RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 NKRFO15226 690 aaKnown RBP eCLIP17.3■□□□□ 0.36
NDE1-203ENST00000570727 ARIH2O95376 493 aa17.3■□□□□ 0.36
NDE1-203ENST00000570727 PPP2R5BQ15173 497 aa17.3■□□□□ 0.36
NDE1-203ENST00000570727 CDC37Q16543 378 aaPredicted RBP17.3■□□□□ 0.36
NDE1-203ENST00000570727 NBPF20Q3BBV1 942 aa17.3■□□□□ 0.36
NDE1-203ENST00000570727 SCFD2Q8WU76 684 aa17.3■□□□□ 0.36
NDE1-203ENST00000570727 PPP1R13LQ8WUF5 828 aa17.3■□□□□ 0.36
NDE1-203ENST00000570727 TAAR1Q96RJ0 339 aa17.3■□□□□ 0.36
NDE1-203ENST00000570727 MAF1Q9H063 256 aa17.3■□□□□ 0.36
NDE1-203ENST00000570727 IL25Q9H293 177 aa17.3■□□□□ 0.36
NDE1-203ENST00000570727 KAT14Q9H8E8 782 aa17.3■□□□□ 0.36
NDE1-203ENST00000570727 TRANK1O15050 2925 aa17.29■□□□□ 0.36
NDE1-203ENST00000570727 TNKSO95271 1327 aa17.29■□□□□ 0.36
NDE1-203ENST00000570727 SUPT20HL2P0C7V6 817 aa17.29■□□□□ 0.36
NDE1-203ENST00000570727 TXNP10599 105 aaKnown RBP17.29■□□□□ 0.36
NDE1-203ENST00000570727 CCDC62Q6P9F0 684 aa17.29■□□□□ 0.36
NDE1-203ENST00000570727 RPUSD2Q8IZ73 545 aaKnown RBP17.29■□□□□ 0.36
NDE1-203ENST00000570727 SYTL5Q8TDW5 730 aaPredicted RBP17.29■□□□□ 0.36
NDE1-203ENST00000570727 MPHOSPH6Q99547 160 aaKnown RBP17.29■□□□□ 0.36
NDE1-203ENST00000570727 PRDM12Q9H4Q4 367 aa17.29■□□□□ 0.36
NDE1-203ENST00000570727 GPHNQ9NQX3 736 aaPredicted RBP17.29■□□□□ 0.36
NDE1-203ENST00000570727 COL20A1Q9P218 1284 aa17.29■□□□□ 0.36
NDE1-203ENST00000570727 YBX2Q9Y2T7 364 aaKnown RBP17.29■□□□□ 0.36
NDE1-203ENST00000570727 ABCB11O95342 1321 aa17.28■□□□□ 0.36
NDE1-203ENST00000570727 TRIP12Q14669 1992 aaPredicted RBP17.28■□□□□ 0.36
NDE1-203ENST00000570727 KIAA1217Q5T5P2 1943 aa17.28■□□□□ 0.36
NDE1-203ENST00000570727 B4DLN1 442 aa17.28■□□□□ 0.36
NDE1-203ENST00000570727 KPNA6O60684 536 aa17.28■□□□□ 0.36
NDE1-203ENST00000570727 MRPL12P52815 198 aaKnown RBP17.28■□□□□ 0.36
NDE1-203ENST00000570727 IMMTQ16891 758 aaKnown RBP17.28■□□□□ 0.36
NDE1-203ENST00000570727 QRICH1Q2TAL8 776 aa17.28■□□□□ 0.36
NDE1-203ENST00000570727 ASPRV1Q53RT3 343 aa17.28■□□□□ 0.36
NDE1-203ENST00000570727 MTIF3Q9H2K0 278 aaKnown RBP17.28■□□□□ 0.36
NDE1-203ENST00000570727 JMJD4Q9H9V9 463 aa17.28■□□□□ 0.36
NDE1-203ENST00000570727 VAT1LQ9HCJ6 419 aa17.28■□□□□ 0.36
NDE1-203ENST00000570727 CTNNA3Q9UI47 895 aa17.28■□□□□ 0.36
NDE1-203ENST00000570727 MSRAQ9UJ68 235 aa17.28■□□□□ 0.36
NDE1-203ENST00000570727 ADGRE1Q14246 886 aa17.27■□□□□ 0.36
NDE1-203ENST00000570727 TTLL4Q14679 1199 aa17.27■□□□□ 0.36
NDE1-203ENST00000570727 RAB30Q15771 203 aa17.27■□□□□ 0.36
NDE1-203ENST00000570727 BRDTQ58F21 947 aaPredicted RBP17.27■□□□□ 0.36
NDE1-203ENST00000570727 NFRKBQ6P4R8 1299 aa17.27■□□□□ 0.36
NDE1-203ENST00000570727 STAG2Q8N3U4 1231 aa17.27■□□□□ 0.36
NDE1-203ENST00000570727 KRT23Q9C075 422 aa17.27■□□□□ 0.36
NDE1-203ENST00000570727 NKX2-4Q9H2Z4 354 aa17.27■□□□□ 0.36
NDE1-203ENST00000570727 RAD50Q92878 1312 aa17.26■□□□□ 0.35
NDE1-203ENST00000570727 TET1Q8NFU7 2136 aa17.26■□□□□ 0.35
NDE1-203ENST00000570727 PARP1P09874 1014 aaKnown RBP17.26■□□□□ 0.35
NDE1-203ENST00000570727 PDE4AP27815 886 aa17.26■□□□□ 0.35
NDE1-203ENST00000570727 RABGGTBP53611 331 aa17.26■□□□□ 0.35
NDE1-203ENST00000570727 SEC23AQ15436 765 aa17.26■□□□□ 0.35
NDE1-203ENST00000570727 LY6KQ17RY6 165 aa17.26■□□□□ 0.35
NDE1-203ENST00000570727 FAM47CQ5HY64 1035 aa17.26■□□□□ 0.35
NDE1-203ENST00000570727 FBXO11Q86XK2 927 aa17.26■□□□□ 0.35
NDE1-203ENST00000570727 NSUN6Q8TEA1 469 aaKnown RBP17.26■□□□□ 0.35
NDE1-203ENST00000570727 IWS1Q96ST2 819 aa17.26■□□□□ 0.35
NDE1-203ENST00000570727 CNNM2Q9H8M5 875 aa17.26■□□□□ 0.35
NDE1-203ENST00000570727 SLC4A7Q9Y6M7 1214 aa17.26■□□□□ 0.35
NDE1-203ENST00000570727 MYH7BA7E2Y1 1941 aa17.25■□□□□ 0.35
NDE1-203ENST00000570727 MUC3AQ02505 3323 aa17.25■□□□□ 0.35
NDE1-203ENST00000570727 OPLAHO14841 1288 aa17.25■□□□□ 0.35
NDE1-203ENST00000570727 MYOGP15173 224 aa17.25■□□□□ 0.35
NDE1-203ENST00000570727 PTPN11Q06124 597 aaPredicted RBP17.25■□□□□ 0.35
NDE1-203ENST00000570727 SEPT14Q6ZU15 432 aa17.25■□□□□ 0.35
NDE1-203ENST00000570727 CYB5R4Q7L1T6 521 aa17.25■□□□□ 0.35
NDE1-203ENST00000570727 DEFB128Q7Z7B8 93 aa17.25■□□□□ 0.35
NDE1-203ENST00000570727 MCF2L2Q86YR7 1114 aa17.25■□□□□ 0.35
NDE1-203ENST00000570727 AFG1LQ8WV93 481 aa17.25■□□□□ 0.35
NDE1-203ENST00000570727 RMDN3Q96TC7 470 aa17.25■□□□□ 0.35
NDE1-203ENST00000570727 GAS2L1Q99501 681 aaPredicted RBP17.25■□□□□ 0.35
NDE1-203ENST00000570727 SLC28A3Q9HAS3 691 aa17.25■□□□□ 0.35
NDE1-203ENST00000570727 PRDM6Q9NQX0 595 aa17.25■□□□□ 0.35
NDE1-203ENST00000570727 MRPL11Q9Y3B7 192 aaKnown RBP17.25■□□□□ 0.35
NDE1-203ENST00000570727 TTC28Q96AY4 2481 aa17.25■□□□□ 0.35
NDE1-203ENST00000570727 BAZ2BQ9UIF8 2168 aaKnown RBP17.24■□□□□ 0.35
NDE1-203ENST00000570727 PFKMP08237 780 aa17.24■□□□□ 0.35
NDE1-203ENST00000570727 IQCF3P0C7M6 154 aa17.24■□□□□ 0.35
NDE1-203ENST00000570727 GSPT1P15170 499 aaKnown RBP17.24■□□□□ 0.35
NDE1-203ENST00000570727 ARHGAP1Q07960 439 aa17.24■□□□□ 0.35
NDE1-203ENST00000570727 STXBP2Q15833 593 aa17.24■□□□□ 0.35
NDE1-203ENST00000570727 IFIT1BQ5T764 474 aaKnown RBP17.24■□□□□ 0.35
NDE1-203ENST00000570727 KAT2BQ92831 832 aa17.24■□□□□ 0.35
NDE1-203ENST00000570727 MTMR8Q96EF0 704 aa17.24■□□□□ 0.35
NDE1-203ENST00000570727 CTAGE1Q96RT6 745 aa17.24■□□□□ 0.35
NDE1-203ENST00000570727 UBAC1Q9BSL1 405 aa17.24■□□□□ 0.35
NDE1-203ENST00000570727 ZBBXA8MT70 800 aa17.23■□□□□ 0.35
NDE1-203ENST00000570727 KLRF2D3W0D1 207 aa17.23■□□□□ 0.35
NDE1-203ENST00000570727 PITPNM1O00562 1244 aa17.23■□□□□ 0.35
NDE1-203ENST00000570727 DHX16O60231 1041 aaKnown RBP17.23■□□□□ 0.35
NDE1-203ENST00000570727 PPP1R11O60927 126 aaPredicted RBP17.23■□□□□ 0.35
NDE1-203ENST00000570727 GH1P01241 217 aa17.23■□□□□ 0.35
NDE1-203ENST00000570727 MMP3P08254 477 aa17.23■□□□□ 0.35
NDE1-203ENST00000570727 SLC35G1Q2M3R5 365 aa17.23■□□□□ 0.35
NDE1-203ENST00000570727 PPM1EQ8WY54 764 aa17.23■□□□□ 0.35
NDE1-203ENST00000570727 PXMP2Q9NR77 195 aa17.23■□□□□ 0.35
NDE1-203ENST00000570727 MAD2L2Q9UI95 211 aa17.23■□□□□ 0.35
NDE1-203ENST00000570727 DDX41Q9UJV9 622 aaKnown RBP17.23■□□□□ 0.35
NDE1-203ENST00000570727 PCDHA11Q9Y5I1 949 aa17.23■□□□□ 0.35
NDE1-203ENST00000570727 PALM3A6NDB9 673 aaPredicted RBP17.22■□□□□ 0.35
NDE1-203ENST00000570727 EIF3JO75822 258 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms