RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 UPF3BQ9BZI7 483 aaKnown RBP15.5■□□□□ 0.07
CCDC40-205ENST00000571028 SMCHD1A6NHR9 2005 aa15.5■□□□□ 0.07
CCDC40-205ENST00000571028 UMODL1Q5DID0 1318 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 DNAJC25-GNG10A0A024R161 153 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 CCDC69A6NI79 296 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 SH2B2O14492 632 aaPredicted RBP15.49■□□□□ 0.07
CCDC40-205ENST00000571028 ADCY6O43306 1168 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 HMGB1P09429 215 aaKnown RBP15.49■□□□□ 0.07
CCDC40-205ENST00000571028 GOLGA8HP0CJ92 632 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 NOVP48745 357 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 BEX3Q00994 111 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 ITGA7Q13683 1181 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 TTBK2Q6IQ55 1244 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 CXCL17Q6UXB2 119 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 KIFC2Q96AC6 838 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 TMEM87BQ96K49 555 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 MYL10Q9BUA6 226 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 UPF2Q9HAU5 1272 aaKnown RBP15.49■□□□□ 0.07
CCDC40-205ENST00000571028 FBXO40Q9UH90 709 aa15.49■□□□□ 0.07
CCDC40-205ENST00000571028 CA3P07451 260 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 RPS6KB1P23443 525 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 SLC16A2P36021 539 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 EXOSC10Q01780 885 aaKnown RBP15.48■□□□□ 0.07
CCDC40-205ENST00000571028 TNFAIP2Q03169 654 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 Q6ZUG5 572 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 PRPF38AQ8NAV1 312 aaKnown RBP15.48■□□□□ 0.07
CCDC40-205ENST00000571028 DCAF4Q8WV16 495 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 ANKS1AQ92625 1134 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 HLA-CQ95604 372 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 SEZ6LQ9BYH1 1024 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 C22orf23Q9BZE7 217 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 AP5M1Q9H0R1 490 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 CERS4Q9HA82 394 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 LY9Q9HBG7 655 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 SYNPO2Q9UMS6 1093 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 RIPK3Q9Y572 518 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 MTCH2Q9Y6C9 303 aa15.48■□□□□ 0.07
CCDC40-205ENST00000571028 NCOR1O75376 2440 aa15.47■□□□□ 0.07
CCDC40-205ENST00000571028 PFKMP08237 780 aa15.47■□□□□ 0.07
CCDC40-205ENST00000571028 PDHBP11177 359 aa15.47■□□□□ 0.07
CCDC40-205ENST00000571028 RXRAP19793 462 aa15.47■□□□□ 0.07
CCDC40-205ENST00000571028 SNAP25P60880 206 aa15.47■□□□□ 0.07
CCDC40-205ENST00000571028 FSCN1Q16658 493 aaKnown RBP15.47■□□□□ 0.07
CCDC40-205ENST00000571028 CATIPQ7Z7H3 387 aa15.47■□□□□ 0.07
CCDC40-205ENST00000571028 TLK2Q86UE8 772 aa15.47■□□□□ 0.07
CCDC40-205ENST00000571028 CCDC144CPQ8IYA2 1237 aa15.47■□□□□ 0.07
CCDC40-205ENST00000571028 GMCL1Q96IK5 515 aa15.47■□□□□ 0.07
CCDC40-205ENST00000571028 LARP6Q9BRS8 491 aaKnown RBP15.47■□□□□ 0.07
CCDC40-205ENST00000571028 NOC4LQ9BVI4 516 aaKnown RBP15.47■□□□□ 0.07
CCDC40-205ENST00000571028 TRPV6Q9H1D0 765 aa15.47■□□□□ 0.07
CCDC40-205ENST00000571028 CYP46A1Q9Y6A2 500 aa15.47■□□□□ 0.07
CCDC40-205ENST00000571028 MYH4Q9Y623 1939 aa15.47■□□□□ 0.07
CCDC40-205ENST00000571028 FAM86C2PA6NEL3 165 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 RFXAPO00287 272 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 GPR37L1O60883 481 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 ACTN1P12814 892 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 SYNE3Q6ZMZ3 975 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 RUFY3Q7L099 469 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 SLC43A3Q8NBI5 491 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 CHST13Q8NET6 341 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 ARNTL2Q8WYA1 636 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 SCLYQ96I15 445 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 BACH2Q9BYV9 841 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 UBA5Q9GZZ9 404 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 WNT8AQ9H1J5 351 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 CPVLQ9H3G5 476 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 RAVER2Q9HCJ3 691 aaKnown RBP15.46■□□□□ 0.07
CCDC40-205ENST00000571028 PDRG1Q9NUG6 133 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 FEM1BQ9UK73 627 aa15.46■□□□□ 0.07
CCDC40-205ENST00000571028 ATP2A1O14983 1001 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 DHX16O60231 1041 aaKnown RBP15.45■□□□□ 0.06
CCDC40-205ENST00000571028 B4GALT4O60513 344 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 PARP1P09874 1014 aaKnown RBP15.45■□□□□ 0.06
CCDC40-205ENST00000571028 POU3F3P20264 500 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-205ENST00000571028 STAT2P52630 851 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 ZNF543Q08ER8 600 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 APOBRQ0VD83 1088 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 ALYREFQ86V81 257 aaKnown RBP15.45■□□□□ 0.06
CCDC40-205ENST00000571028 ZNF654Q8IZM8 581 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 TMTC2Q8N394 836 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 CHURC1Q8WUH1 139 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 BRF1Q92994 677 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 MTA3Q9BTC8 594 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 ZSWIM6Q9HCJ5 1215 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 VAT1LQ9HCJ6 419 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 HOMER2Q9NSB8 354 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 SLC12A7Q9Y666 1083 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 COL11A1P12107 1806 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-205ENST00000571028 CHD7Q9P2D1 2997 aa15.45■□□□□ 0.06
CCDC40-205ENST00000571028 ZNFX1Q9P2E3 1918 aaKnown RBP15.45■□□□□ 0.06
CCDC40-205ENST00000571028 WDR19Q8NEZ3 1342 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 KLF18A0A0U1RQI7 1052 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.44■□□□□ 0.06
CCDC40-205ENST00000571028 KIF28PB7ZC32 967 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 CTAGE5O15320 804 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 TLL1O43897 1013 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 SUPT20HL2P0C7V6 817 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 ANAPC15P60006 121 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 NKX3-2P78367 333 aa15.44■□□□□ 0.06
CCDC40-205ENST00000571028 DEFB128Q7Z7B8 93 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms