RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 AK2P54819 239 aa11.35□□□□□ -0.59
GTF3C1-212ENST00000570129 TNFAIP2Q03169 654 aa11.35□□□□□ -0.59
GTF3C1-212ENST00000570129 ST3GAL1Q11201 340 aa11.35□□□□□ -0.59
GTF3C1-212ENST00000570129 KCNA10Q16322 511 aa11.35□□□□□ -0.59
GTF3C1-212ENST00000570129 CCSAPQ6IQ19 270 aaPredicted RBP11.35□□□□□ -0.59
GTF3C1-212ENST00000570129 SYNE3Q6ZMZ3 975 aa11.35□□□□□ -0.59
GTF3C1-212ENST00000570129 SEPT14Q6ZU15 432 aa11.35□□□□□ -0.59
GTF3C1-212ENST00000570129 HEATR3Q7Z4Q2 680 aa11.35□□□□□ -0.59
GTF3C1-212ENST00000570129 DPF3Q92784 378 aa11.35□□□□□ -0.59
GTF3C1-212ENST00000570129 ABHD16BQ9H3Z7 469 aa11.35□□□□□ -0.59
GTF3C1-212ENST00000570129 PXMP2Q9NR77 195 aa11.35□□□□□ -0.59
GTF3C1-212ENST00000570129 FAM184BQ9ULE4 1060 aa11.35□□□□□ -0.59
GTF3C1-212ENST00000570129 PLXNA1Q9UIW2 1896 aa11.35□□□□□ -0.59
GTF3C1-212ENST00000570129 ASB14A6NK59 587 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 GCOM1H8Y6P7 765 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 STXBP3O00186 592 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 CTDNEP1O95476 244 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 NR3C2P08235 984 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 POLR2MP0CAP2 368 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 CALM1P0DP23 149 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 CALM2P0DP24 149 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 CALM3P0DP25 149 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 SYN1P17600 705 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 METAP2P50579 478 aaKnown RBP eCLIP11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 EVCP57679 992 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 MRPS9P82933 396 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 SP2Q02086 613 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 LY6KQ17RY6 165 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 NECAB2Q7Z6G3 386 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 FBXL16Q8N461 479 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 KLHDC9Q8NEP7 349 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 LZTS2Q9BRK4 669 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 WDR11Q9BZH6 1224 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 C11orf49Q9H6J7 331 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 RTEL1Q9NZ71 1219 aa11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 ZMYND8Q9ULU4 1186 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 GNEQ9Y223 722 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-212ENST00000570129 EDIL3O43854 480 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 RARBP10826 455 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 AKR1A1P14550 325 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 SMARCA1P28370 1054 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 GNAQP50148 359 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 NEK4P51957 841 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 PSMC6P62333 389 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 PDE4DQ08499 809 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 SCRN1Q12765 414 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 SEMA3FQ13275 785 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 ARHGEF16Q5VV41 709 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 CCDC62Q6P9F0 684 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 SH3RF1Q7Z6J0 888 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 C7orf61Q8IZ16 206 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 MSL3Q8N5Y2 521 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 PDCD2LQ9BRP1 358 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 SLC26A6Q9BXS9 759 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 RTN4Q9NQC3 1192 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 GRIN2DO15399 1336 aa11.33□□□□□ -0.6
GTF3C1-212ENST00000570129 RBM47A0AV96 593 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 EPB41L2O43491 1005 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 DUSP11O75319 330 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 C6orf222P0C671 652 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 GHRHRQ02643 423 aa11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 PGM5Q15124 567 aa11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 ME3Q16798 604 aa11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 CXCL17Q6UXB2 119 aa11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 VSIG10LQ86VR7 867 aa11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 MCF2L2Q86YR7 1114 aa11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 CYP2W1Q8TAV3 490 aa11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 RASGRP4Q8TDF6 673 aa11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 NSUN6Q8TEA1 469 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 IL17RAQ96F46 866 aa11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 UPF3AQ9H1J1 476 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 PSTPIP2Q9H939 334 aa11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 ADD3Q9UEY8 706 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 NRBP1Q9UHY1 535 aa11.32□□□□□ -0.6
GTF3C1-212ENST00000570129 RBBP6Q7Z6E9 1792 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 DNM1LO00429 736 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 CD2BP2O95400 341 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 ACLYP53396 1101 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 FOSBP53539 338 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 GJA9P57773 515 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 TRIM60Q495X7 471 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 GNASQ5JWF2 1037 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 JAKMIP3Q5VZ66 844 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 IQSEC1Q6DN90 963 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 SLC39A5Q6ZMH5 540 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 ANKLE1Q8NAG6 615 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 DNERQ8NFT8 737 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 VTA1Q9NP79 307 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 RBM28Q9NW13 759 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 VPS54Q9P1Q0 977 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 SEC63Q9UGP8 760 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 PHF24Q9UPV7 400 aa11.31□□□□□ -0.6
GTF3C1-212ENST00000570129 A0A1W2PQ45 241 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 A0A1W2PQY0 241 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 SMCO2A6NFE2 343 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 PRPF3O43395 683 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 JAK2O60674 1132 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 PFKFB2O60825 505 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 ATP9AO75110 1047 aa11.3□□□□□ -0.6
GTF3C1-212ENST00000570129 ASGR1P07306 291 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms