RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 VCAM1P19320 739 aa15.67■□□□□ 0.1
TVP23A-207ENST00000573360 NCAPH2Q6IBW4 605 aa15.67■□□□□ 0.1
TVP23A-207ENST00000573360 IQUBQ8NA54 791 aa15.67■□□□□ 0.1
TVP23A-207ENST00000573360 SNX29Q8TEQ0 813 aa15.67■□□□□ 0.1
TVP23A-207ENST00000573360 BMP2KQ9NSY1 1161 aaPredicted RBP15.67■□□□□ 0.1
TVP23A-207ENST00000573360 TRAF5O00463 557 aa15.67■□□□□ 0.1
TVP23A-207ENST00000573360 NFIBO00712 420 aa15.67■□□□□ 0.1
TVP23A-207ENST00000573360 NPM3O75607 178 aaKnown RBP15.67■□□□□ 0.1
TVP23A-207ENST00000573360 BMP15O95972 392 aa15.67■□□□□ 0.1
TVP23A-207ENST00000573360 SFPQP23246 707 aaKnown RBP eCLIP15.67■□□□□ 0.1
TVP23A-207ENST00000573360 GTF2F1P35269 517 aaKnown RBP eCLIP15.67■□□□□ 0.1
TVP23A-207ENST00000573360 SUPT20HL1Q3ZLR7 823 aa15.67■□□□□ 0.1
TVP23A-207ENST00000573360 RIC8AQ9NPQ8 531 aa15.67■□□□□ 0.1
TVP23A-207ENST00000573360 PAXBP1Q9Y5B6 917 aa15.67■□□□□ 0.1
TVP23A-207ENST00000573360 PHF20L1A8MW92 1017 aa15.66■□□□□ 0.1
TVP23A-207ENST00000573360 EIF2AK2P19525 551 aaKnown RBP15.66■□□□□ 0.1
TVP23A-207ENST00000573360 EPHX2P34913 555 aa15.66■□□□□ 0.1
TVP23A-207ENST00000573360 TMEM266Q2M3C6 531 aa15.66■□□□□ 0.1
TVP23A-207ENST00000573360 ZNF771Q7L3S4 317 aaPredicted RBP15.66■□□□□ 0.1
TVP23A-207ENST00000573360 MTMR14Q8NCE2 650 aa15.66■□□□□ 0.1
TVP23A-207ENST00000573360 XPO4Q9C0E2 1151 aaKnown RBP15.66■□□□□ 0.1
TVP23A-207ENST00000573360 FKBP1CQ5VVH2 108 aa15.66■□□□□ 0.1
TVP23A-207ENST00000573360 SMAP1Q8IYB5 467 aaPredicted RBP15.66■□□□□ 0.1
TVP23A-207ENST00000573360 HPS3Q969F9 1004 aa15.66■□□□□ 0.1
TVP23A-207ENST00000573360 ADARB2Q9NS39 739 aaKnown RBP15.66■□□□□ 0.1
TVP23A-207ENST00000573360 PCDHA12Q9UN75 941 aa15.66■□□□□ 0.1
TVP23A-207ENST00000573360 CTNND1O60716 968 aaKnown RBP15.66■□□□□ 0.1
TVP23A-207ENST00000573360 ARHGAP4P98171 946 aa15.66■□□□□ 0.1
TVP23A-207ENST00000573360 CUL4BQ13620 913 aa15.66■□□□□ 0.1
TVP23A-207ENST00000573360 RBM43Q6ZSC3 357 aaKnown RBP15.66■□□□□ 0.1
TVP23A-207ENST00000573360 GMCL1Q96IK5 515 aa15.66■□□□□ 0.1
TVP23A-207ENST00000573360 ZBED3Q96IU2 234 aaPredicted RBP15.66■□□□□ 0.1
TVP23A-207ENST00000573360 TMOD4Q9NZQ9 345 aa15.66■□□□□ 0.1
TVP23A-207ENST00000573360 TBC1D7Q9P0N9 293 aa15.66■□□□□ 0.1
TVP23A-207ENST00000573360 PLIN4Q96Q06 1357 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 TRAPPC10P48553 1259 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 NCBP1Q09161 790 aaKnown RBP15.65■□□□□ 0.1
TVP23A-207ENST00000573360 GALNT17Q6IS24 598 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 ZNF280CQ8ND82 737 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 GMCL1P1Q8NEA9 526 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 KIF18AQ8NI77 898 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 P2RX7Q99572 595 aaKnown RBP15.65■□□□□ 0.1
TVP23A-207ENST00000573360 SLF1Q9BQI6 1058 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 TMX1Q9H3N1 280 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 SAMM50Q9Y512 469 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 PLCG1P19174 1290 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 MRFAP1L1Q96HT8 127 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 SH2D3AQ9BRG2 576 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 ZNF215Q9UL58 517 aaPredicted RBP15.65■□□□□ 0.1
TVP23A-207ENST00000573360 PTPRAP18433 802 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 ASIC1P78348 528 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 DHX40Q8IX18 779 aaKnown RBP15.65■□□□□ 0.1
TVP23A-207ENST00000573360 PAGE5Q96GU1 130 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 NUDT12Q9BQG2 462 aa15.65■□□□□ 0.1
TVP23A-207ENST00000573360 GCOM1H8Y6P7 765 aaPredicted RBP15.64■□□□□ 0.09
TVP23A-207ENST00000573360 KRT18P05783 430 aaKnown RBP15.64■□□□□ 0.09
TVP23A-207ENST00000573360 POLR2MP0CAP2 368 aa15.64■□□□□ 0.09
TVP23A-207ENST00000573360 NF2P35240 595 aa15.64■□□□□ 0.09
TVP23A-207ENST00000573360 VGLL4Q14135 290 aa15.64■□□□□ 0.09
TVP23A-207ENST00000573360 SCYL3Q8IZE3 742 aa15.64■□□□□ 0.09
TVP23A-207ENST00000573360 HPSEQ9Y251 543 aa15.64■□□□□ 0.09
TVP23A-207ENST00000573360 ABCB11O95342 1321 aa15.64■□□□□ 0.09
TVP23A-207ENST00000573360 ATP1A3P13637 1013 aa15.64■□□□□ 0.09
TVP23A-207ENST00000573360 NT5C2P49902 561 aa15.64■□□□□ 0.09
TVP23A-207ENST00000573360 PRPF38AQ8NAV1 312 aaKnown RBP15.64■□□□□ 0.09
TVP23A-207ENST00000573360 CALML4Q96GE6 196 aa15.64■□□□□ 0.09
TVP23A-207ENST00000573360 EMILIN3Q9NT22 766 aa15.64■□□□□ 0.09
TVP23A-207ENST00000573360 MEIS2O14770 477 aa15.64■□□□□ 0.09
TVP23A-207ENST00000573360 CCT6AP40227 531 aaKnown RBP15.64■□□□□ 0.09
TVP23A-207ENST00000573360 MYH6P13533 1939 aa15.64■□□□□ 0.09
TVP23A-207ENST00000573360 KRT79Q5XKE5 535 aa15.63■□□□□ 0.09
TVP23A-207ENST00000573360 SYT10Q6XYQ8 523 aa15.63■□□□□ 0.09
TVP23A-207ENST00000573360 MAEAQ7L5Y9 396 aa15.63■□□□□ 0.09
TVP23A-207ENST00000573360 MAN1B1Q9UKM7 699 aa15.63■□□□□ 0.09
TVP23A-207ENST00000573360 LTBP3Q9NS15 1303 aa15.63■□□□□ 0.09
TVP23A-207ENST00000573360 TCEAL9Q9UHQ7 104 aa15.63■□□□□ 0.09
TVP23A-207ENST00000573360 NOVP48745 357 aa15.63■□□□□ 0.09
TVP23A-207ENST00000573360 BACE1P56817 501 aa15.63■□□□□ 0.09
TVP23A-207ENST00000573360 SNRNP48Q6IEG0 339 aaKnown RBP15.63■□□□□ 0.09
TVP23A-207ENST00000573360 EEPD1Q7L9B9 569 aa15.63■□□□□ 0.09
TVP23A-207ENST00000573360 TESPA1A2RU30 521 aaPredicted RBP15.62■□□□□ 0.09
TVP23A-207ENST00000573360 GOLGA8FQ08AF8 430 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 GOLGA8DPQ0D2H9 430 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 MCM6Q14566 821 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 KLRG1Q96E93 195 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 GDAQ9Y2T3 454 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 RGPD3A6NKT7 1758 aaPredicted RBP15.62■□□□□ 0.09
TVP23A-207ENST00000573360 RGPD4Q7Z3J3 1758 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 M0R2N6 131 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 ACTN4O43707 911 aaKnown RBP15.62■□□□□ 0.09
TVP23A-207ENST00000573360 ZBED4O75132 1171 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 SLFN14P0C7P3 912 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 NLRP12P59046 1061 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 ELF2Q15723 593 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 MUM1L1Q5H9M0 696 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 GSDMDP57764 484 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 AS3MTQ9HBK9 375 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 FEM1BQ9UK73 627 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 RIPK3Q9Y572 518 aa15.62■□□□□ 0.09
TVP23A-207ENST00000573360 FANCLQ9NW38 375 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms