RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 TLL1O43897 1013 aa13.31□□□□□ -0.28
SPG7-216ENST00000567138 PLA2G6O60733 806 aa13.31□□□□□ -0.28
SPG7-216ENST00000567138 ZFYP08048 801 aaPredicted RBP13.31□□□□□ -0.28
SPG7-216ENST00000567138 CPT1AP50416 773 aa13.31□□□□□ -0.28
SPG7-216ENST00000567138 GRB10Q13322 594 aa13.31□□□□□ -0.28
SPG7-216ENST00000567138 BAATQ14032 418 aaPredicted RBP13.31□□□□□ -0.28
SPG7-216ENST00000567138 NBPF20Q3BBV1 942 aa13.31□□□□□ -0.28
SPG7-216ENST00000567138 RCSD1Q6JBY9 416 aa13.31□□□□□ -0.28
SPG7-216ENST00000567138 HERC6Q8IVU3 1022 aa13.31□□□□□ -0.28
SPG7-216ENST00000567138 GPATCH3Q96I76 525 aa13.31□□□□□ -0.28
SPG7-216ENST00000567138 MTG1Q9BT17 334 aaPredicted RBP13.31□□□□□ -0.28
SPG7-216ENST00000567138 NACAP1Q9BZK3 213 aa13.31□□□□□ -0.28
SPG7-216ENST00000567138 GPHNQ9NQX3 736 aaPredicted RBP13.31□□□□□ -0.28
SPG7-216ENST00000567138 MUC6Q6W4X9 2439 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 PTPDC1A2A3K4 754 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 TSPY2A6NKD2 308 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 ICAM1P05362 532 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 SLC3A2P08195 630 aaKnown RBP13.3□□□□□ -0.28
SPG7-216ENST00000567138 IQCF3P0C7M6 154 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 RFC2P35250 354 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 SLC16A2P36021 539 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 CACNB1Q02641 598 aaPredicted RBP13.3□□□□□ -0.28
SPG7-216ENST00000567138 CTDSPL2Q05D32 466 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 TMEM31Q5JXX7 168 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 ERICH6BQ5W0A0 696 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 TTBK2Q6IQ55 1244 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 SLC30A10Q6XR72 485 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 GDPD5Q8WTR4 605 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 COPS5Q92905 334 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 HLA-CQ95604 372 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 INCENPQ9NQS7 918 aa13.3□□□□□ -0.28
SPG7-216ENST00000567138 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.3□□□□□ -0.28
SPG7-216ENST00000567138 MICAL3Q7RTP6 2002 aa13.29□□□□□ -0.28
SPG7-216ENST00000567138 NLRC5Q86WI3 1866 aa13.29□□□□□ -0.28
SPG7-216ENST00000567138 RBAK-RBAKDNI3L0D1 243 aa13.29□□□□□ -0.28
SPG7-216ENST00000567138 CALML3P27482 149 aa13.29□□□□□ -0.28
SPG7-216ENST00000567138 CHMP4BP1P59074 171 aa13.29□□□□□ -0.28
SPG7-216ENST00000567138 PPP2R5BQ15173 497 aa13.29□□□□□ -0.28
SPG7-216ENST00000567138 TMCO2Q7Z6W1 182 aaPredicted RBP13.29□□□□□ -0.28
SPG7-216ENST00000567138 RETREG2Q8NC44 543 aa13.29□□□□□ -0.28
SPG7-216ENST00000567138 PHOSPHO2Q8TCD6 241 aa13.29□□□□□ -0.28
SPG7-216ENST00000567138 RANBP17Q9H2T7 1088 aaKnown RBP13.29□□□□□ -0.28
SPG7-216ENST00000567138 IL17RBQ9NRM6 502 aa13.29□□□□□ -0.28
SPG7-216ENST00000567138 ADD3Q9UEY8 706 aaKnown RBP13.29□□□□□ -0.28
SPG7-216ENST00000567138 RBM47A0AV96 593 aaKnown RBP13.28□□□□□ -0.28
SPG7-216ENST00000567138 LCHNA4D1U4 455 aa13.28□□□□□ -0.28
SPG7-216ENST00000567138 KIF28PB7ZC32 967 aa13.28□□□□□ -0.28
SPG7-216ENST00000567138 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
SPG7-216ENST00000567138 LPXNO60711 386 aa13.28□□□□□ -0.28
SPG7-216ENST00000567138 PPP4R3BQ5MIZ7 849 aa13.28□□□□□ -0.28
SPG7-216ENST00000567138 NFRKBQ6P4R8 1299 aa13.28□□□□□ -0.28
SPG7-216ENST00000567138 C11orf16Q9NQ32 467 aa13.28□□□□□ -0.28
SPG7-216ENST00000567138 NOD1Q9Y239 953 aa13.28□□□□□ -0.28
SPG7-216ENST00000567138 FRMPD2Q68DX3 1309 aaPredicted RBP13.28□□□□□ -0.28
SPG7-216ENST00000567138 RAD50Q92878 1312 aa13.28□□□□□ -0.28
SPG7-216ENST00000567138 ATG2AQ2TAZ0 1938 aa13.27□□□□□ -0.28
SPG7-216ENST00000567138 FOXP2O15409 715 aa13.27□□□□□ -0.29
SPG7-216ENST00000567138 RANBP6O60518 1105 aaKnown RBP13.27□□□□□ -0.29
SPG7-216ENST00000567138 KCNJ6P48051 423 aa13.27□□□□□ -0.29
SPG7-216ENST00000567138 PDE4DQ08499 809 aa13.27□□□□□ -0.29
SPG7-216ENST00000567138 BFSP2Q13515 415 aa13.27□□□□□ -0.29
SPG7-216ENST00000567138 BRDTQ58F21 947 aaPredicted RBP13.27□□□□□ -0.29
SPG7-216ENST00000567138 SYDE2Q5VT97 1194 aa13.27□□□□□ -0.29
SPG7-216ENST00000567138 SMC5Q8IY18 1101 aa13.27□□□□□ -0.29
SPG7-216ENST00000567138 DCAF4Q8WV16 495 aa13.27□□□□□ -0.29
SPG7-216ENST00000567138 FSD1Q9BTV5 496 aa13.27□□□□□ -0.29
SPG7-216ENST00000567138 BAIAP3O94812 1187 aa13.26□□□□□ -0.29
SPG7-216ENST00000567138 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
SPG7-216ENST00000567138 DEFB103AP81534 67 aa13.26□□□□□ -0.29
SPG7-216ENST00000567138 LRRFIP1Q32MZ4 808 aaKnown RBP13.26□□□□□ -0.29
SPG7-216ENST00000567138 ZMYM1Q5SVZ6 1142 aa13.26□□□□□ -0.29
SPG7-216ENST00000567138 ANKRD45Q5TZF3 282 aa13.26□□□□□ -0.29
SPG7-216ENST00000567138 B4GALNT3Q6L9W6 998 aa13.26□□□□□ -0.29
SPG7-216ENST00000567138 CLEC4DQ8WXI8 215 aa13.26□□□□□ -0.29
SPG7-216ENST00000567138 GPCPD1Q9NPB8 672 aa13.26□□□□□ -0.29
SPG7-216ENST00000567138 CD320Q9NPF0 282 aa13.26□□□□□ -0.29
SPG7-216ENST00000567138 MTUS1Q9ULD2 1270 aa13.26□□□□□ -0.29
SPG7-216ENST00000567138 LOC102724159A0A0B4J2E5 919 aa13.25□□□□□ -0.29
SPG7-216ENST00000567138 NKRFO15226 690 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPG7-216ENST00000567138 GPR37L1O60883 481 aa13.25□□□□□ -0.29
SPG7-216ENST00000567138 ARIH2O95376 493 aa13.25□□□□□ -0.29
SPG7-216ENST00000567138 PTPN11Q06124 597 aaPredicted RBP13.25□□□□□ -0.29
SPG7-216ENST00000567138 PWP2Q15269 919 aaKnown RBP13.25□□□□□ -0.29
SPG7-216ENST00000567138 PTGISQ16647 500 aa13.25□□□□□ -0.29
SPG7-216ENST00000567138 BTNL9Q6UXG8 535 aa13.25□□□□□ -0.29
SPG7-216ENST00000567138 RNF207Q6ZRF8 634 aa13.25□□□□□ -0.29
SPG7-216ENST00000567138 SCFD2Q8WU76 684 aa13.25□□□□□ -0.29
SPG7-216ENST00000567138 CCDC136Q96JN2 1154 aa13.25□□□□□ -0.29
SPG7-216ENST00000567138 ZBED2Q9BTP6 218 aa13.25□□□□□ -0.29
SPG7-216ENST00000567138 PPP4R2Q9NY27 417 aa13.25□□□□□ -0.29
SPG7-216ENST00000567138 ARIH1Q9Y4X5 557 aaPredicted RBP13.25□□□□□ -0.29
SPG7-216ENST00000567138 PIEZO1Q92508 2521 aa13.25□□□□□ -0.29
SPG7-216ENST00000567138 A6NJR5 290 aa13.24□□□□□ -0.29
SPG7-216ENST00000567138 KPNA6O60684 536 aa13.24□□□□□ -0.29
SPG7-216ENST00000567138 TXNP10599 105 aaKnown RBP13.24□□□□□ -0.29
SPG7-216ENST00000567138 EDNRBP24530 442 aa13.24□□□□□ -0.29
SPG7-216ENST00000567138 RPS6P62753 249 aaKnown RBP13.24□□□□□ -0.29
SPG7-216ENST00000567138 TCTN1Q2MV58 587 aa13.24□□□□□ -0.29
SPG7-216ENST00000567138 GDF6Q6KF10 455 aaPredicted RBP13.24□□□□□ -0.29
SPG7-216ENST00000567138 TTC41PQ6P2S7 1318 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms