RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 ZKSCAN2Q63HK3 967 aa9.92□□□□□ -0.82
CDH11-216ENST00000569128 Q6ZS46 218 aa9.92□□□□□ -0.82
CDH11-216ENST00000569128 AMIGO3Q86WK7 504 aa9.92□□□□□ -0.82
CDH11-216ENST00000569128 RNF214Q8ND24 703 aa9.92□□□□□ -0.82
CDH11-216ENST00000569128 ANAPC16Q96DE5 110 aa9.92□□□□□ -0.82
CDH11-216ENST00000569128 WNT10AQ9GZT5 417 aa9.92□□□□□ -0.82
CDH11-216ENST00000569128 TMX1Q9H3N1 280 aa9.92□□□□□ -0.82
CDH11-216ENST00000569128 FAM105AQ9NUU6 356 aa9.92□□□□□ -0.82
CDH11-216ENST00000569128 ZNRF3Q9ULT6 936 aa9.92□□□□□ -0.82
CDH11-216ENST00000569128 MYH14Q7Z406 1995 aaKnown RBP9.92□□□□□ -0.82
CDH11-216ENST00000569128 KRBA1A5PL33 1030 aa9.91□□□□□ -0.82
CDH11-216ENST00000569128 RNF225M0QZC1 329 aaPredicted RBP9.91□□□□□ -0.82
CDH11-216ENST00000569128 FANCGO15287 622 aa9.91□□□□□ -0.82
CDH11-216ENST00000569128 KLF4O43474 513 aa9.91□□□□□ -0.82
CDH11-216ENST00000569128 ATE1O95260 518 aa9.91□□□□□ -0.82
CDH11-216ENST00000569128 PDE4BQ07343 736 aa9.91□□□□□ -0.82
CDH11-216ENST00000569128 RAB33AQ14088 237 aa9.91□□□□□ -0.82
CDH11-216ENST00000569128 ATF7IPQ6VMQ6 1270 aa9.91□□□□□ -0.82
CDH11-216ENST00000569128 CAMKK2Q96RR4 588 aa9.91□□□□□ -0.82
CDH11-216ENST00000569128 UBL7Q96S82 380 aaPredicted RBP9.91□□□□□ -0.82
CDH11-216ENST00000569128 CRBNQ96SW2 442 aa9.91□□□□□ -0.82
CDH11-216ENST00000569128 PIDD1Q9HB75 910 aa9.91□□□□□ -0.82
CDH11-216ENST00000569128 HYPKQ9NX55 129 aa9.91□□□□□ -0.82
CDH11-216ENST00000569128 STK17AQ9UEE5 414 aa9.91□□□□□ -0.82
CDH11-216ENST00000569128 PRKAB1Q9Y478 270 aa9.91□□□□□ -0.82
CDH11-216ENST00000569128 KIF16BQ96L93 1317 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 PI4KAP2A4QPH2 592 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 IPO8O15397 1037 aaKnown RBP9.9□□□□□ -0.82
CDH11-216ENST00000569128 GAS2O43903 313 aaKnown RBP9.9□□□□□ -0.82
CDH11-216ENST00000569128 RNGTTO60942 597 aaKnown RBP9.9□□□□□ -0.82
CDH11-216ENST00000569128 DNAJC6O75061 913 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 NTF4P34130 210 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 ETFBP38117 255 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 EIF6P56537 245 aaKnown RBP9.9□□□□□ -0.82
CDH11-216ENST00000569128 CCDC181Q5TID7 509 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 TMEM57Q8N5G2 664 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 PI4KAP1Q8N8J0 262 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.9□□□□□ -0.82
CDH11-216ENST00000569128 EXOC6Q8TAG9 804 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 ARHGAP45Q92619 1136 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 SHDQ96IW2 340 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 GSX1Q9H4S2 264 aaPredicted RBP9.9□□□□□ -0.82
CDH11-216ENST00000569128 ANTXR1Q9H6X2 564 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 SPC25Q9HBM1 224 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 PCDH12Q9NPG4 1184 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 SNTG2Q9NY99 539 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 EP400Q96L91 3159 aa9.9□□□□□ -0.82
CDH11-216ENST00000569128 COL5A3P25940 1745 aaPredicted RBP9.9□□□□□ -0.83
CDH11-216ENST00000569128 ADCY9O60503 1353 aa9.89□□□□□ -0.83
CDH11-216ENST00000569128 CNTNAP4Q9C0A0 1308 aa9.89□□□□□ -0.83
CDH11-216ENST00000569128 CHRNA4P43681 627 aa9.89□□□□□ -0.83
CDH11-216ENST00000569128 USP11P51784 963 aa9.89□□□□□ -0.83
CDH11-216ENST00000569128 EIF5P55010 431 aaKnown RBP9.89□□□□□ -0.83
CDH11-216ENST00000569128 RASA3Q14644 834 aa9.89□□□□□ -0.83
CDH11-216ENST00000569128 SLC4A10Q6U841 1118 aa9.89□□□□□ -0.83
CDH11-216ENST00000569128 UBE3DQ7Z6J8 389 aa9.89□□□□□ -0.83
CDH11-216ENST00000569128 TXNRD3Q86VQ6 643 aa9.89□□□□□ -0.83
CDH11-216ENST00000569128 DZIP1LQ8IYY4 767 aaKnown RBP9.89□□□□□ -0.83
CDH11-216ENST00000569128 ISL2Q96A47 359 aa9.89□□□□□ -0.83
CDH11-216ENST00000569128 MEGF10Q96KG7 1140 aa9.89□□□□□ -0.83
CDH11-216ENST00000569128 API5Q9BZZ5 524 aaKnown RBP9.89□□□□□ -0.83
CDH11-216ENST00000569128 MAP3K2Q9Y2U5 619 aa9.89□□□□□ -0.83
CDH11-216ENST00000569128 ZNF831Q5JPB2 1677 aa9.89□□□□□ -0.83
CDH11-216ENST00000569128 CICQ96RK0 1608 aaPredicted RBP9.89□□□□□ -0.83
CDH11-216ENST00000569128 TAF1LQ8IZX4 1826 aa9.89□□□□□ -0.83
CDH11-216ENST00000569128 PTPRCP08575 1304 aa9.88□□□□□ -0.83
CDH11-216ENST00000569128 RREB1Q92766 1687 aa9.88□□□□□ -0.83
CDH11-216ENST00000569128 RPS6KA4O75676 772 aa9.88□□□□□ -0.83
CDH11-216ENST00000569128 IMPDH2P12268 514 aa9.88□□□□□ -0.83
CDH11-216ENST00000569128 RAB6AP20340 208 aa9.88□□□□□ -0.83
CDH11-216ENST00000569128 IL6STP40189 918 aaPredicted RBP9.88□□□□□ -0.83
CDH11-216ENST00000569128 HLFQ16534 295 aa9.88□□□□□ -0.83
CDH11-216ENST00000569128 ZNF827Q17R98 1081 aa9.88□□□□□ -0.83
CDH11-216ENST00000569128 KSR2Q6VAB6 950 aa9.88□□□□□ -0.83
CDH11-216ENST00000569128 ZNF507Q8TCN5 953 aa9.88□□□□□ -0.83
CDH11-216ENST00000569128 FAM46AQ96IP4 442 aaKnown RBP9.88□□□□□ -0.83
CDH11-216ENST00000569128 DEPDC7Q96QD5 511 aa9.88□□□□□ -0.83
CDH11-216ENST00000569128 FBRSQ9HAH7 460 aa9.88□□□□□ -0.83
CDH11-216ENST00000569128 SSU72Q9NP77 194 aaKnown RBP9.88□□□□□ -0.83
CDH11-216ENST00000569128 KLHL3Q9UH77 587 aa9.88□□□□□ -0.83
CDH11-216ENST00000569128 ABCC4O15439 1325 aa9.87□□□□□ -0.83
CDH11-216ENST00000569128 CACNA1FO60840 1977 aa9.87□□□□□ -0.83
CDH11-216ENST00000569128 DNAJA2O60884 412 aa9.87□□□□□ -0.83
CDH11-216ENST00000569128 GIPRP48546 466 aa9.87□□□□□ -0.83
CDH11-216ENST00000569128 TMEM201Q5SNT2 666 aa9.87□□□□□ -0.83
CDH11-216ENST00000569128 CDPF1Q6NVV7 123 aa9.87□□□□□ -0.83
CDH11-216ENST00000569128 CDC37L1Q7L3B6 337 aa9.87□□□□□ -0.83
CDH11-216ENST00000569128 CD163Q86VB7 1156 aa9.87□□□□□ -0.83
CDH11-216ENST00000569128 FTSJ3Q8IY81 847 aaKnown RBP9.87□□□□□ -0.83
CDH11-216ENST00000569128 SMYD4Q8IYR2 804 aaPredicted RBP9.87□□□□□ -0.83
CDH11-216ENST00000569128 FAM169BQ8N8A8 192 aa9.87□□□□□ -0.83
CDH11-216ENST00000569128 DNAAF4Q8WXU2 420 aa9.87□□□□□ -0.83
CDH11-216ENST00000569128 ACSF2Q96CM8 615 aaPredicted RBP9.87□□□□□ -0.83
CDH11-216ENST00000569128 SLKQ9H2G2 1235 aaPredicted RBP9.87□□□□□ -0.83
CDH11-216ENST00000569128 SRP68Q9UHB9 627 aaKnown RBP9.87□□□□□ -0.83
CDH11-216ENST00000569128 ADAM30Q9UKF2 790 aa9.87□□□□□ -0.83
CDH11-216ENST00000569128 C4BP0C0L5 1744 aa9.87□□□□□ -0.83
CDH11-216ENST00000569128 C1QTNF9BB2RNN3 333 aa9.86□□□□□ -0.83
CDH11-216ENST00000569128 PPP1R12AO14974 1030 aaPredicted RBP9.86□□□□□ -0.83
CDH11-216ENST00000569128 NKG7Q16617 165 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms