550 CD320Q9NPF0 282 aa7.11□□□□□ -1.27
CDC27-215ENST00000573550 ZC3H12DA2A288 527 aaKnown RBP7.1□□□□□ -1.27
CDC27-215ENST00000573550 NFIBO00712 420 aa7.1□□□□□ -1.27
CDC27-215ENST00000573550 TMEM253P0C7T8 217 aa7.1□□□□□ -1.27
CDC27-215ENST00000573550 RPL11P62913 178 aaKnown RBP7.1□□□□□ -1.27
CDC27-215ENST00000573550 NTRK3Q16288 839 aa7.1□□□□□ -1.27
CDC27-215ENST00000573550 ZC3H14Q6PJT7 736 aaKnown RBP7.1□□□□□ -1.27
CDC27-215ENST00000573550 NSMFQ6X4W1 530 aa7.1□□□□□ -1.27
CDC27-215ENST00000573550 CABP7Q86V35 215 aa7.1□□□□□ -1.27
CDC27-215ENST00000573550 TEX2Q8IWB9 1127 aa7.1□□□□□ -1.27
CDC27-215ENST00000573550 UBXN4Q92575 508 aa7.1□□□□□ -1.27
CDC27-215ENST00000573550 SRPK1Q96SB4 655 aaKnown RBP7.1□□□□□ -1.27
CDC27-215ENST00000573550 OSBPL2Q9H1P3 480 aa7.1□□□□□ -1.27
CDC27-215ENST00000573550 SIRT5Q9NXA8 310 aa7.1□□□□□ -1.27
CDC27-215ENST00000573550 BTG4Q9NY30 223 aa7.1□□□□□ -1.27
CDC27-215ENST00000573550 PLA2G2DQ9UNK4 145 aa7.1□□□□□ -1.27
CDC27-215ENST00000573550 TIMM13Q9Y5L4 95 aaPredicted RBP7.1□□□□□ -1.27
CDC27-215ENST00000573550 TNIKQ9UKE5 1360 aa7.09□□□□□ -1.27
CDC27-215ENST00000573550 ABCC8Q09428 1581 aa7.09□□□□□ -1.27
CDC27-215ENST00000573550 F8W031 263 aaPredicted RBP7.09□□□□□ -1.27
CDC27-215ENST00000573550 NTRK1P04629 796 aa7.09□□□□□ -1.27
CDC27-215ENST00000573550 FPR2P25090 351 aa7.09□□□□□ -1.27
CDC27-215ENST00000573550 BCL6P41182 706 aa7.09□□□□□ -1.27
CDC27-215ENST00000573550 RAP1GAPP47736 663 aa7.09□□□□□ -1.27
CDC27-215ENST00000573550 CDR1P51861 262 aa7.09□□□□□ -1.27
CDC27-215ENST00000573550 EPHB3P54753 998 aa7.09□□□□□ -1.27
CDC27-215ENST00000573550 IFRD2Q12894 506 aaPredicted RBP7.09□□□□□ -1.27
CDC27-215ENST00000573550 FOXB2Q5VYV0 432 aa7.09□□□□□ -1.27
CDC27-215ENST00000573550 TMEM132EQ6IEE7 984 aa7.09□□□□□ -1.27
CDC27-215ENST00000573550 USP53Q70EK8 1073 aa7.09□□□□□ -1.27
CDC27-215ENST00000573550 ZBTB38Q8NAP3 1195 aaPredicted RBP7.09□□□□□ -1.27
CDC27-215ENST00000573550 USP33Q8TEY7 942 aa7.09□□□□□ -1.27
CDC27-215ENST00000573550 RXFP1Q9HBX9 757 aa7.09□□□□□ -1.27
CDC27-215ENST00000573550 KDM2BQ8NHM5 1336 aa7.08□□□□□ -1.28
CDC27-215ENST00000573550 C22orf46C9J442 243 aa7.08□□□□□ -1.28
CDC27-215ENST00000573550 MYO1BO43795 1136 aa7.08□□□□□ -1.28
CDC27-215ENST00000573550 FBLN1P23142 703 aa7.08□□□□□ -1.28
CDC27-215ENST00000573550 GTF2A2P52657 109 aa7.08□□□□□ -1.28
CDC27-215ENST00000573550 PRR5P85299 388 aa7.08□□□□□ -1.28
CDC27-215ENST00000573550 ZNF200P98182 395 aaPredicted RBP7.08□□□□□ -1.28
CDC27-215ENST00000573550 DNAJC7Q99615 494 aa7.08□□□□□ -1.28
CDC27-215ENST00000573550 GPR27Q9NS67 375 aa7.08□□□□□ -1.28
CDC27-215ENST00000573550 PCDHA5Q9Y5H7 936 aa7.08□□□□□ -1.28
CDC27-215ENST00000573550 PCDHA2Q9Y5H9 948 aa7.08□□□□□ -1.28
CDC27-215ENST00000573550 IRS2Q9Y4H2 1338 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 GOLGA3Q08378 1498 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 BAZ1BQ9UIG0 1483 aaKnown RBP7.07□□□□□ -1.28
CDC27-215ENST00000573550 TCAF2A6NFQ2 919 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 N4BP3O15049 544 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 MSCO60682 206 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 FAM153BP0C7A2 387 aa7.07□□□□□ -1.28
CDC27-215ENST00000573550 YBX3P16989 372 aaKnown RBP eCLIP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms