RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 ARHGEF16Q5VV41 709 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 IQSEC1Q6DN90 963 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 NOL8Q76FK4 1167 aaKnown RBP11.33□□□□□ -0.6
CLN6-209ENST00000569336 TLK2Q86UE8 772 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 RAB11FIP4Q86YS3 637 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 TEX2Q8IWB9 1127 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 SRBD1Q8N5C6 995 aaKnown RBP11.33□□□□□ -0.6
CLN6-209ENST00000569336 PCSK9Q8NBP7 692 aaKnown RBP11.33□□□□□ -0.6
CLN6-209ENST00000569336 SYTL5Q8TDW5 730 aaPredicted RBP11.33□□□□□ -0.6
CLN6-209ENST00000569336 SCFD2Q8WU76 684 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 PIBF1Q8WXW3 757 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 TSEN34Q9BSV6 310 aaKnown RBP11.33□□□□□ -0.6
CLN6-209ENST00000569336 AP5M1Q9H0R1 490 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 UPF3AQ9H1J1 476 aaKnown RBP11.33□□□□□ -0.6
CLN6-209ENST00000569336 ZSWIM6Q9HCJ5 1215 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 PXMP2Q9NR77 195 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 BRPF3Q9ULD4 1205 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 GBF1Q92538 1859 aa11.33□□□□□ -0.6
CLN6-209ENST00000569336 OPLAHO14841 1288 aa11.32□□□□□ -0.6
CLN6-209ENST00000569336 NKRFO15226 690 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLN6-209ENST00000569336 PGK1P00558 417 aa11.32□□□□□ -0.6
CLN6-209ENST00000569336 ADCYAP1R1P41586 468 aa11.32□□□□□ -0.6
CLN6-209ENST00000569336 GJA9P57773 515 aa11.32□□□□□ -0.6
CLN6-209ENST00000569336 APOBRQ0VD83 1088 aa11.32□□□□□ -0.6
CLN6-209ENST00000569336 STXBP2Q15833 593 aa11.32□□□□□ -0.6
CLN6-209ENST00000569336 BRDTQ58F21 947 aaPredicted RBP11.32□□□□□ -0.6
CLN6-209ENST00000569336 PPP1R18Q6NYC8 613 aa11.32□□□□□ -0.6
CLN6-209ENST00000569336 EEPD1Q7L9B9 569 aa11.32□□□□□ -0.6
CLN6-209ENST00000569336 LENG1Q96BZ8 264 aaPredicted RBP11.32□□□□□ -0.6
CLN6-209ENST00000569336 PURBQ96QR8 312 aaKnown RBP11.32□□□□□ -0.6
CLN6-209ENST00000569336 SENP6Q9GZR1 1112 aaPredicted RBP11.32□□□□□ -0.6
CLN6-209ENST00000569336 PHF24Q9UPV7 400 aa11.32□□□□□ -0.6
CLN6-209ENST00000569336 Q9Y3F1 56 aa11.32□□□□□ -0.6
CLN6-209ENST00000569336 SCN5AQ14524 2016 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 PIK3CDO00329 1044 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 ADCY6O43306 1168 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 ZEB2O60315 1214 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 EIF2AK2P19525 551 aaKnown RBP11.31□□□□□ -0.6
CLN6-209ENST00000569336 CPT1AP50416 773 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 TTLL4Q14679 1199 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 DUSP28Q4G0W2 176 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 TAPT1Q6NXT6 567 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 HEATR3Q7Z4Q2 680 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 C7orf61Q8IZ16 206 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 CMTR1Q8N1G2 835 aaKnown RBP11.31□□□□□ -0.6
CLN6-209ENST00000569336 CCDC82Q8N4S0 544 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 SMARCC2Q8TAQ2 1214 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 GLT1D1Q96MS3 346 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 WDR11Q9BZH6 1224 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 COL20A1Q9P218 1284 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 EVPLQ92817 2033 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 FRMPD4Q14CM0 1322 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 MROH7Q68CQ1 1323 aa11.31□□□□□ -0.6
CLN6-209ENST00000569336 LAMA3Q16787 3333 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 A0A1W2PQ45 241 aaPredicted RBP11.3□□□□□ -0.6
CLN6-209ENST00000569336 A0A1W2PQY0 241 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 RBM47A0AV96 593 aaKnown RBP11.3□□□□□ -0.6
CLN6-209ENST00000569336 EIF3JO75822 258 aaKnown RBP11.3□□□□□ -0.6
CLN6-209ENST00000569336 STAM2O75886 525 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 CCND2P30279 289 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 HOXA13P31271 388 aaPredicted RBP11.3□□□□□ -0.6
CLN6-209ENST00000569336 ACLYP53396 1101 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 EVCP57679 992 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 NKX3-2P78367 333 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 AKAP17AQ02040 695 aaKnown RBP11.3□□□□□ -0.6
CLN6-209ENST00000569336 ANKRD1Q15327 319 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 FSCN1Q16658 493 aaKnown RBP11.3□□□□□ -0.6
CLN6-209ENST00000569336 GNASQ5JWF2 1037 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 C1orf53Q5VUE5 145 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 KCNV1Q6PIU1 500 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 FCHSD1Q86WN1 690 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 KLHDC9Q8NEP7 349 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 CCDC12Q8WUD4 166 aaPredicted RBP11.3□□□□□ -0.6
CLN6-209ENST00000569336 TBC1D5Q92609 795 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 TAAR1Q96RJ0 339 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 UPF3BQ9BZI7 483 aaKnown RBP11.3□□□□□ -0.6
CLN6-209ENST00000569336 GLT8D2Q9H1C3 349 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 EHMT1Q9H9B1 1298 aa11.3□□□□□ -0.6
CLN6-209ENST00000569336 GNEQ9Y223 722 aaKnown RBP11.3□□□□□ -0.6
CLN6-209ENST00000569336 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.29□□□□□ -0.6
CLN6-209ENST00000569336 CABYRO75952 493 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 NR3C2P08235 984 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 TXNP10599 105 aaKnown RBP11.29□□□□□ -0.6
CLN6-209ENST00000569336 SMPD1P17405 629 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 NAPAP54920 295 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 SNX17Q15036 470 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 PGM5Q15124 567 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 KCNA10Q16322 511 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 LRRC26Q2I0M4 334 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 GNPTABQ3T906 1256 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 CPLX2Q6PUV4 134 aaKnown RBP11.29□□□□□ -0.6
CLN6-209ENST00000569336 TRIM22Q8IYM9 498 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 OR6J1Q8NGC5 347 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.6
CLN6-209ENST00000569336 FERMT2Q96AC1 680 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 PDCD2LQ9BRP1 358 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 PSTPIP2Q9H939 334 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 STARD7Q9NQZ5 370 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 PDGFCQ9NRA1 345 aa11.29□□□□□ -0.6
CLN6-209ENST00000569336 PDRG1Q9NUG6 133 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms