RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 MSL3Q8N5Y2 521 aaKnown RBP9.01□□□□□ -0.97
SMG6-211ENST00000572369 FANCBQ8NB91 859 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 KHSRPQ92945 711 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMG6-211ENST00000572369 BRF1Q92994 677 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 CYP39A1Q9NYL5 469 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 CXXC1Q9P0U4 656 aaPredicted RBP9.01□□□□□ -0.97
SMG6-211ENST00000572369 DDX20Q9UHI6 824 aaKnown RBP9.01□□□□□ -0.97
SMG6-211ENST00000572369 PCDHA1Q9Y5I3 950 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 CYP46A1Q9Y6A2 500 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 REV3LO60673 3130 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 DNAH12Q6ZR08 3092 aa9.01□□□□□ -0.97
SMG6-211ENST00000572369 BAZ2BQ9UIF8 2168 aaKnown RBP9□□□□□ -0.97
SMG6-211ENST00000572369 PNMA6FA0A0J9YX94 578 aa9□□□□□ -0.97
SMG6-211ENST00000572369 B4DLN1 442 aa9□□□□□ -0.97
SMG6-211ENST00000572369 SEPT4O43236 478 aa9□□□□□ -0.97
SMG6-211ENST00000572369 PLEKHA8P1O95397 391 aa9□□□□□ -0.97
SMG6-211ENST00000572369 RPS6KB1P23443 525 aa9□□□□□ -0.97
SMG6-211ENST00000572369 MRPL12P52815 198 aaKnown RBP9□□□□□ -0.97
SMG6-211ENST00000572369 RPS6P62753 249 aaKnown RBP9□□□□□ -0.97
SMG6-211ENST00000572369 APOBRQ0VD83 1088 aa9□□□□□ -0.97
SMG6-211ENST00000572369 APOA5Q6Q788 366 aa9□□□□□ -0.97
SMG6-211ENST00000572369 MAMDC4Q6UXC1 1216 aa9□□□□□ -0.97
SMG6-211ENST00000572369 SLC30A10Q6XR72 485 aa9□□□□□ -0.97
SMG6-211ENST00000572369 NOL8Q76FK4 1167 aaKnown RBP9□□□□□ -0.97
SMG6-211ENST00000572369 ERMP1Q7Z2K6 904 aa9□□□□□ -0.97
SMG6-211ENST00000572369 ZNF467Q7Z7K2 595 aaPredicted RBP9□□□□□ -0.97
SMG6-211ENST00000572369 SGMS1Q86VZ5 419 aa9□□□□□ -0.97
SMG6-211ENST00000572369 CMTR1Q8N1G2 835 aaKnown RBP9□□□□□ -0.97
SMG6-211ENST00000572369 FAM133AQ8N9E0 248 aa9□□□□□ -0.97
SMG6-211ENST00000572369 KCNB2Q92953 911 aa9□□□□□ -0.97
SMG6-211ENST00000572369 GAS2L1Q99501 681 aaPredicted RBP9□□□□□ -0.97
SMG6-211ENST00000572369 ABHD16BQ9H3Z7 469 aa9□□□□□ -0.97
SMG6-211ENST00000572369 RIOX1Q9H6W3 641 aa9□□□□□ -0.97
SMG6-211ENST00000572369 RBM28Q9NW13 759 aaKnown RBP9□□□□□ -0.97
SMG6-211ENST00000572369 CDKN2AIPQ9NXV6 580 aaPredicted RBP9□□□□□ -0.97
SMG6-211ENST00000572369 NRBP1Q9UHY1 535 aa9□□□□□ -0.97
SMG6-211ENST00000572369 FAM184BQ9ULE4 1060 aa9□□□□□ -0.97
SMG6-211ENST00000572369 LCTP09848 1927 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 LTBP2Q14767 1821 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 CCDC196A0A1B0GTZ2 297 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 SOWAHBA6NEL2 793 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 RARBP10826 455 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 AKR1A1P14550 325 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 ITGB8P26012 769 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 METAP2P50579 478 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMG6-211ENST00000572369 ALDH5A1P51649 535 aaPredicted RBP8.99□□□□□ -0.97
SMG6-211ENST00000572369 PDE4DQ08499 809 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 ACVR2BQ13705 512 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 RTN1Q16799 776 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 LRRC26Q2I0M4 334 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 RUFY3Q7L099 469 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 EEPD1Q7L9B9 569 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 ARRDC4Q8NCT1 418 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 TRPV1Q8NER1 839 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 CLEC4DQ8WXI8 215 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 PURBQ96QR8 312 aaKnown RBP8.99□□□□□ -0.97
SMG6-211ENST00000572369 SPZ1Q9BXG8 430 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 OGDHLQ9ULD0 1010 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 BRPF3Q9ULD4 1205 aa8.99□□□□□ -0.97
SMG6-211ENST00000572369 KBTBD13C9JR72 458 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 CYTH3O43739 400 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 SNAI1O95863 264 aaPredicted RBP8.98□□□□□ -0.97
SMG6-211ENST00000572369 SMARCA1P28370 1054 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 KCNQ1P51787 676 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 CCDC85BQ15834 202 aaPredicted RBP8.98□□□□□ -0.97
SMG6-211ENST00000572369 AAK1Q2M2I8 961 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 ARHGEF16Q5VV41 709 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 LHX8Q68G74 356 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 SRBD1Q8N5C6 995 aaKnown RBP8.98□□□□□ -0.97
SMG6-211ENST00000572369 RGS22Q8NE09 1264 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 DNERQ8NFT8 737 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 TBC1D5Q92609 795 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 CUL5Q93034 780 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 MTMR8Q96EF0 704 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 FGD4Q96M96 766 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 PHOX2BQ99453 314 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 UPF3BQ9BZI7 483 aaKnown RBP8.98□□□□□ -0.97
SMG6-211ENST00000572369 TM6SF1Q9BZW5 370 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 SPC25Q9HBM1 224 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 ZSWIM6Q9HCJ5 1215 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 XPNPEP3Q9NQH7 507 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 PDRG1Q9NUG6 133 aa8.98□□□□□ -0.97
SMG6-211ENST00000572369 LRRC37A2A6NM11 1700 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 CHD9Q3L8U1 2897 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 hCG_1642624A0A1W2PR95 340 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 PI4K2BG5E9Z4 385 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 GCOM1H8Y6P7 765 aaPredicted RBP8.97□□□□□ -0.97
SMG6-211ENST00000572369 PPP1R11O60927 126 aaPredicted RBP8.97□□□□□ -0.97
SMG6-211ENST00000572369 IGHA2P01877 340 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 POLR2MP0CAP2 368 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 ZNF865P0CJ78 1059 aaPredicted RBP8.97□□□□□ -0.97
SMG6-211ENST00000572369 HOXA13P31271 388 aaPredicted RBP8.97□□□□□ -0.97
SMG6-211ENST00000572369 AKAP17AQ02040 695 aaKnown RBP8.97□□□□□ -0.97
SMG6-211ENST00000572369 TFF2Q03403 129 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 PPP2R5BQ15173 497 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 CCDC144BQ3MJ40 725 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 GJC2Q5T442 439 aaPredicted RBP8.97□□□□□ -0.97
SMG6-211ENST00000572369 TMTC3Q6ZXV5 915 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 HEATR3Q7Z4Q2 680 aa8.97□□□□□ -0.97
SMG6-211ENST00000572369 RNF180Q86T96 592 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms