RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ABCC12Q96J65 1359 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 VWA3AA6NCI4 1184 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 H0YCG3 227 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 STX1BP61266 288 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 ORC2Q13416 577 aaPredicted RBP7.71□□□□□ -1.17
CNOT1-216ENST00000569240 MCM10Q7L590 875 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 KLHL23Q8NBE8 558 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 B4GALNT2Q8NHY0 566 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 CFAP36Q96G28 342 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 TRAIPQ9BWF2 469 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 SNX5Q9Y5X3 404 aa7.71□□□□□ -1.17
CNOT1-216ENST00000569240 TULP2O00295 520 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 TRIM66O15016 1216 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 ZMYM6O95789 1325 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 STAT2P52630 851 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 CLASP1Q7Z460 1538 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 LINC00301Q8NCQ3 95 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.71□□□□□ -1.18
CNOT1-216ENST00000569240 MAP4K1Q92918 833 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 NUDT16Q96DE0 195 aaKnown RBP7.71□□□□□ -1.18
CNOT1-216ENST00000569240 CSRNP1Q96S65 589 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 ETNK1Q9HBU6 452 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 TRAF3IP3Q9Y228 551 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 ADGRG1Q9Y653 693 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 DIAPH2O60879 1101 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 S100A1P23297 94 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 CEP55Q53EZ4 464 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 DDHD1Q8NEL9 900 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 DDX54Q8TDD1 881 aaKnown RBP7.71□□□□□ -1.18
CNOT1-216ENST00000569240 ECT2Q9H8V3 914 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 NOD2Q9HC29 1040 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 TMOD2Q9NZR1 351 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 SERTAD1Q9UHV2 236 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 ZFP69BQ9UJL9 534 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 DBNLQ9UJU6 430 aaKnown RBP7.71□□□□□ -1.18
CNOT1-216ENST00000569240 TRIM33Q9UPN9 1127 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 AGTPBP1Q9UPW5 1226 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 KCNA3P22001 575 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 IQCB1Q15051 598 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 MAPRE2Q15555 327 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 ZNF658Q5TYW1 1059 aaPredicted RBP7.71□□□□□ -1.18
CNOT1-216ENST00000569240 IRGCQ6NXR0 463 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 MYOCDQ8IZQ8 938 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 THAP11Q96EK4 314 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 SPC25Q9HBM1 224 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 ZMYND8Q9ULU4 1186 aaPredicted RBP7.71□□□□□ -1.18
CNOT1-216ENST00000569240 ATP11BQ9Y2G3 1177 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 PCDHA5Q9Y5H7 936 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 BIVM-ERCC5R4GMW8 1640 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 DUOX2Q9NRD8 1548 aa7.71□□□□□ -1.18
CNOT1-216ENST00000569240 INHBAP08476 426 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 SCG2P13521 617 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 ARID5AQ03989 594 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 KLHL38Q2WGJ6 581 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 ATP6V0A1Q93050 837 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 PHKBQ93100 1093 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 SH3GL2Q99962 352 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 ELAC2Q9BQ52 826 aaKnown RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 LARP6Q9BRS8 491 aaKnown RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 PLXNC1O60486 1568 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 IQGAP2Q13576 1575 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 PDE5AO76074 875 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 XRCC5P13010 732 aaKnown RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 MAP3K10Q02779 954 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 NONOQ15233 471 aaKnown RBP eCLIP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 HADHQ16836 314 aaKnown RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 PCGF5Q86SE9 256 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 TRIM31Q9BZY9 425 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 CABP5Q9NP86 173 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 RAB20Q9NX57 234 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 ADGRL2O95490 1459 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 hCG_1984214I3L0E3 225 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 CTCFP49711 727 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 C16orf71Q8IYS4 520 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 PDZD8Q8NEN9 1154 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 BHMT2Q9H2M3 363 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 TRPC6Q9Y210 931 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 DNMBPQ6XZF7 1577 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 CRCPO75575 148 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 SNRPA1P09661 255 aaKnown RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 GSPT1P15170 499 aaKnown RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 PRLRP16471 622 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 CUL4BQ13620 913 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 KRT81Q14533 505 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 CCNI2Q6ZMN8 369 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 TRMT10CQ7L0Y3 403 aaKnown RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 SPATA21Q7Z572 469 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 SETD3Q86TU7 594 aaPredicted RBP7.7□□□□□ -1.18
CNOT1-216ENST00000569240 KIAA2013Q8IYS2 634 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 LRRC43Q8N309 656 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 USP33Q8TEY7 942 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 GIPC2Q8TF65 315 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 CNBD2Q96M20 576 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 DCLRE1BQ9H816 532 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 CCDC159P0C7I6 412 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 MARK3P27448 753 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 CHRNA3P32297 505 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 LSP1P33241 339 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 SERPINB8P50452 374 aa7.7□□□□□ -1.18
CNOT1-216ENST00000569240 LRRC63Q05C16 580 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms