RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 UBE2Q1Q7Z7E8 422 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 ZNF467Q7Z7K2 595 aaPredicted RBP10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 MCF2L2Q86YR7 1114 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 ARRDC4Q8NCT1 418 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 SYTL5Q8TDW5 730 aaPredicted RBP10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 PPP1R13LQ8WUF5 828 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 RMDN3Q96TC7 470 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 ATP11BQ9Y2G3 1177 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 CYP46A1Q9Y6A2 500 aa10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 MKI67P46013 3256 aaKnown RBP10.44□□□□□ -0.74
GTF3C1-210ENST00000569394 ALPK3Q96L96 1907 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 OPLAHO14841 1288 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 MSCO60682 206 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 HMGB1P09429 215 aaKnown RBP10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 SMPD1P17405 629 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 ADD1P35611 737 aaKnown RBP10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 GNAQP50148 359 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 METAP2P50579 478 aaKnown RBP eCLIP10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 LRRC26Q2I0M4 334 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 HABP4Q5JVS0 413 aaKnown RBP10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 USP17L6PQ6QN14 398 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 TMTC3Q6ZXV5 915 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 RUFY3Q7L099 469 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 MSL3Q8N5Y2 521 aaKnown RBP10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 ANKLE1Q8NAG6 615 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 COPS5Q92905 334 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 KCNB2Q92953 911 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 MTMR8Q96EF0 704 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 KATNBL1Q9H079 304 aa10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 NCOA5Q9HCD5 579 aaKnown RBP10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 V9GY48 417 aaPredicted RBP10.43□□□□□ -0.74
GTF3C1-210ENST00000569394 GCOM1H8Y6P7 765 aaPredicted RBP10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 DNM1LO00429 736 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 POLR2MP0CAP2 368 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 KCNA10Q16322 511 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 UBE2SQ16763 222 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 GNASQ5JWF2 1037 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 TAPT1Q6NXT6 567 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 RNF180Q86T96 592 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 SGMS1Q86VZ5 419 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 SMARCC2Q8TAQ2 1214 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 PGBD1Q96JS3 809 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 LZTS2Q9BRK4 669 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 SPZ1Q9BXG8 430 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 WDR11Q9BZH6 1224 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 PRDM5Q9NQX1 630 aaPredicted RBP10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 PDRG1Q9NUG6 133 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 RTEL1Q9NZ71 1219 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 PNMA2Q9UL42 364 aa10.42□□□□□ -0.74
GTF3C1-210ENST00000569394 CNTNAP5Q8WYK1 1306 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 MYL3P08590 195 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 TOB2Q14106 344 aaPredicted RBP10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 LY6KQ17RY6 165 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 TLK2Q86UE8 772 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 IL31RAQ8NI17 732 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 NSUN6Q8TEA1 469 aaKnown RBP10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 CUL5Q93034 780 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 PHKBQ93100 1093 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 MPHOSPH6Q99547 160 aaKnown RBP10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 MTA3Q9BTC8 594 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 AP5M1Q9H0R1 490 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 SPC25Q9HBM1 224 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 ZSWIM6Q9HCJ5 1215 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 PXMP2Q9NR77 195 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 FAM217BQ9NTX9 383 aaPredicted RBP10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 RBM28Q9NW13 759 aaKnown RBP10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 NRBP1Q9UHY1 535 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 GTF3C3Q9Y5Q9 886 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 LRRC37A2A6NM11 1700 aa10.41□□□□□ -0.74
GTF3C1-210ENST00000569394 PQBP1O60828 265 aaKnown RBP10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 ADAMTS4O75173 837 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 DUSP11O75319 330 aaKnown RBP10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 ARIH2O95376 493 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 ASGR1P07306 291 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 NR3C2P08235 984 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 TXNP10599 105 aaKnown RBP10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 COL6A1P12109 1028 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 NAPAP54920 295 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 RTP1P59025 263 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 PSMC6P62333 389 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 TRIM60Q495X7 471 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 WWC2Q6AWC2 1192 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 CXCL17Q6UXB2 119 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 CHRDL2Q6WN34 429 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 RGS22Q8NE09 1264 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 DNERQ8NFT8 737 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 OR6J1Q8NGC5 347 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 UIMC1Q96RL1 719 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 MAP3K14Q99558 947 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 SLC26A6Q9BXS9 759 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 VTA1Q9NP79 307 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 PKD2L1Q9P0L9 805 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 NR2E3Q9Y5X4 410 aa10.4□□□□□ -0.74
GTF3C1-210ENST00000569394 A0A1W2PQ45 241 aaPredicted RBP10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 A0A1W2PQY0 241 aa10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 PDIA3P30101 505 aaKnown RBP10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 HSD17B4P51659 736 aa10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 ACLYP53396 1101 aa10.39□□□□□ -0.75
GTF3C1-210ENST00000569394 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms