RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 WNK4Q96J92 1243 aa13.56□□□□□ -0.24
TOM1L1-213ENST00000572405 NAP1L4Q99733 375 aaKnown RBP13.56□□□□□ -0.24
TOM1L1-213ENST00000572405 TRIM5Q9C035 493 aa13.56□□□□□ -0.24
TOM1L1-213ENST00000572405 RAVER2Q9HCJ3 691 aaKnown RBP13.56□□□□□ -0.24
TOM1L1-213ENST00000572405 PPP1R9AQ9ULJ8 1098 aa13.56□□□□□ -0.24
TOM1L1-213ENST00000572405 OTOFQ9HC10 1997 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 PARP14Q460N5 1801 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 CYP3A7-CYP3A51PA0A087WV96 503 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 FAM86B1E9PN63 330 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 GTPBP6O43824 516 aaPredicted RBP13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 PTMAP06454 111 aaKnown RBP13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 FAM86B2P0C5J1 330 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 CYP3A7P24462 503 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 VGLL4Q14135 290 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 NOL9Q5SY16 702 aaKnown RBP13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 TRIML1Q8N9V2 468 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 MBOAT7Q96N66 472 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 SLC38A10Q9HBR0 1119 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 KCNMB3Q9NPA1 279 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 HOMER2Q9NSB8 354 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 NFIBO00712 420 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 ZNF75DP51815 510 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 UBXN2AP68543 259 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 MOXD1Q6UVY6 613 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 SMYD4Q8IYR2 804 aaPredicted RBP13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 LENG9Q96B70 501 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 ATG4CQ96DT6 458 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 GSDMAQ96QA5 445 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 SNCAIPQ9Y6H5 919 aa13.55□□□□□ -0.24
TOM1L1-213ENST00000572405 EPHX2P34913 555 aa13.54□□□□□ -0.24
TOM1L1-213ENST00000572405 MYL5Q02045 173 aa13.54□□□□□ -0.24
TOM1L1-213ENST00000572405 FMR1Q06787 632 aaKnown RBP eCLIP13.54□□□□□ -0.24
TOM1L1-213ENST00000572405 GRB10Q13322 594 aa13.54□□□□□ -0.24
TOM1L1-213ENST00000572405 PLA2G4DQ86XP0 818 aa13.54□□□□□ -0.24
TOM1L1-213ENST00000572405 SPC24Q8NBT2 197 aa13.54□□□□□ -0.24
TOM1L1-213ENST00000572405 CYP2W1Q8TAV3 490 aa13.54□□□□□ -0.24
TOM1L1-213ENST00000572405 SNX29Q8TEQ0 813 aa13.54□□□□□ -0.24
TOM1L1-213ENST00000572405 NUDT12Q9BQG2 462 aa13.54□□□□□ -0.24
TOM1L1-213ENST00000572405 RAB34Q9BZG1 259 aa13.54□□□□□ -0.24
TOM1L1-213ENST00000572405 PAPPA2Q9BXP8 1791 aa13.54□□□□□ -0.24
TOM1L1-213ENST00000572405 IKBKBO14920 756 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 ALAS1P13196 640 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 SARM1Q6SZW1 724 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 TRMT44Q8IYL2 757 aaKnown RBP13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 MLKLQ8NB16 471 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 ETNPPLQ8TBG4 499 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 CNKSR2Q8WXI2 1034 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 CALML4Q96GE6 196 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 HSD3B7Q9H2F3 369 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 KBTBD4Q9NVX7 518 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 PCDHA12Q9UN75 941 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 STAT3P40763 770 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 PDIA5Q14554 519 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 MUM1L1Q5H9M0 696 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 CLEC4DQ8WXI8 215 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 C12orf42Q96LP6 360 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 PNMA5Q96PV4 448 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 AFG3L2Q9Y4W6 797 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 RLFQ13129 1914 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 WDR90Q96KV7 1748 aa13.53□□□□□ -0.24
TOM1L1-213ENST00000572405 SMTNL1A8MU46 457 aa13.52□□□□□ -0.24
TOM1L1-213ENST00000572405 VWA5AO00534 786 aa13.52□□□□□ -0.24
TOM1L1-213ENST00000572405 RPN1P04843 607 aaKnown RBP13.52□□□□□ -0.24
TOM1L1-213ENST00000572405 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.24
TOM1L1-213ENST00000572405 CIITAP33076 1130 aa13.52□□□□□ -0.24
TOM1L1-213ENST00000572405 DHX8Q14562 1220 aaKnown RBP13.52□□□□□ -0.24
TOM1L1-213ENST00000572405 Q4G0T1 1027 aa13.52□□□□□ -0.24
TOM1L1-213ENST00000572405 KRT79Q5XKE5 535 aa13.52□□□□□ -0.24
TOM1L1-213ENST00000572405 CDK5RAP3Q96JB5 506 aa13.52□□□□□ -0.24
TOM1L1-213ENST00000572405 ZFP91Q96JP5 570 aaPredicted RBP13.52□□□□□ -0.24
TOM1L1-213ENST00000572405 COL20A1Q9P218 1284 aa13.52□□□□□ -0.24
TOM1L1-213ENST00000572405 CYP3A4P08684 503 aa13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 ATP1A3P13637 1013 aa13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 ZNF76P36508 570 aa13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 HSD17B4P51659 736 aa13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 MAP3K9P80192 1104 aa13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 EAPPQ56P03 285 aaPredicted RBP13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 KLHL10Q6JEL2 608 aa13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 USP50Q70EL3 339 aaPredicted RBP13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 MOB2Q70IA6 237 aa13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 CDCA5Q96FF9 252 aa13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 CUEDC2Q9H467 287 aa13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 DACH1Q9UI36 760 aa13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 CTDP1Q9Y5B0 961 aaPredicted RBP13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 COL11A1P12107 1806 aaPredicted RBP13.52□□□□□ -0.25
TOM1L1-213ENST00000572405 IGLV3-22A0A075B6J6 115 aa13.51□□□□□ -0.25
TOM1L1-213ENST00000572405 GLTPD2A6NH11 291 aa13.51□□□□□ -0.25
TOM1L1-213ENST00000572405 C19orf81C9J6K1 198 aa13.51□□□□□ -0.25
TOM1L1-213ENST00000572405 MSH4O15457 936 aa13.51□□□□□ -0.25
TOM1L1-213ENST00000572405 PPP1R12BO60237 982 aaPredicted RBP13.51□□□□□ -0.25
TOM1L1-213ENST00000572405 ZBED4O75132 1171 aa13.51□□□□□ -0.25
TOM1L1-213ENST00000572405 ECM1Q16610 540 aa13.51□□□□□ -0.25
TOM1L1-213ENST00000572405 KCNK18Q7Z418 384 aa13.51□□□□□ -0.25
TOM1L1-213ENST00000572405 SLFN12Q8IYM2 578 aa13.51□□□□□ -0.25
TOM1L1-213ENST00000572405 MED15Q96RN5 788 aa13.51□□□□□ -0.25
TOM1L1-213ENST00000572405 BLOC1S4Q9NUP1 217 aa13.51□□□□□ -0.25
TOM1L1-213ENST00000572405 TMOD4Q9NZQ9 345 aa13.51□□□□□ -0.25
TOM1L1-213ENST00000572405 CSADQ9Y600 493 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms