RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 ISCA1Q9BUE6 129 aa12.24□□□□□ -0.45
PCDHGA4-201ENST00000571252 ZBTB22O15209 634 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 CLNS1AP54105 237 aaKnown RBP12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 FKBP3Q00688 224 aaKnown RBP12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 ARHGAP44Q17R89 818 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 CCDC105Q8IYK2 499 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 CNBD1Q8NA66 436 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 SMCR8Q8TEV9 937 aaPredicted RBP12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 STK32BQ9NY57 414 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 ASIC3Q9UHC3 531 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 KDM3AQ9Y4C1 1321 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 C6orf163Q5TEZ5 329 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 TMTC3Q6ZXV5 915 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 TAOK1Q7L7X3 1001 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 NDST4Q9H3R1 872 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 PCDHA13Q9Y5I0 950 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 MROH7-TTC4A0A0A0MT08 1334 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 ZNF335Q9H4Z2 1342 aaPredicted RBP12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 A0A1B0GTH6 734 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 EIF3CLB5ME19 914 aaKnown RBP12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 EXOC3O60645 756 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 FTCDO95954 541 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 ANTXR2P58335 489 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 NNTQ13423 1086 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 MYCT1Q8N699 235 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 EIF3CQ99613 913 aaKnown RBP12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 HOMER2Q9NSB8 354 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 ZBTB21Q9ULJ3 1066 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 BUB1BO60566 1050 aaPredicted RBP12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 IRX5P78411 483 aaPredicted RBP12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 GRM1Q13255 1194 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 ADAT2Q7Z6V5 191 aaKnown RBP12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 IQCGQ9H095 443 aaKnown RBP12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 EFCC1Q9HA90 598 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 HDAC6Q9UBN7 1215 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 RNF14Q9UBS8 474 aa12.23□□□□□ -0.45
PCDHGA4-201ENST00000571252 NAA35Q5VZE5 725 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 EMBQ6PCB8 327 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 USP49Q70CQ1 688 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 PLCB1Q9NQ66 1216 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 FRMPD2Q68DX3 1309 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 MST1RQ04912 1400 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 H2AFXP16104 143 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 GSPT2Q8IYD1 628 aaKnown RBP12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 GSG1L2A8MUP6 293 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 ALDH3A1P30838 453 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 RBM26Q5T8P6 1007 aaKnown RBP12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 ALS2CLQ60I27 953 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 ENAHQ8N8S7 591 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 TRIM7Q9C029 511 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 CPDO75976 1380 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 GGCXP38435 758 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 E2F4Q16254 413 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 RAD9BQ6WBX8 426 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 ZNF365Q70YC5 407 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 TBCKQ8TEA7 893 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 STIM2Q9P246 746 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 GGA1Q9UJY5 639 aa12.22□□□□□ -0.45
PCDHGA4-201ENST00000571252 ANO9A1A5B4 782 aa12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 FXR1P51114 621 aaKnown RBP eCLIP12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 USP14P54578 494 aa12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 PPP2R5EQ16537 467 aa12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 REXO1L1PQ8IX06 675 aa12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 RDH13Q8NBN7 331 aa12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 MTA3Q9BTC8 594 aa12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 RIC8AQ9NPQ8 531 aa12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 NR1I3Q14994 352 aa12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 EXOC3L4Q17RC7 722 aa12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 UHMK1Q8TAS1 419 aaKnown RBP12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 IGDCC4Q8TDY8 1250 aa12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 PSTPIP2Q9H939 334 aa12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 PKD2L1Q9P0L9 805 aa12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 ADD3Q9UEY8 706 aaKnown RBP12.21□□□□□ -0.45
PCDHGA4-201ENST00000571252 ARHGEF35A5YM69 484 aa12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 PLA2G4AP47712 749 aa12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 RCAN1P53805 252 aa12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 VSIG1Q86XK7 387 aa12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 LRRC47Q8N1G4 583 aaKnown RBP12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 MYCBPQ99417 103 aaPredicted RBP12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 BCRP11274 1271 aa12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 PDCLQ13371 301 aa12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 TADA2BQ86TJ2 420 aa12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 PPP1R14CQ8TAE6 165 aa12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 CHP1Q99653 195 aa12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 DDX25Q9UHL0 483 aaKnown RBP12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 PRDM4Q9UKN5 801 aa12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 HPS5Q9UPZ3 1129 aa12.21□□□□□ -0.46
PCDHGA4-201ENST00000571252 ATP11AP98196 1134 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 MAEAQ7L5Y9 396 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 MGARPQ8TDB4 240 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 STK17AQ9UEE5 414 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 NFU1Q9UMS0 254 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 KRT5P13647 590 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 NR1D1P20393 614 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 CLUL1Q15846 466 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 KIAA1024Q9UPX6 916 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 ERVV-1B6SEH8 477 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 USP17L8P0C7I0 530 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms