RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 SESTD1Q86VW0 696 aa12.91□□□□□ -0.34
ABR-220ENST00000573325 SYTL5Q8TDW5 730 aaPredicted RBP12.91□□□□□ -0.34
ABR-220ENST00000573325 ASB2Q96Q27 587 aa12.91□□□□□ -0.34
ABR-220ENST00000573325 LNPKQ9C0E8 428 aa12.91□□□□□ -0.34
ABR-220ENST00000573325 UBA5Q9GZZ9 404 aa12.91□□□□□ -0.34
ABR-220ENST00000573325 MAF1Q9H063 256 aa12.91□□□□□ -0.34
ABR-220ENST00000573325 ADD3Q9UEY8 706 aaKnown RBP12.91□□□□□ -0.34
ABR-220ENST00000573325 PCDHA11Q9Y5I1 949 aa12.91□□□□□ -0.34
ABR-220ENST00000573325 PITPNM1O00562 1244 aa12.9□□□□□ -0.34
ABR-220ENST00000573325 LPXNO60711 386 aa12.9□□□□□ -0.34
ABR-220ENST00000573325 IQCF3P0C7M6 154 aa12.9□□□□□ -0.34
ABR-220ENST00000573325 SEC23AQ15436 765 aa12.9□□□□□ -0.34
ABR-220ENST00000573325 RAB30Q15771 203 aa12.9□□□□□ -0.34
ABR-220ENST00000573325 TRIM71Q2Q1W2 868 aaKnown RBP12.9□□□□□ -0.34
ABR-220ENST00000573325 RRP12Q5JTH9 1297 aaKnown RBP12.9□□□□□ -0.34
ABR-220ENST00000573325 ENAHQ8N8S7 591 aaPredicted RBP12.9□□□□□ -0.34
ABR-220ENST00000573325 SCFD2Q8WU76 684 aa12.9□□□□□ -0.34
ABR-220ENST00000573325 ATXN2LQ8WWM7 1075 aaKnown RBP12.9□□□□□ -0.34
ABR-220ENST00000573325 TAAR1Q96RJ0 339 aa12.9□□□□□ -0.34
ABR-220ENST00000573325 ZKSCAN3Q9BRR0 538 aa12.9□□□□□ -0.34
ABR-220ENST00000573325 MTG1Q9BT17 334 aaPredicted RBP12.9□□□□□ -0.34
ABR-220ENST00000573325 POLR3EQ9NVU0 708 aa12.9□□□□□ -0.34
ABR-220ENST00000573325 PTPDC1A2A3K4 754 aa12.89□□□□□ -0.35
ABR-220ENST00000573325 HAS3O00219 553 aa12.89□□□□□ -0.35
ABR-220ENST00000573325 NKRFO15226 690 aaKnown RBP eCLIP12.89□□□□□ -0.35
ABR-220ENST00000573325 ZEB2O60315 1214 aa12.89□□□□□ -0.35
ABR-220ENST00000573325 BMP1P13497 986 aa12.89□□□□□ -0.35
ABR-220ENST00000573325 CALML3P27482 149 aa12.89□□□□□ -0.35
ABR-220ENST00000573325 GPATCH4Q5T3I0 446 aaKnown RBP12.89□□□□□ -0.35
ABR-220ENST00000573325 ADGRF4Q8IZF3 695 aa12.89□□□□□ -0.35
ABR-220ENST00000573325 OR6J1Q8NGC5 347 aa12.89□□□□□ -0.35
ABR-220ENST00000573325 WNT8BQ93098 351 aa12.89□□□□□ -0.35
ABR-220ENST00000573325 JMJD4Q9H9V9 463 aa12.89□□□□□ -0.35
ABR-220ENST00000573325 ZSWIM5Q9P217 1185 aa12.89□□□□□ -0.35
ABR-220ENST00000573325 LAMA4Q16363 1823 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 PTPRSQ13332 1948 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 RFXAPO00287 272 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 PFKMP08237 780 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 CPT1AP50416 773 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 TAP1Q03518 808 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 PTPN11Q06124 597 aaPredicted RBP12.88□□□□□ -0.35
ABR-220ENST00000573325 MBTPS1Q14703 1052 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 QRICH1Q2TAL8 776 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 GDF6Q6KF10 455 aaPredicted RBP12.88□□□□□ -0.35
ABR-220ENST00000573325 MFSD6Q6ZSS7 791 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 STAG2Q8N3U4 1231 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 PNMA1Q8ND90 353 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 AFG1LQ8WV93 481 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 EMID1Q96A84 441 aaPredicted RBP12.88□□□□□ -0.35
ABR-220ENST00000573325 PNMA2Q9UL42 364 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 ISY1Q9ULR0 285 aaKnown RBP12.88□□□□□ -0.35
ABR-220ENST00000573325 MTCH2Q9Y6C9 303 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 TAF6LQ9Y6J9 622 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 SLC4A7Q9Y6M7 1214 aa12.88□□□□□ -0.35
ABR-220ENST00000573325 KDM4AO75164 1064 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 CXCL10P02778 98 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 MMP3P08254 477 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 MYL3P08590 195 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 SUPT20HL2P0C7V6 817 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 TXNP10599 105 aaKnown RBP12.87□□□□□ -0.35
ABR-220ENST00000573325 ATP2A2P16615 1042 aaKnown RBP12.87□□□□□ -0.35
ABR-220ENST00000573325 HOXC8P31273 242 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 NT5C2P49902 561 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 HSD17B4P51659 736 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 PPP2R5BQ15173 497 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 CDC37Q16543 378 aaPredicted RBP12.87□□□□□ -0.35
ABR-220ENST00000573325 LY6KQ17RY6 165 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 KRT40Q6A162 431 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 CHD1LQ86WJ1 897 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 RPUSD2Q8IZ73 545 aaKnown RBP12.87□□□□□ -0.35
ABR-220ENST00000573325 SYMPKQ92797 1274 aaKnown RBP12.87□□□□□ -0.35
ABR-220ENST00000573325 DSCC1Q9BVC3 393 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 SLC28A3Q9HAS3 691 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 MSRAQ9UJ68 235 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 DDX41Q9UJV9 622 aaKnown RBP12.87□□□□□ -0.35
ABR-220ENST00000573325 TANC1Q9C0D5 1861 aa12.87□□□□□ -0.35
ABR-220ENST00000573325 TRIOO75962 3097 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 B4E1Z4 1266 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 TNFRSF10AO00220 468 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 KPNA6O60684 536 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 NBNO60934 754 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 CA3P07451 260 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 PDE4AP27815 886 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 RFC2P35250 354 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 PDE4DQ08499 809 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 USH1GQ495M9 461 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 STOX1Q6ZVD7 989 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 CYB5R4Q7L1T6 521 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 DEFB128Q7Z7B8 93 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 IL31RAQ8NI17 732 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 PHOSPHO2Q8TCD6 241 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 ESR2Q92731 530 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 ZSCAN10Q96SZ4 725 aaPredicted RBP12.86□□□□□ -0.35
ABR-220ENST00000573325 GAS2L1Q99501 681 aaPredicted RBP12.86□□□□□ -0.35
ABR-220ENST00000573325 BCAS3Q9H6U6 928 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 SENP2Q9HC62 589 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 THEGQ9P2T0 379 aa12.86□□□□□ -0.35
ABR-220ENST00000573325 LCHNA4D1U4 455 aa12.85□□□□□ -0.35
ABR-220ENST00000573325 PALM3A6NDB9 673 aaPredicted RBP12.85□□□□□ -0.35
ABR-220ENST00000573325 CYTH3O43739 400 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms