RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 DTWD1Q8N5C7 304 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 GPBAR1Q8TDU6 330 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 TRIM11Q96F44 468 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 LRRC3Q9BY71 257 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 CCDC86Q9H6F5 360 aaKnown RBP7.74□□□□□ -1.17
UBFD1-209ENST00000569919 KCNK4Q9NYG8 393 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 TRIM17Q9Y577 477 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 CLSPNQ9HAW4 1339 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 RTL9Q8NET4 1388 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 A0A0A0MRY4 1105 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 LOC100289279A0A1B0GTE1 492 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 BPNT1O95861 308 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 SOX9P48436 509 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 RPS8P62241 208 aaKnown RBP7.73□□□□□ -1.17
UBFD1-209ENST00000569919 GPSM2P81274 684 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 COL9A2Q14055 689 aaPredicted RBP7.73□□□□□ -1.17
UBFD1-209ENST00000569919 SF3B3Q15393 1217 aaKnown RBP7.73□□□□□ -1.17
UBFD1-209ENST00000569919 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.73□□□□□ -1.17
UBFD1-209ENST00000569919 MOB2Q70IA6 237 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 OTOP1Q7RTM1 612 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 ARMC9Q7Z3E5 817 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 FBXO11Q86XK2 927 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 PLVAPQ9BX97 442 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 MYOZ2Q9NPC6 264 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 KRT82Q9NSB4 513 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 PCDHA4Q9UN74 947 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 PTPN22Q9Y2R2 807 aa7.73□□□□□ -1.17
UBFD1-209ENST00000569919 COL3A1P02461 1466 aaPredicted RBP7.73□□□□□ -1.17
UBFD1-209ENST00000569919 ASTN2O75129 1339 aaPredicted RBP7.73□□□□□ -1.17
UBFD1-209ENST00000569919 MANSC4A6NHS7 340 aaPredicted RBP7.72□□□□□ -1.17
UBFD1-209ENST00000569919 ZNF862O60290 1169 aa7.72□□□□□ -1.17
UBFD1-209ENST00000569919 DLGAP3O95886 979 aa7.72□□□□□ -1.17
UBFD1-209ENST00000569919 LIG1P18858 919 aa7.72□□□□□ -1.17
UBFD1-209ENST00000569919 EN2P19622 333 aaPredicted RBP7.72□□□□□ -1.17
UBFD1-209ENST00000569919 EIF2S2P20042 333 aaKnown RBP7.72□□□□□ -1.17
UBFD1-209ENST00000569919 MMP14P50281 582 aa7.72□□□□□ -1.17
UBFD1-209ENST00000569919 RPL6Q02878 288 aaKnown RBP7.72□□□□□ -1.17
UBFD1-209ENST00000569919 CNGB1Q14028 1251 aaPredicted RBP7.72□□□□□ -1.17
UBFD1-209ENST00000569919 PDE3AQ14432 1141 aa7.72□□□□□ -1.17
UBFD1-209ENST00000569919 CWF19L2Q2TBE0 894 aaKnown RBP7.72□□□□□ -1.17
UBFD1-209ENST00000569919 COPS6Q7L5N1 327 aa7.72□□□□□ -1.17
UBFD1-209ENST00000569919 LRP10Q7Z4F1 713 aa7.72□□□□□ -1.17
UBFD1-209ENST00000569919 REC114Q7Z4M0 266 aa7.72□□□□□ -1.17
UBFD1-209ENST00000569919 FMR1NBQ8N0W7 255 aaPredicted RBP7.72□□□□□ -1.17
UBFD1-209ENST00000569919 SLC17A8Q8NDX2 589 aa7.72□□□□□ -1.17
UBFD1-209ENST00000569919 TBC1D16Q8TBP0 767 aa7.72□□□□□ -1.17
UBFD1-209ENST00000569919 WDR89Q96FK6 387 aaPredicted RBP7.72□□□□□ -1.17
UBFD1-209ENST00000569919 ERO1AQ96HE7 468 aa7.72□□□□□ -1.17
UBFD1-209ENST00000569919 THUMPD2Q9BTF0 503 aaKnown RBP7.72□□□□□ -1.17
UBFD1-209ENST00000569919 R3HDMLQ9H3Y0 253 aa7.72□□□□□ -1.17
UBFD1-209ENST00000569919 ANKRD36CQ5JPF3 1778 aa7.71□□□□□ -1.17
UBFD1-209ENST00000569919 PAPPA2Q9BXP8 1791 aa7.71□□□□□ -1.17
UBFD1-209ENST00000569919 SSBP05455 408 aaKnown RBP eCLIP7.71□□□□□ -1.18
UBFD1-209ENST00000569919 MCM4P33991 863 aa7.71□□□□□ -1.18
UBFD1-209ENST00000569919 CDK8P49336 464 aa7.71□□□□□ -1.18
UBFD1-209ENST00000569919 RAC1P63000 192 aa7.71□□□□□ -1.18
UBFD1-209ENST00000569919 AIMP1Q12904 312 aaKnown RBP7.71□□□□□ -1.18
UBFD1-209ENST00000569919 ARHGEF6Q15052 776 aa7.71□□□□□ -1.18
UBFD1-209ENST00000569919 PRAMEF18Q5VWM3 479 aa7.71□□□□□ -1.18
UBFD1-209ENST00000569919 OTUD7BQ6GQQ9 843 aa7.71□□□□□ -1.18
UBFD1-209ENST00000569919 PODNQ7Z5L7 613 aa7.71□□□□□ -1.18
UBFD1-209ENST00000569919 NBPF11Q86T75 865 aa7.71□□□□□ -1.18
UBFD1-209ENST00000569919 CELF1Q92879 486 aaKnown RBP7.71□□□□□ -1.18
UBFD1-209ENST00000569919 ARMC5Q96C12 935 aa7.71□□□□□ -1.18
UBFD1-209ENST00000569919 BRMS1Q9HCU9 246 aa7.71□□□□□ -1.18
UBFD1-209ENST00000569919 GNB5O14775 395 aa7.7□□□□□ -1.18
UBFD1-209ENST00000569919 HSP90B1P14625 803 aaKnown RBP7.7□□□□□ -1.18
UBFD1-209ENST00000569919 SELPP16109 830 aa7.7□□□□□ -1.18
UBFD1-209ENST00000569919 INPP5AQ14642 412 aa7.7□□□□□ -1.18
UBFD1-209ENST00000569919 UBASH3BQ8TF42 649 aa7.7□□□□□ -1.18
UBFD1-209ENST00000569919 XAGE3Q8WTP9 111 aa7.7□□□□□ -1.18
UBFD1-209ENST00000569919 DNAJC2Q99543 621 aaKnown RBP7.7□□□□□ -1.18
UBFD1-209ENST00000569919 PNNQ9H307 717 aaKnown RBP7.7□□□□□ -1.18
UBFD1-209ENST00000569919 LAMB4A4D0S4 1761 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 SPDYE3A6NKU9 549 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 FAM229AH3BQW9 127 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 WIPF1O43516 503 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 UFL1O94874 794 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 ZNF165P49910 485 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 HNRNPUQ00839 825 aaKnown RBP eCLIP7.69□□□□□ -1.18
UBFD1-209ENST00000569919 TRIM28Q13263 835 aaKnown RBP7.69□□□□□ -1.18
UBFD1-209ENST00000569919 DUOXA2Q1HG44 320 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 NBPF9Q3BBW0 867 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 HP1BP3Q5SSJ5 553 aaPredicted RBP7.69□□□□□ -1.18
UBFD1-209ENST00000569919 GK5Q6ZS86 529 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 CPLX3Q8WVH0 158 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 FAM89AQ96GI7 184 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 BABAM1Q9NWV8 329 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 MKL2Q9ULH7 1088 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 STRIP2Q9ULQ0 834 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 PPT2Q9UMR5 302 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 ZNF609O15014 1411 aa7.69□□□□□ -1.18
UBFD1-209ENST00000569919 DUOX1Q9NRD9 1551 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 GFRA2O00451 464 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 WNT10BO00744 389 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 STK10O94804 968 aaKnown RBP7.68□□□□□ -1.18
UBFD1-209ENST00000569919 ANXA1P04083 346 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 ZBTB48P10074 688 aaPredicted RBP7.68□□□□□ -1.18
UBFD1-209ENST00000569919 SP3Q02447 781 aa7.68□□□□□ -1.18
UBFD1-209ENST00000569919 RBL2Q08999 1139 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms