RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SRSF3P84103 164 aaKnown RBP5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 RAB3GAP1Q15042 981 aa5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 SLC35F1Q5T1Q4 408 aa5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 YOD1Q5VVQ6 348 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 NBPF6Q5VWK0 638 aa5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 BICRALQ6AI39 1079 aa5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 BHLHE22Q8NFJ8 381 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 KCNN1Q92952 543 aa5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 NBPF4Q96M43 638 aa5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 HIRIP3Q9BW71 556 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 CNTD2Q9H8S5 307 aa5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 RXFP1Q9HBX9 757 aa5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 MBD1Q9UIS9 605 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 PLA2G2DQ9UNK4 145 aa5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 TTBK1Q5TCY1 1321 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 KDM6BO15054 1643 aa5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 TRBV23OR9-2A0A075B6M9 112 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 TEX51A0A1B0GUA7 166 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 FAM221BA6H8Z2 402 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 HRKO00198 91 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 U2SURPO15042 1029 aaKnown RBP5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 PDPK1O15530 556 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 SRGAP3O43295 1099 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 DLX3O60479 287 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 TSPAN15O95858 294 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 MED14OSP0DP75 135 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 LCP1P13796 627 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 GLDCP23378 1020 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 EPHB3P54753 998 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 DLG4P78352 724 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 GRIN2AQ12879 1464 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 SHROOM2Q13796 1616 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 RASGRF1Q13972 1273 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 RASA3Q14644 834 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 CBX2Q14781 532 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 PLEKHN1Q494U1 663 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 ATG14Q6ZNE5 492 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 PLEKHO2Q8TD55 490 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 SGSM3Q96HU1 749 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 IER2Q9BTL4 223 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 CCDC113Q9H0I3 377 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 SIRPGQ9P1W8 387 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 FBXL7Q9UJT9 491 aa5.1□□□□□ -1.59
HMGB1P6-201ENST00000569046 A0A1W2PQJ5 194 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 ZC3H12DA2A288 527 aaKnown RBP5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 AGRPO00253 132 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 NPHS1O60500 1241 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 CPP00450 1065 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 CYBBP04839 570 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 TMEM253P0C7T8 217 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 RAP1GAPP47736 663 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 CDR1P51861 262 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 HSP90AA2PQ14568 343 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 SF3A1Q15459 793 aaKnown RBP5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 TESK1Q15569 626 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 E4F1Q66K89 784 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 TMEM132EQ6IEE7 984 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 TMC6Q7Z403 805 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 TEX2Q8IWB9 1127 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 PPIL6Q8IXY8 311 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 LZTR1Q8N653 840 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 RCBTB1Q8NDN9 531 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 PMFBP1Q8TBY8 1022 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 SREK1Q8WXA9 508 aaKnown RBP5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 OSBP2Q969R2 916 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 CCDC140Q96MF4 163 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 PPP1R16BQ96T49 567 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 DNAJC2Q99543 621 aaKnown RBP5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 CD320Q9NPF0 282 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 BTG4Q9NY30 223 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 MARCH2Q9P0N8 246 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 PFDN2Q9UHV9 154 aa5.09□□□□□ -1.59
HMGB1P6-201ENST00000569046 ADAMTS12P58397 1594 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 NFIBO00712 420 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 MEFVO15553 781 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 ADCY3O60266 1144 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 DIAPH1O60610 1272 aaKnown RBP5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 SEMA7AO75326 666 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 FUCA1P04066 466 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 YBX3P16989 372 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 FPR2P25090 351 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 MAPKAPK2P49137 400 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 NR1I3Q14994 352 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 PKN1Q16512 942 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 ACBD5Q5T8D3 534 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 PAQR3Q6TCH7 311 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 NLRP10Q86W26 655 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 DIO2Q92813 273 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 AARSD1Q9BTE6 412 aaKnown RBP5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 SPATA9Q9BWV2 254 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 BCAS3Q9H6U6 928 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 SIRT5Q9NXA8 310 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 SNTG2Q9NY99 539 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 SMG5Q9UPR3 1016 aaKnown RBP5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 SIT1Q9Y3P8 196 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 DIP2BQ9P265 1576 aa5.08□□□□□ -1.6
HMGB1P6-201ENST00000569046 PRG4Q92954 1404 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P6-201ENST00000569046 IQCA1LA6NCM1 817 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms