RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 IRS2Q9Y4H2 1338 aa13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 POTEMA6NI47 508 aa13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 POTEB2H3BUK9 544 aa13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 TATDN1Q6P1N9 297 aa13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 CNNM4Q6P4Q7 775 aa13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 AGBL1Q96MI9 1066 aa13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 IFNKQ9P0W0 207 aa13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 ROBO3Q96MS0 1386 aa13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 STAT3P40763 770 aa13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 MAP1SQ66K74 1059 aaPredicted RBP13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 FAM114A1Q8IWE2 563 aa13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 ZNF579Q8NAF0 562 aaKnown RBP13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 GINM1Q9NU53 330 aa13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 PPP2R3BQ9Y5P8 575 aa13.57□□□□□ -0.24
TMEM170A-205ENST00000568559 PP2D1A8MPX8 630 aa13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 NOP56O00567 594 aaKnown RBP13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 GTPBP6O43824 516 aaPredicted RBP13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 BACE1P56817 501 aa13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 MNS1Q8NEH6 495 aa13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 GLIS2Q9BZE0 524 aaPredicted RBP13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 FBXO2Q9UK22 296 aaPredicted RBP13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 ABT1Q9ULW3 272 aaKnown RBP13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 GPBP1Q86WP2 473 aa13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 CAGE1Q8TC20 777 aa13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 ATG4CQ96DT6 458 aa13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 NFE2L3Q9Y4A8 694 aa13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 FZD9O00144 591 aa13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 EGFRP00533 1210 aa13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 PLCG1P19174 1290 aa13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 CCNA1P78396 465 aa13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 ODF2Q5BJF6 829 aa13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 EEPD1Q7L9B9 569 aa13.56□□□□□ -0.24
TMEM170A-205ENST00000568559 BICDL2A1A5D9 508 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 FDX1P10109 184 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 SPAG1Q07617 926 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 MKL1Q969V6 931 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 ESYT2A0FGR8 921 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 ESPNB1AK53 854 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 MEIS1O00470 390 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 SSR1P43307 286 aaKnown RBP13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 DPCR1Q3MIW9 517 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 DNAJC18Q9H819 358 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 TOB1P50616 345 aaPredicted RBP13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 LARP4BQ92615 738 aaKnown RBP13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 GTPBP4Q9BZE4 634 aaKnown RBP13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 ZSWIM4Q9H7M6 989 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 PNMA3Q9UL41 463 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 RPN1P04843 607 aaKnown RBP13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 TAL1P17542 331 aaPredicted RBP13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 PAK1Q13153 545 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 SEPT14Q6ZU15 432 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 USP49Q70CQ1 688 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 MTMR14Q8NCE2 650 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 BICD1Q96G01 975 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 GMLQ99445 158 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 DISC1Q9NRI5 854 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 RABGAP1Q9Y3P9 1069 aa13.55□□□□□ -0.24
TMEM170A-205ENST00000568559 A0A1W2PRG0 241 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 VCAM1P19320 739 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 USP11P51784 963 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 GRIN1Q05586 938 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 EARS2Q5JPH6 523 aaKnown RBP13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 CCDC186Q7Z3E2 898 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 MLXIPQ9HAP2 919 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 ADD3Q9UEY8 706 aaKnown RBP13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 COL5A3P25940 1745 aaPredicted RBP13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 TBC1D12O60347 775 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 CASP1P29466 404 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 ZNF280AP59817 542 aaPredicted RBP13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 PAF1Q8N7H5 531 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 VTI1AQ96AJ9 217 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 PAGE5Q96GU1 130 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 CTAGE1Q96RT6 745 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 SYNRGQ9UMZ2 1314 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 COBLO75128 1261 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 ARID5AQ03989 594 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 MCM6Q14566 821 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 FASTKD5Q7L8L6 764 aaKnown RBP13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 WDR11Q9BZH6 1224 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 TMEM60Q9H2L4 133 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 RRAGCQ9HB90 399 aa13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 RNF216Q9NWF9 866 aaPredicted RBP13.54□□□□□ -0.24
TMEM170A-205ENST00000568559 TRAF5O00463 557 aa13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 CCND2P30279 289 aa13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 PTGER2P43116 358 aa13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 TYW1BQ6NUM6 668 aa13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 C11orf57Q6ZUT1 292 aaPredicted RBP13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 DPP9Q86TI2 863 aa13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 SMYD4Q8IYR2 804 aaPredicted RBP13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 MYCT1Q8N699 235 aa13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 DAGLBQ8NCG7 672 aa13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 RGS22Q8NE09 1264 aa13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 TEX13BQ9BXU2 312 aa13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 CELF2O95319 508 aaKnown RBP13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 PTPN21Q16825 1174 aa13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 USP50Q70EL3 339 aaPredicted RBP13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 ZSCAN30Q86W11 494 aa13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 NELFCDQ8IXH7 590 aa13.53□□□□□ -0.24
TMEM170A-205ENST00000568559 NELFBQ8WX92 580 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms