RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 ATP2B2Q01814 1243 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 SEMA3FQ13275 785 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 KRT26Q7Z3Y9 468 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 SLF2Q8IX21 1173 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 GLIS3Q8NEA6 775 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 NEK11Q8NG66 645 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 HNRNPLLQ8WVV9 542 aaKnown RBP12.51□□□□□ -0.41
RPAIN-212ENST00000573126 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-212ENST00000573126 NUP58Q9BVL2 599 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 DDX4Q9NQI0 724 aaKnown RBP12.51□□□□□ -0.41
RPAIN-212ENST00000573126 KRT86O43790 486 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 ERLIN1O75477 346 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 SMARCA1P28370 1054 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 SLC16A2P36021 539 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 FKBP15Q5T1M5 1219 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 CENPPQ6IPU0 288 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 KCNK18Q7Z418 384 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 ZSCAN29Q8IWY8 852 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-212ENST00000573126 SNX29Q8TEQ0 813 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 TBC1D22AQ8WUA7 517 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 MMS19Q96T76 1030 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 MXD3Q9BW11 206 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-212ENST00000573126 SAR1BQ9Y6B6 198 aa12.51□□□□□ -0.41
RPAIN-212ENST00000573126 NOVP48745 357 aa12.5□□□□□ -0.41
RPAIN-212ENST00000573126 LRRC41Q15345 812 aa12.5□□□□□ -0.41
RPAIN-212ENST00000573126 TMEM266Q2M3C6 531 aa12.5□□□□□ -0.41
RPAIN-212ENST00000573126 TTBK2Q6IQ55 1244 aa12.5□□□□□ -0.41
RPAIN-212ENST00000573126 RETREG2Q8NC44 543 aa12.5□□□□□ -0.41
RPAIN-212ENST00000573126 L1RE1Q9UN81 338 aa12.5□□□□□ -0.41
RPAIN-212ENST00000573126 PPP1R11O60927 126 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-212ENST00000573126 N4BP1O75113 896 aaKnown RBP12.5□□□□□ -0.41
RPAIN-212ENST00000573126 HDXQ7Z353 690 aa12.5□□□□□ -0.41
RPAIN-212ENST00000573126 ERGIC2Q96RQ1 377 aa12.5□□□□□ -0.41
RPAIN-212ENST00000573126 ZNF263O14978 683 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 ZNF185O15231 689 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 RAD21O60216 631 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 BBOX1O75936 387 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.41
RPAIN-212ENST00000573126 SCNN1DP51172 638 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 GABPAQ06546 454 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 ECM1Q16610 540 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 ASPRV1Q53RT3 343 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 UNC13DQ70J99 1090 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 C2CD5Q86YS7 1000 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 ADGRF4Q8IZF3 695 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 SMCR8Q8TEV9 937 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-212ENST00000573126 DDX12PQ92771 950 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 CCDC42Q96M95 316 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 NDST4Q9H3R1 872 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 MMRN2Q9H8L6 949 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 JMJD4Q9H9V9 463 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 STK17AQ9UEE5 414 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 EIF3CLB5ME19 914 aaKnown RBP12.49□□□□□ -0.41
RPAIN-212ENST00000573126 PPP1R2P41236 205 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 FAM193AP78312 1265 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 VWA3BQ502W6 1294 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 KRT79Q5XKE5 535 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 KCTD1Q719H9 257 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 CCDC170Q8IYT3 715 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 RAD54LQ92698 747 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 EIF3CQ99613 913 aaKnown RBP12.49□□□□□ -0.41
RPAIN-212ENST00000573126 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
RPAIN-212ENST00000573126 CDK5RAP2Q96SN8 1893 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 CCDC66A2RUB6 948 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 MPHOSPH10O00566 681 aaKnown RBP12.48□□□□□ -0.41
RPAIN-212ENST00000573126 TTLL1O95922 423 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 TUBB4BP68371 445 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 DDR1Q08345 913 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 CASP8Q14790 479 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 CCDC96Q2M329 555 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 CERS5Q8N5B7 392 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 CCDC155Q8N6L0 562 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 RAB34Q9BZG1 259 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 JADE2Q9NQC1 790 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 SERPINB13Q9UIV8 391 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 MYH1P12882 1939 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 MARCH6O60337 910 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 SSBP05455 408 aaKnown RBP eCLIP12.48□□□□□ -0.41
RPAIN-212ENST00000573126 SNHG28P0DPA3 235 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 ZNF543Q08ER8 600 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 KIF5AQ12840 1032 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 ORC2Q13416 577 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-212ENST00000573126 PAPD7Q5XG87 772 aaKnown RBP12.48□□□□□ -0.41
RPAIN-212ENST00000573126 EHBP1Q8NDI1 1231 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 DRC1Q96MC2 740 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 ARHGAP20Q9P2F6 1191 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 DDX25Q9UHL0 483 aaKnown RBP12.48□□□□□ -0.41
RPAIN-212ENST00000573126 ADAM21Q9UKJ8 722 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 SIK3Q9Y2K2 1263 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 NHSQ6T4R5 1651 aa12.48□□□□□ -0.41
RPAIN-212ENST00000573126 PVALEFA0A1B0GWK0 134 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 USP17L10C9JJH3 530 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 UBAP1LF5GYI3 381 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 hCG_1984214I3L0E3 225 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 ZMYND10O75800 440 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 ADRA2BP18089 450 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 SPA17Q15506 151 aa12.47□□□□□ -0.41
RPAIN-212ENST00000573126 ZNF713Q8N859 430 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-212ENST00000573126 IFIH1Q9BYX4 1025 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms