RNA–Protein interactions for RNA: ENST00000572840.1

RFWD3-206, Transcript of ring finger and WD repeat domain 3, humanhuman

TSL 2

Gene RFWD3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3-206ENST00000572840 DDX11Q96FC9 970 aa10.86□□□□□ -0.67
RFWD3-206ENST00000572840 DNAJC2Q99543 621 aaKnown RBP10.86□□□□□ -0.67
RFWD3-206ENST00000572840 NUP88Q99567 741 aaPredicted RBP10.86□□□□□ -0.67
RFWD3-206ENST00000572840 BCL11AQ9H165 835 aa10.86□□□□□ -0.67
RFWD3-206ENST00000572840 IL23AQ9NPF7 189 aa10.86□□□□□ -0.67
RFWD3-206ENST00000572840 CHD7Q9P2D1 2997 aa10.86□□□□□ -0.67
RFWD3-206ENST00000572840 EXOC6BQ9Y2D4 811 aa10.86□□□□□ -0.67
RFWD3-206ENST00000572840 TCRBV5S4A2TA0A5A2 114 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 RFXAPO00287 272 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 FGBP02675 491 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 CHGBP05060 677 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 CST5P28325 142 aaPredicted RBP10.85□□□□□ -0.67
RFWD3-206ENST00000572840 CDK8P49336 464 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 CCL23P55773 120 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 BEX3Q00994 111 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 ACVR2BQ13705 512 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 CCDC144BQ3MJ40 725 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 GNASQ5JWF2 1037 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 SNRNP48Q6IEG0 339 aaKnown RBP10.85□□□□□ -0.67
RFWD3-206ENST00000572840 B4GALNT3Q6L9W6 998 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 NYAP1Q6ZVC0 841 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 CPXCR1Q8N123 301 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 PCSK9Q8NBP7 692 aaKnown RBP10.85□□□□□ -0.67
RFWD3-206ENST00000572840 HERVK_113Q902F9 699 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 EPHX3Q9H6B9 360 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 IL1RAPL2Q9NP60 686 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 MTMR7Q9Y216 660 aa10.85□□□□□ -0.67
RFWD3-206ENST00000572840 GNEQ9Y223 722 aaKnown RBP10.85□□□□□ -0.67
RFWD3-206ENST00000572840 SYNGAP1Q96PV0 1343 aa10.84□□□□□ -0.67
RFWD3-206ENST00000572840 BAZ2AQ9UIF9 1905 aaKnown RBP10.84□□□□□ -0.67
RFWD3-206ENST00000572840 DNAJC25-GNG10A0A024R161 153 aa10.84□□□□□ -0.67
RFWD3-206ENST00000572840 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.84□□□□□ -0.67
RFWD3-206ENST00000572840 GOLIM4O00461 696 aa10.84□□□□□ -0.67
RFWD3-206ENST00000572840 CTAGE5O15320 804 aa10.84□□□□□ -0.67
RFWD3-206ENST00000572840 TLR3O15455 904 aaKnown RBP10.84□□□□□ -0.67
RFWD3-206ENST00000572840 CD4P01730 458 aa10.84□□□□□ -0.67
RFWD3-206ENST00000572840 PTGS1P23219 599 aa10.84□□□□□ -0.67
RFWD3-206ENST00000572840 GJA9P57773 515 aa10.84□□□□□ -0.67
RFWD3-206ENST00000572840 TTF1Q15361 905 aaPredicted RBP10.84□□□□□ -0.67
RFWD3-206ENST00000572840 TMEM164Q5U3C3 297 aa10.84□□□□□ -0.67
RFWD3-206ENST00000572840 MAMDC4Q6UXC1 1216 aa10.84□□□□□ -0.67
RFWD3-206ENST00000572840 THSD4Q6ZMP0 1018 aa10.84□□□□□ -0.67
RFWD3-206ENST00000572840 FGD4Q96M96 766 aa10.84□□□□□ -0.67
RFWD3-206ENST00000572840 C1QTNF1Q9BXJ1 281 aa10.84□□□□□ -0.67
RFWD3-206ENST00000572840 USP17L12C9JPN9 530 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 USP17L21D6R901 530 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 MBD4O95243 580 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 COPB2P35606 906 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 COPS2P61201 443 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 C12orf60Q5U649 245 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 KRT40Q6A162 431 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 TMED8Q6PL24 325 aaPredicted RBP10.83□□□□□ -0.68
RFWD3-206ENST00000572840 CXCL17Q6UXB2 119 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 C16orf86Q6ZW13 317 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 ARMCX2Q7L311 632 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 STK11IPQ8N1F8 1099 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 MSL3Q8N5Y2 521 aaKnown RBP10.83□□□□□ -0.68
RFWD3-206ENST00000572840 SCLYQ96I15 445 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 CCDC17Q96LX7 622 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 SLF1Q9BQI6 1058 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 LRFN3Q9BTN0 628 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 TEX13BQ9BXU2 312 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 UPF3AQ9H1J1 476 aaKnown RBP10.83□□□□□ -0.68
RFWD3-206ENST00000572840 HIPK3Q9H422 1215 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 CERS4Q9HA82 394 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 SPC25Q9HBM1 224 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 RAVER2Q9HCJ3 691 aaKnown RBP10.83□□□□□ -0.68
RFWD3-206ENST00000572840 PRDM9Q9NQV7 894 aa10.83□□□□□ -0.68
RFWD3-206ENST00000572840 NOVA2Q9UNW9 492 aaKnown RBP10.83□□□□□ -0.68
RFWD3-206ENST00000572840 ADH1BP00325 375 aa10.82□□□□□ -0.68
RFWD3-206ENST00000572840 MAP7D1Q3KQU3 841 aa10.82□□□□□ -0.68
RFWD3-206ENST00000572840 ZKSCAN2Q63HK3 967 aa10.82□□□□□ -0.68
RFWD3-206ENST00000572840 RNF135Q8IUD6 432 aa10.82□□□□□ -0.68
RFWD3-206ENST00000572840 ANKRD35Q8N283 1001 aa10.82□□□□□ -0.68
RFWD3-206ENST00000572840 DEPDC4Q8N2C3 294 aa10.82□□□□□ -0.68
RFWD3-206ENST00000572840 ADAM32Q8TC27 787 aa10.82□□□□□ -0.68
RFWD3-206ENST00000572840 STK32AQ8WU08 396 aa10.82□□□□□ -0.68
RFWD3-206ENST00000572840 WNT8AQ9H1J5 351 aa10.82□□□□□ -0.68
RFWD3-206ENST00000572840 MTIF3Q9H2K0 278 aaKnown RBP10.82□□□□□ -0.68
RFWD3-206ENST00000572840 ABHD16BQ9H3Z7 469 aa10.82□□□□□ -0.68
RFWD3-206ENST00000572840 KANSL2Q9H9L4 492 aa10.82□□□□□ -0.68
RFWD3-206ENST00000572840 PCDHB9Q9Y5E1 797 aa10.82□□□□□ -0.68
RFWD3-206ENST00000572840 DDX49Q9Y6V7 483 aaKnown RBP10.82□□□□□ -0.68
RFWD3-206ENST00000572840 ASTN1O14525 1302 aa10.82□□□□□ -0.68
RFWD3-206ENST00000572840 B4GALT4O60513 344 aa10.81□□□□□ -0.68
RFWD3-206ENST00000572840 PSMC6P62333 389 aa10.81□□□□□ -0.68
RFWD3-206ENST00000572840 PTK7Q13308 1070 aa10.81□□□□□ -0.68
RFWD3-206ENST00000572840 ITGA7Q13683 1181 aa10.81□□□□□ -0.68
RFWD3-206ENST00000572840 NCOA4Q13772 614 aa10.81□□□□□ -0.68
RFWD3-206ENST00000572840 CEP85Q6P2H3 762 aa10.81□□□□□ -0.68
RFWD3-206ENST00000572840 NOL8Q76FK4 1167 aaKnown RBP10.81□□□□□ -0.68
RFWD3-206ENST00000572840 SND1Q7KZF4 910 aaKnown RBP eCLIP10.81□□□□□ -0.68
RFWD3-206ENST00000572840 ITPRIPQ8IWB1 547 aa10.81□□□□□ -0.68
RFWD3-206ENST00000572840 CCDC144CPQ8IYA2 1237 aa10.81□□□□□ -0.68
RFWD3-206ENST00000572840 PLPP7Q8NBV4 271 aa10.81□□□□□ -0.68
RFWD3-206ENST00000572840 KIFC2Q96AC6 838 aa10.81□□□□□ -0.68
RFWD3-206ENST00000572840 VWCEQ96DN2 955 aa10.81□□□□□ -0.68
RFWD3-206ENST00000572840 ARHGAP9Q9BRR9 750 aa10.81□□□□□ -0.68
RFWD3-206ENST00000572840 KATNBL1Q9H079 304 aa10.81□□□□□ -0.68
RFWD3-206ENST00000572840 TRPV6Q9H1D0 765 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms